prot_H-paniculata_contig29356.8001.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29356.8001.1
Unique Nameprot_H-paniculata_contig29356.8001.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length195
Homology
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BLAST of mRNA_H-paniculata_contig29356.8001.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 1.070e-6
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    7 KKCFHEGCSIHPSYGVVGTKKAEYCARHAGDGMVNVS 43
            ++C HE C  HP+YGV GT+KAE+CA HA DGMV+ S
Sbjct:   15 RRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGMVSGS 51
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BLAST of mRNA_H-paniculata_contig29356.8001.1 vs. uniprot
Match: D8LCH9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH9_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 5.430e-5
Identity = 21/42 (50.00%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:    1 MAQMLSKKCFHEGCSIHPSYGVVGTKKAEYCARHAGDGMVNV 42
            M  + +K C H GC+   ++GV G+KKAE+C+RHA DGMV++
Sbjct:    1 MIHVRAKTCDHVGCTTRANFGVPGSKKAEFCSRHAEDGMVDL 42
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29356.8001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LBM3_9PHAE1.070e-662.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCH9_ECTSI5.430e-550.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29356contigH-paniculata_contig29356:557..1141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29356.8001.1mRNA_H-paniculata_contig29356.8001.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29356 510..1455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29356.8001.1 ID=prot_H-paniculata_contig29356.8001.1|Name=mRNA_H-paniculata_contig29356.8001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MAQMLSKKCFHEGCSIHPSYGVVGTKKAEYCARHAGDGMVNVSTGKSTSS
SRRLKKRSSRSRVKLEVAPQNVDDNGGYSEILEKSRKRHAAPTVPSHSVS
SASRESHSAKQARTSNRLSVSEELTLCKPSPDVSPLDDRAMVKMEVAASR
CSVPELIFAAALTTAGHGGIESDGELKHDKVVDNNDAAVFRIQT*
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