prot_H-paniculata_contig311.8410.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig311.8410.1
Unique Nameprot_H-paniculata_contig311.8410.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length187
Homology
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BLAST of mRNA_H-paniculata_contig311.8410.1 vs. uniprot
Match: A0A6H5JDQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ5_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.420e-50
Identity = 118/193 (61.14%), Postives = 133/193 (68.91%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSSGESISKLKGMLTAAQEANPPTKPQSRSGFSFRHPDAPPPYESVSDDEPPVPSPRSSRPRGRARS----LSDAEASMVSDDIAMGDAD---EPSTAGTKGAEPGIGKXXXXXXXTTEERRRANENILKSKKQKRQAKRRGWVEFPAAEN 186
            MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFS+GES++KLKGMLTAAQ ANPP+K  S+SGFSFRHPDAPPP++   ++                      LSDAEASMV +D AMGDA    E               XXXXXXX   ER  A++   K KK++RQAKRR +VEFPA EN
Sbjct:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPPFDDDKNEATXXXXXXXXXXXXXXXXXXXXLSDAEASMVDEDTAMGDAGDGGEXXXXXXXXXXXXXXXXXXXXXXXXGERNTASDVAAKLKKKRRQAKRRNYVEFPAHEN 193
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BLAST of mRNA_H-paniculata_contig311.8410.1 vs. uniprot
Match: D7G0M3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M3_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 1.120e-43
Identity = 94/141 (66.67%), Postives = 102/141 (72.34%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSSGESISKLKGMLTAAQEANPPTKPQSRSGFSFRHPDAPPPYESVSDDEPPVPSPRSSRPRGRARS-------LSDAEASMVSDDIAMGDADEPSTAG 134
            MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFS+GES++KLKGMLTAAQ ANPP+K  S+SGFSFRHPDAPP ++   DD                         LSDAEASMV +D AMGDA E    G
Sbjct:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPLFD---DDNXXXXXXXXXXXXXXXXXXXXXXXXLSDAEASMVDEDTAMGDAGEEDAGG 138
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BLAST of mRNA_H-paniculata_contig311.8410.1 vs. uniprot
Match: A0A835Z2D3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D3_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 4.690e-18
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSSGESISKLKGMLTAAQEANPPTKPQSRSGFSFRHPDAPP 83
            MAKSIRSKVKKRNR +MRK  G+PH +++QA+CTA++Q++V + SG  I+KLKG+L  AQ  NP     S+   +F+HP A P
Sbjct:    1 MAKSIRSKVKKRNRADMRKQYGEPHAQQIQAKCTARLQETVQYHSGPGINKLKGLLNKAQAENPLQPEVSKHSHTFKHPYAKP 83
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig311.8410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JDQ5_9PHAE1.420e-5061.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0M3_ECTSI1.120e-4366.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z2D3_9STRA4.690e-1854.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 156..176
IPR019434Uncharacterised protein family UPF0642PFAMPF10338DUF2423coord: 1..41
e-value: 1.5E-8
score: 34.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig311contigH-paniculata_contig311:1066..9596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig311.8410.1mRNA_H-paniculata_contig311.8410.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig311 330..9799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig311.8410.1 ID=prot_H-paniculata_contig311.8410.1|Name=mRNA_H-paniculata_contig311.8410.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSSGESIS
KLKGMLTAAQEANPPTKPQSRSGFSFRHPDAPPPYESVSDDEPPVPSPRS
SRPRGRARSLSDAEASMVSDDIAMGDADEPSTAGTKGAEPGIGKGKGDGE
GTTEERRRANENILKSKKQKRQAKRRGWVEFPAAEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019434UPF0642