prot_H-paniculata_contig3070.8322.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3070.8322.1
Unique Nameprot_H-paniculata_contig3070.8322.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length631
Homology
BLAST of mRNA_H-paniculata_contig3070.8322.1 vs. uniprot
Match: D8LAT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT1_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 4.560e-93
Identity = 235/584 (40.24%), Postives = 299/584 (51.20%), Query Frame = 0
Query:   47 LVFAKGEGESGKPPAEPEPTLPSGFSAILNAEEEEIYPADAKIRVVLAEGSLGGRGRRQAAELHQSLQQVVATAAIYSHLIRKHGSSGISRRRSASDAGSGEARGVAVPVR------CGCGGADGPCKAISNLLRDELAKVTDVAEAERRGALLKKLRQAERRSGGLCNPAQLHR-------EASTSSLNAADPLPDLSGAVPVAPVAPV---LDSPRRGLSSWGGGMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGSSPVGVVSKRPADVPWADNMLTAVNRKRHGSMLKARGRDLAKRLSVIVPPAAGELQAVAARLPPWGEIDTEGEGASVSFQKGRWLCRGGVQQLSLHGNTKGNSHIHSNNSANRTTNPSGPVTSTQSPADQPPASXXXXXXXXXXXXXVSSSLPPAPSRAATVPLENDPKFTQPKAIFGTNEGARR--GSRLGPSLGSDGGELVVVD---------ARKQQQDWKLSAQELSMINKEEELVMPPEVLGKLLSAGAVIESHQQRDFWDIFSRLEIVTRTEALLNIALRGGKGCPARAGRMGRELCMSLTSVVLDAIAAVK 603
            LVFA+ +  +  P +EPEPTLPSGFSA LNAEEE+IYPA+AKIRV++AEGSL GR RRQAAELHQ+LQQVV  AAIY+HL+ KHG  G   +   +   +G A  VA   +      CGCGG  G CKAIS+LL+ E+ KV   AE ER+G +LKK +Q ERRSGGLCNP  L         E S  S  +A             P +P     D+  R L+S                                        G G S  G VS    DVPWA++ML    RKRH ++LK RGR LAK L+ ++   + +   VA+RLPPW E + + E      ++G  L R            +   +I S  +                       S             +S S   AP+ AA++          P A            GS   P+                      R ++QDWKLSAQELS+I KEEE VM P+VL  LL+ GA +   QQ DFWD+F+RLE+ TRTEALLNIA+RGG+GC AR+GRMGRELC++LTSVVL+A+ AV+
Sbjct:   47 LVFARAKEPA--PASEPEPTLPSGFSATLNAEEEKIYPAEAKIRVLVAEGSLLGRNRRQAAELHQALQQVVGAAAIYNHLLVKHGGLGTKPKECKTSNDTGAAAAVAGTEKNDNRMVCGCGGGSGSCKAISSLLKSEMDKVVAAAEKERKGEMLKKFKQVERRSGGLCNPDLLENIVRSTGGEGSGESSPSAXXXXXXXXXXXXPPRSPDHKGQDAAIRALNS-------------------------LVVVDVEKDERGGIAGVGGSG-GAVSSGAQDVPWAEDMLCRSVRKRHAAVLKTRGRALAKGLARMLKGVSNDXXXVASRLPPWEECEDDDEDKPTPQEEGAELDR-----------IRSRGNIFSAPTHEXXXXXXXXXXXXXXXXXXXXXSYVSAATSEDGNERLSLSSDTAPT-AASISSNGSAAIRSPVAAMAXXXXXXXSPGSDAVPAAXXXXXXXXXXXXXXXXAANCVRSRRQDWKLSAQELSLIKKEEERVMKPDVLTTLLAKGASLGCLQQADFWDVFARLEVATRTEALLNIAIRGGRGCAARSGRMGRELCINLTSVVLEALNAVE 590          
BLAST of mRNA_H-paniculata_contig3070.8322.1 vs. uniprot
Match: A0A6H5KYX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX3_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 9.200e-41
Identity = 153/460 (33.26%), Postives = 201/460 (43.70%), Query Frame = 0
