prot_H-paniculata_contig2933.7997.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2933.7997.1
Unique Nameprot_H-paniculata_contig2933.7997.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length118
Homology
BLAST of mRNA_H-paniculata_contig2933.7997.1 vs. uniprot
Match: D8LCD1_ECTSI (Ribosomal protein L34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCD1_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 1.810e-61
Identity = 97/119 (81.51%), Postives = 107/119 (89.92%), Query Frame = 0
Query:    1 MVRGDGRVTYSRRHAYHTKSNKMKVVKTPGGKLVAHFHKKSAKGARCGD--CGITLPGIKHLRPKQYKNLKKREKTVSRSYGGSRCAGCVRQRVVRAFLIEEQKIVKQVLLEKQKKKKS 117
            MVRGDGR+TY+RRHAYHTKSNK K VKTPGGKLVAH+ KKSAKG  C D  C + LPGIKH+RPK+YKNLKKR+KTVSR+YGGS CA CVRQRVVRAFLIEEQKIVK+VLLEKQKKKK+
Sbjct:   19 MVRGDGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGVHCADASCSVALPGIKHMRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 137          
BLAST of mRNA_H-paniculata_contig2933.7997.1 vs. uniprot
Match: A0A6V2RVW8_HETAK (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A6V2RVW8_HETAK)

HSP 1 Score: 176 bits (445), Expect = 7.110e-55
Identity = 85/113 (75.22%), Postives = 98/113 (86.73%), Query Frame = 0
Query:    5 DGRVTYSRRHAYHTKSNKMKVVKTPGGKLVAHFHKKSAKGARCGDCGITLPGIKHLRPKQYKNLKKREKTVSRSYGGSRCAGCVRQRVVRAFLIEEQKIVKQVLLEKQKKKKS 117
            D RV Y+RRH Y TKSNK+K+ KTPGG+LVAH+HKK A G +C DCG  L GIKHLRPKQYKNLKKREKTVSR+YGGS CAGCVRQR+VRAFLIEEQKIVK++++EK KK K+
Sbjct:    4 DIRVQYTRRHCYATKSNKVKITKTPGGRLVAHYHKKKAAGPKCSDCGTVLAGIKHLRPKQYKNLKKREKTVSRAYGGSACAGCVRQRIVRAFLIEEQKIVKKMIMEKMKKAKA 116          
BLAST of mRNA_H-paniculata_contig2933.7997.1 vs. uniprot
Match: A0A835ZPJ0_9STRA (Ribosomal protein L34e-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPJ0_9STRA)

HSP 1 Score: 169 bits (427), Expect = 3.690e-52
Identity = 86/112 (76.79%), Postives = 96/112 (85.71%), Query Frame = 0
Query:    4 GDGRVTYSRRHAYHTKSNKMKVVKTPGGKLVAHFHKKSAKGARCGDCGITLPGIKHLRPKQYKNLKKREKTVSRSYGGSRCAGCVRQRVVRAFLIEEQKIVKQVLLEKQKKK 115
            GD RVTY+RRHAY T SNK+KVV+TPGGK VAH+ KK A G +CGDC I LPGI  LRPK+YKNLK+REKTVSR+YGGSRCA CVRQRVVRAFLIEEQKIVK++L EK K K
Sbjct:    3 GDKRVTYTRRHAYATASNKIKVVRTPGGKHVAHYRKKKANGPKCGDCKIALPGIACLRPKEYKNLKRREKTVSRAYGGSRCAACVRQRVVRAFLIEEQKIVKKLLAEKIKGK 114          
BLAST of mRNA_H-paniculata_contig2933.7997.1 vs. uniprot
Match: A0A7S2UXI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXI2_9STRA)

HSP 1 Score: 165 bits (418), Expect = 9.240e-51
Identity = 79/112 (70.54%), Postives = 97/112 (86.61%), Query Frame = 0
Query:    5 DGRVTYSRRHAYHTKSNKMKVVKTPGGKLVAHFHKKSAKGARCGDCGITLPGIKHLRPKQYKNLKKREKTVSRSYGGSRCAGCVRQRVVRAFLIEEQKIVKQVLLEKQKKKK 116
            D RV Y RRH+Y TKSNK+K+VKTPGG+LVAH+H K AKG +C +CGI+LPGIKH+RP +YKN+KKREKTV+R+YGGS C  CV+ R+VRAFLIEEQKIVK+++ EK KKKK
Sbjct:    4 DIRVQYRRRHSYATKSNKIKIVKTPGGRLVAHYHTKKAKGPKCAECGISLPGIKHVRPIKYKNMKKREKTVTRAYGGSECGKCVKDRIVRAFLIEEQKIVKKMVAEKLKKKK 115          
BLAST of mRNA_H-paniculata_contig2933.7997.1 vs. uniprot
Match: A0A485KJ51_9STRA (Aste57867_7967 protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KJ51_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.340e-48
Identity = 80/111 (72.07%), Postives = 94/111 (84.68%), Query Frame = 0
Query:    7 RVTYSRRHAYHTKSNKMKVVKTPGGKLVAHFHKKSAKGARCGDCGITLPGIKHLRPKQYKNLKKREKTVSRSYGGSRCAGCVRQRVVRAFLIEEQKIVKQVLLEKQKKKKS 117
            R+TY RRH+Y TKSN++  VKTPGGKLVAH+ KK++ G +CGDC  +L GIKHL  K YKN+ K EKTVSR+YGGSRCAGCVRQR+VRAFLIEEQKIVK+VLLEK  KKK+
Sbjct:    6 RITYRRRHSYATKSNRIVPVKTPGGKLVAHYRKKTSHGPKCGDCKQSLKGIKHLATKAYKNIAKSEKTVSRAYGGSRCAGCVRQRIVRAFLIEEQKIVKKVLLEKLSKKKT 116          
BLAST of mRNA_H-paniculata_contig2933.7997.1 vs. uniprot
Match: A0A7S2TCS5_PROMC (Hypothetical protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TCS5_PROMC)

