prot_H-paniculata_contig31062.8402.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31062.8402.1
Unique Nameprot_H-paniculata_contig31062.8402.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
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BLAST of mRNA_H-paniculata_contig31062.8402.1 vs. uniprot
Match: D8LC71_ECTSI (Protein CASP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC71_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 2.320e-36
Identity = 86/122 (70.49%), Postives = 94/122 (77.05%), Query Frame = 0 
Query:    1 MLRAFQSGPVAKQFGKLMDRRKNLEGNSSNAHADDFR--DDDLLDPTEEQ---EAGANPEGFSPADRLLAAVKRQRERFRKEALRREREASIAKGNAEQLTRDNQELRRENMHLYKKIRCAM 117
            MLRAFQSGPVAKQFGKL+ RR ++ G      ADD    +DDLL+  EE    E     EGFS ADRLL AVKRQRERFRKEALRREREASIAKGNAEQLTRDNQ+LRRENMHLYK++R  M
Sbjct:  534 MLRAFQSGPVAKQFGKLIGRRGDVGGG-----ADDVGPLEDDLLEGVEEAGGVEGVPGAEGFSAADRLLGAVKRQRERFRKEALRREREASIAKGNAEQLTRDNQDLRRENMHLYKRMRFVM 650
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BLAST of mRNA_H-paniculata_contig31062.8402.1 vs. uniprot
Match: A0A836CBY3_9STRA (Protein CASP n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.850e-10
Identity = 36/71 (50.70%), Postives = 52/71 (73.24%), Query Frame = 0 
Query:   44 PTEEQEAGANPEGFSPADRLLAAVKRQRERFRKEALRREREASIAKGNAEQLTRDNQELRRENMHLYKKIR 114
            P  E+   A  EG SPADR+LAAV+RQR RFRK+AL +E E ++ +   EQL + NQE++R+N+ LY+++R
Sbjct:  648 PDLEEGEDAILEGCSPADRMLAAVQRQRSRFRKQALAKEAELALQRSTIEQLQQQNQEVQRDNLALYRRLR 718
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31062.8402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC71_ECTSI2.320e-3670.49Protein CASP n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A836CBY3_9STRA3.850e-1050.70Protein CASP n=1 Tax=Tribonema minus TaxID=303371 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..112
IPR012955CASP, C-terminalPFAMPF08172CASP_Ccoord: 43..114
e-value: 7.1E-9
score: 35.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31062contigH-paniculata_contig31062:401..1928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31062.8402.1mRNA_H-paniculata_contig31062.8402.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31062 389..1928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31062.8402.1 ID=prot_H-paniculata_contig31062.8402.1|Name=mRNA_H-paniculata_contig31062.8402.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MLRAFQSGPVAKQFGKLMDRRKNLEGNSSNAHADDFRDDDLLDPTEEQEA
GANPEGFSPADRLLAAVKRQRERFRKEALRREREASIAKGNAEQLTRDNQ
ELRRENMHLYKKIRCAM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012955CASP_C