prot_H-paniculata_contig30453.8251.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30453.8251.1
Unique Nameprot_H-paniculata_contig30453.8251.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length141
Homology
BLAST of mRNA_H-paniculata_contig30453.8251.1 vs. uniprot
Match: A0A485L7G2_9STRA (Aste57867_16617 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7G2_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.390e-6
Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   56 EESWICDSGATGHATPSAANMSSYRQVKETLRIASGQVIPIVGRGNLNMTFRTSKGFVPLSVL--NVA-----HAPELHYNLFSL 133
            ++ WI DSGAT   TP+    S Y   K++LR+A G+++ ++G G L + F  S+   P  V   NV      H P+L +NL S+
Sbjct:  362 KDHWIIDSGATASTTPTRTFFSKYVPCKQSLRVADGKMLAVIGYGELCLRFNLSEPDPPAQVRKGNVLFTFGLHCPDLKFNLLSV 446          
BLAST of mRNA_H-paniculata_contig30453.8251.1 vs. uniprot
Match: A0A445M2Q0_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445M2Q0_GLYSO)

HSP 1 Score: 55.5 bits (132), Expect = 3.690e-6
Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   57 ESWICDSGATGHATPSAANMSSYRQVK-ETLRIASGQVIPIVGRGNLNMTFRTSKGFVPLSVLNVAHAPELHYNLFSLRKVADAGN 141
            +SWI DSGA+ H TPS   +S+Y   +   + +A G+ + IVGRG++N+  +TS G +  ++ NV H P L  NL S+ ++ D G+
Sbjct:  265 DSWIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINI--KTSSGSL-WTLHNVRHIPALKRNLISIGQLDDEGH 347          
BLAST of mRNA_H-paniculata_contig30453.8251.1 vs. uniprot
Match: A0A445M280_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445M280_GLYSO)

HSP 1 Score: 55.5 bits (132), Expect = 3.770e-6
Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   57 ESWICDSGATGHATPSAANMSSYRQVK-ETLRIASGQVIPIVGRGNLNMTFRTSKGFVPLSVLNVAHAPELHYNLFSLRKVADAGN 141
            +SWI DSGA+ H TPS   +S+Y   +   + +A G+ + IVGRG++N+  +TS G +  ++ NV H P L  NL S+ ++ D G+
Sbjct: 1161 DSWIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINI--KTSSGSL-WTLHNVRHIPALKRNLISIGQLDDEGH 1243          
BLAST of mRNA_H-paniculata_contig30453.8251.1 vs. uniprot
Match: H3H469_PHYRM (Retrotran_gag_3 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H469_PHYRM)

HSP 1 Score: 53.1 bits (126), Expect = 2.110e-5
Identity = 29/85 (34.12%), Postives = 48/85 (56.47%), Query Frame = 0
Query:   56 EESWICDSGATGHATPSAANMSSYRQV-KETLRIASGQVIPIVGRGNLNMTFRTSKGFVPL-SVLNVAHAPELHYNLFSLRKVAD 138
            + +W  DSG T + T S       + +  +T+ +     IPI+G+G +NMT   +KG   + S+ +V +APEL +NL S+R+  D
Sbjct:  378 DPAWTIDSGCTRYVTSSPHWFEDLKPIIGKTITVGGNHQIPILGKGTVNMTVTDTKGSKRIISLSDVLYAPELKFNLLSVRQAVD 462          
BLAST of mRNA_H-paniculata_contig30453.8251.1 vs. uniprot
Match: A0A151QVU7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QVU7_CAJCA)

HSP 1 Score: 51.2 bits (121), Expect = 9.710e-5
Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 0
Query:   57 ESWICDSGATGHATPSAANMSSYRQVK-ETLRIASGQVIPIVGRGNLNMTFRTSKGFVPLSVLNVAHAPELHYNLFSLRKVADAGN 141
            ESWI DSGA+ H TPS   +++Y   +   + +A G+ + IVG+G++    RTS G    ++ NV H P L  NL S+ ++ D G+
Sbjct:  288 ESWIMDSGASFHTTPSNELLTNYVSGRFGKVYLADGKPLNIVGKGDI--AIRTSSGS-HWTLKNVRHIPALKRNLISVGQLDDEGH 370          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30453.8251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A485L7G2_9STRA2.390e-636.47Aste57867_16617 protein n=1 Tax=Aphanomyces stella... [more]
A0A445M2Q0_GLYSO3.690e-639.53Retrovirus-related Pol polyprotein from transposon... [more]
A0A445M280_GLYSO3.770e-639.53Retrovirus-related Pol polyprotein from transposon... [more]
H3H469_PHYRM2.110e-534.12Retrotran_gag_3 domain-containing protein n=1 Tax=... [more]
A0A151QVU7_CAJCA9.710e-538.37Retrovirus-related Pol polyprotein from transposon... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30453contigH-paniculata_contig30453:1226..1865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30453.8251.1mRNA_H-paniculata_contig30453.8251.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30453 1209..1865 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30453.8251.1 ID=prot_H-paniculata_contig30453.8251.1|Name=mRNA_H-paniculata_contig30453.8251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=141bp
MGQQARRRKERFQEVLQERSSVQEQQLRTSIYEFSSEFGLFIHVGKSGEL
GVGVEEESWICDSGATGHATPSAANMSSYRQVKETLRIASGQVIPIVGRG
NLNMTFRTSKGFVPLSVLNVAHAPELHYNLFSLRKVADAGN
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