prot_H-paniculata_contig30694.8312.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30694.8312.1
Unique Nameprot_H-paniculata_contig30694.8312.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length52
Homology
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BLAST of mRNA_H-paniculata_contig30694.8312.1 vs. uniprot
Match: D7FQ13_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ13_ECTSI)

HSP 1 Score: 47.0 bits (110), Expect = 8.120e-5
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 0 
Query:    1 EQVTTAGEIKGNQSGEFVPVLALDCRAGRMAPID 34
            ++VTT G IKG+QSGEFVP+ ALDCR   + PI+
Sbjct:   80 KKVTTQGLIKGDQSGEFVPIFALDCRG--LEPIE 111
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30694.8312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ13_ECTSI8.120e-561.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30694contigH-paniculata_contig30694:1636..2705 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30694.8312.1mRNA_H-paniculata_contig30694.8312.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30694 797..2705 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30694.8312.1 ID=prot_H-paniculata_contig30694.8312.1|Name=mRNA_H-paniculata_contig30694.8312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp
EQVTTAGEIKGNQSGEFVPVLALDCRAGRMAPIDGLHGDERGRERVRIGR
S*
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