Query:  180 KVTDVAEAERRGALLKKLRQAERRSGGLCNPAQLHR-------EASTSSLNAADPLPDLSGAVPVAPVAPV---LDSPRRGLSSWGGGMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGSSPVGVVSKRPADVPWADNMLTAVNRKRHGSMLKARGRDLAKRLSVIVPPAAGELQAVAARLPPWGEIDTEGE----GASVSFQKGRWLCRGGVQQLSLHGNTKGNSHIHSNNSANRTTNPSGPVTSTQSPADQPPASXXXXXXXXXXXXXVSSSLPPAPSRAATVPLENDPKFTQPKAIFGTNEGARRGSRLGPSLGSDGGELVV------------VDARKQQQDWKLSAQELSMINKEEELVMPPEVLGKLLSAGAVIESHQQRDFWDIFSRLEIVTRTEALLNIALRGGKGCPARAGRMGRELCMSLTSVVLDAIAAVKKKQDLMPTHA 613
            KV   AE ER+G +LKK +Q ERRSGGLCNP  L         E S  S  +A             P +P     D+  R L+S                                        G G S  GV S    DVPWA++ML    RKRH ++LK RGR LAK L+ ++   + +L+ VA+RLPPW E + + E    G     ++ R L  G +     H                        V++  S                     +S S   AP+ A+                                                      V++R+Q  DWKLSAQELS+I KEEE VM P+VL  LL+ GA +   QQ DFWD+F+RLE+ TRTEALLNIA+RGG+GC AR+GRMGRELC++LTSVVL+A+ AV++ Q     H+
Sbjct:    3 KVVAAAEKERKGEMLKKFKQVERRSGGLCNPDLLENIVRSTGGEGSGESSPSAXXXXXXXXXXXXPPRSPDHKGQDAAIRALNS-------------------------LVVVDVEKDERGGVAGVGGSGGGV-SSGAQDVPWAEDMLCRSVRKRHAAVLKTRGRALAKGLARMLKGVSNDLKGVASRLPPWEECEDDDEDKPXGGGAELERIRSL--GNIFSAPTHEXXXXXXXXXXXXXXXXXXXXXSCVSAVTS---------------EDGNERLSLSSDNAPTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADCVNSRRQ--DWKLSAQELSLIKKEEERVMKPDVLTTLLAKGASLGCLQQADFWDVFARLEVATRTEALLNIAIRGGRGCAARSGRMGRELCINLTSVVLEALNAVEQAQRKAQLHS 417          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3070.8322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAT1_ECTSI4.560e-9340.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYX3_9PHAE9.200e-4133.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3070contigH-paniculata_contig3070:7414..18386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3070.8322.1mRNA_H-paniculata_contig3070.8322.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3070 7414..18386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3070.8322.1 ID=prot_H-paniculata_contig3070.8322.1|Name=mRNA_H-paniculata_contig3070.8322.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=631bp
MVAVDDDDDFIVQPPGEGDGAEAADGSNRGQQQQGASRYFLQGFRRLVFA
KGEGESGKPPAEPEPTLPSGFSAILNAEEEEIYPADAKIRVVLAEGSLGG
RGRRQAAELHQSLQQVVATAAIYSHLIRKHGSSGISRRRSASDAGSGEAR
GVAVPVRCGCGGADGPCKAISNLLRDELAKVTDVAEAERRGALLKKLRQA
ERRSGGLCNPAQLHREASTSSLNAADPLPDLSGAVPVAPVAPVLDSPRRG
LSSWGGGMAALATAASAAGSPPLLSLGGNHSSSGSSGSSGGGSGAGSSPV
GVVSKRPADVPWADNMLTAVNRKRHGSMLKARGRDLAKRLSVIVPPAAGE
LQAVAARLPPWGEIDTEGEGASVSFQKGRWLCRGGVQQLSLHGNTKGNSH
IHSNNSANRTTNPSGPVTSTQSPADQPPASSAQHSSSSSNGSAVSSSLPP
APSRAATVPLENDPKFTQPKAIFGTNEGARRGSRLGPSLGSDGGELVVVD
ARKQQQDWKLSAQELSMINKEEELVMPPEVLGKLLSAGAVIESHQQRDFW
DIFSRLEIVTRTEALLNIALRGGKGCPARAGRMGRELCMSLTSVVLDAIA
AVKKKQDLMPTHAPTAAVQQHQSPENKEEDR
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