prot_H-paniculata_contig31040.8397.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31040.8397.1
Unique Nameprot_H-paniculata_contig31040.8397.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length129
Homology
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BLAST of mRNA_H-paniculata_contig31040.8397.1 vs. uniprot
Match: D7G753_ECTSI (Tetratricopeptide domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G753_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 6.970e-34
Identity = 68/124 (54.84%), Postives = 90/124 (72.58%), Query Frame = 0 
Query:    5 SISAIESKFRKAASDHPDDVFSLAALAQLLADLGRQDEAARYFEKAIQ--HGSEKYILTDRSFCCEEALALAMGWYAALVEGNGTEGSVKAEALYKRVLALNPQDCLSMGNYAMFLHRIKKDYK 126
            ++ ++ES FR A +   +DVF+L ALA LLADLGR DEA  +FEKA++  H + K+          E   LAMGWYAALVEGNG+EG+VKAE LYKR L +N +D L+MGNYA+FLH+IK+D++
Sbjct:   14 AVDSVESSFRAAVAKQ-EDVFTLTALAHLLADLGRNDEAGSFFEKALKCPHHATKHGSPSSD---GETRGLAMGWYAALVEGNGSEGAVKAEGLYKRALRINDRDALAMGNYAVFLHKIKRDHR 133
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BLAST of mRNA_H-paniculata_contig31040.8397.1 vs. uniprot
Match: A0A835YUW1_9STRA (Tetratricopeptide domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW1_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.080e-24
Identity = 60/121 (49.59%), Postives = 76/121 (62.81%), Query Frame = 0 
Query:    4 PSISAIESKFRKAASDHPDDVFSLAALAQLLADLGRQDEAARYFEKAIQHGSEKYILTDRSFCCEEALALAMGWYAALVEGNGTEGSVKAEALYKRVLALNPQDCLSMGNYAMFLHRIKKD 124
            P+I+ + + F  A     +DVFSL+A AQ+L   G  D A  +F+KAI  G       D     EE L L +GWYA LVEG G  G+ +AEALY+R L L P+D LSMGNYA+FLHRIK+D
Sbjct:   25 PTIAELRAPF-DARLQQQEDVFSLSAYAQVLLATGDIDGAECHFKKAIDAGE------DAGPEAEETLCLTLGWYAGLVEGRGKTGAAQAEALYRRALRLRPRDPLSMGNYAVFLHRIKRD 138
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31040.8397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G753_ECTSI6.970e-3454.84Tetratricopeptide domain-containing protein n=1 Ta... [more]
A0A835YUW1_9STRA1.080e-2449.59Tetratricopeptide domain-containing protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 10..126
e-value: 3.6E-13
score: 51.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 13..122
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..57
score: 9.53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31040contigH-paniculata_contig31040:280..666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31040.8397.1mRNA_H-paniculata_contig31040.8397.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31040 280..666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31040.8397.1 ID=prot_H-paniculata_contig31040.8397.1|Name=mRNA_H-paniculata_contig31040.8397.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp
MYPPSISAIESKFRKAASDHPDDVFSLAALAQLLADLGRQDEAARYFEKA
IQHGSEKYILTDRSFCCEEALALAMGWYAALVEGNGTEGSVKAEALYKRV
LALNPQDCLSMGNYAMFLHRIKKDYKVRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom