prot_H-paniculata_contig3058.8285.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3058.8285.1
Unique Nameprot_H-paniculata_contig3058.8285.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length142
Homology
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BLAST of mRNA_H-paniculata_contig3058.8285.1 vs. uniprot
Match: D7G6Y5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y5_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 5.970e-11
Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 0 
Query:    1 MFRGALVGLIALVASANAFIGLVP--AVPRTQSCAGALKMVTQPQVSAPSSAKMPPSLEPVYTETLQKMEKEAMSELEKTFDEIAKKAEAESEALW 94
            M R A V ++AL ASANAF+  VP  ++ RT   +  ++MVT    +  +      S E  YT  L+KME E+++ELEK F+E AKKA+AES+ +W
Sbjct:    1 MVRTAFVSVVALSASANAFLAPVPGYSLARTSRASAPIQMVTSATPAVSTGEGKMVSNEETYTAALKKMEAESLAELEKAFEETAKKAKAESDKIW 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3058.8285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6Y5_ECTSI5.970e-1143.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..92
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..141
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..18
score: 0.659
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3058contigH-paniculata_contig3058:15646..16908 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3058.8285.1mRNA_H-paniculata_contig3058.8285.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3058 14127..17846 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3058.8285.1 ID=prot_H-paniculata_contig3058.8285.1|Name=mRNA_H-paniculata_contig3058.8285.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp
MFRGALVGLIALVASANAFIGLVPAVPRTQSCAGALKMVTQPQVSAPSSA
KMPPSLEPVYTETLQKMEKEAMSELEKTFDEIAKKAEAESEALWDPVNKD
VEKLEKENAGQSTFLEEAMKKIPMLPGYTPPFMDVVDTPSK*
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