prot_H-paniculata_contig3012.8173.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3012.8173.1
Unique Nameprot_H-paniculata_contig3012.8173.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length201
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3012.8173.1 vs. uniprot
Match: A0A6H5JQP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQP5_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.480e-8
Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = 0 
Query:    6 MNSMPPAPIFGVADGGSGT--MSN-KFINIDEIFADCFIEGENNDLLEMESGPTGAE 59
            +NSMPPAPIFGV  GG G   M N KFINIDEIFADCF++G++ DLL +  G TGA+
Sbjct:    7 VNSMPPAPIFGVTPGGDGNGGMGNSKFINIDEIFADCFMDGDS-DLLGL--GGTGAQ 60
[Close]
BLAST of mRNA_H-paniculata_contig3012.8173.1 vs. uniprot
Match: A0A835YVH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH1_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 7.640e-5
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:    1 MDQGPMNSMPPAPIFGVADGGSGTMSNKFINIDEIFADCFIEGENNDLLEMESGPT-----GAEPAGGGDGTS 68
            M+   ++S P  P+FG+A G  G   NK+INIDEIFADCF+E +  DL+ + +G T       +  GGG G S
Sbjct:    1 MEASGLSSTPQPPLFGMAGGTDGAQ-NKYINIDEIFADCFMESDP-DLMTLMAGQTDKAGQAQQGLGGGAGAS 71
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3012.8173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQP5_9PHAE1.480e-864.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YVH1_9STRA7.640e-543.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3012contigH-paniculata_contig3012:15658..16260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3012.8173.1mRNA_H-paniculata_contig3012.8173.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3012 8525..16260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3012.8173.1 ID=prot_H-paniculata_contig3012.8173.1|Name=mRNA_H-paniculata_contig3012.8173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
MDQGPMNSMPPAPIFGVADGGSGTMSNKFINIDEIFADCFIEGENNDLLE
MESGPTGAEPAGGGDGTSGGAIGSFGGVGGGGNGPSGQDIMGGVKSMGAF
GSGIGIGGVMGEAGVAGQSGGGGSGGILQQQQQQQQRRGDLHRGNNQLVG
FSPFSAADRGTTTAPTTAGVGSSGGVLSGRRTSGAARAGTGGSGAAGGVS
G
back to top