HSP 1 Score: 159 bits (402), Expect = 2.380e-48
Identity = 76/110 (69.09%), Postives = 93/110 (84.55%), Query Frame = 0
Query:    7 RVTYSRRHAYHTKSNKMKVVKTPGGKLVAHFHKKSAKGARCGDCGITLPGIKHLRPKQYKNLKKREKTVSRSYGGSRCAGCVRQRVVRAFLIEEQKIVKQVLLEKQKKKK 116
            R+TY RRH+Y TKSNK++ VKTPGG+L A + KK A G +CGDC + LPGI  LRPKQYKNL KREK+VSR+YGG+RCAGCVR+R+VRAFLIEEQK+VK++L +K KK K
Sbjct:    6 RITYKRRHSYATKSNKIRAVKTPGGRLTAQYIKKKAAGPKCGDCAVRLPGIPALRPKQYKNLHKREKSVSRAYGGNRCAGCVRERIVRAFLIEEQKVVKRLLAQKAKKSK 115          
BLAST of mRNA_H-paniculata_contig2933.7997.1 vs. uniprot
Match: F0YE62_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE62_AURAN)

HSP 1 Score: 159 bits (402), Expect = 2.380e-48
Identity = 78/110 (70.91%), Postives = 91/110 (82.73%), Query Frame = 0
Query:    5 DGRVTYSRRHAYHTKSNKMKVVKTPGGKLVAHFHKKSAKGARCGDCGITLPGIKHLRPKQYKNLKKREKTVSRSYGGSRCAGCVRQRVVRAFLIEEQKIVKQVLLEKQKK 114
            D RVT+ RRHAY+TKSN +K VKTPGG+LV H+  K  +G +CGDC  +LPGIKHL    YKN  KRE+TVSR+YGGSRCAGCVRQRVVRAFLIEEQKIVKQ+++EK KK
Sbjct:    3 DTRVTFKRRHAYNTKSNVLKAVKTPGGRLVGHYASKKRQGPKCGDCKCSLPGIKHLSSFSYKNTHKRERTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKQMMMEKSKK 112          
BLAST of mRNA_H-paniculata_contig2933.7997.1 vs. uniprot
Match: A0A7S3K4R2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4R2_9STRA)

HSP 1 Score: 159 bits (402), Expect = 2.450e-48
Identity = 78/107 (72.90%), Postives = 90/107 (84.11%), Query Frame = 0
Query:    5 DGRVTYSRRHAYHTKSNKMKVVKTPGGKLVAHFHKKSAKGARCGDCGITLPGIKHLRPKQYKNLKKREKTVSRSYGGSRCAGCVRQRVVRAFLIEEQKIVKQVLLEK 111
            DGRVTYSRRH+Y TKSN +KV+KTPGGKLV H+  K   G +CGDC   LPGIK L P QYKN+ KRE+TVSR+YGGSRCA CVRQR++RAFLIEEQKIVKQ++LEK
Sbjct:    4 DGRVTYSRRHSYATKSNVLKVIKTPGGKLVGHYANKKRNGPKCGDCKNPLPGIKCLSPFQYKNVHKRERTVSRAYGGSRCAKCVRQRIIRAFLIEEQKIVKQMMLEK 110          
BLAST of mRNA_H-paniculata_contig2933.7997.1 vs. uniprot
Match: K3WQZ0_GLOUD (Uncharacterized protein n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WQZ0_GLOUD)

HSP 1 Score: 155 bits (393), Expect = 5.580e-47
Identity = 78/109 (71.56%), Postives = 90/109 (82.57%), Query Frame = 0
Query:    7 RVTYSRRHAYHTKSNKMKVVKTPGGKLVAHFHKKSAKGARCGDCGITLPGIKHLRPKQYKNLKKREKTVSRSYGGSRCAGCVRQRVVRAFLIEEQKIVKQVLLEKQKKK 115
            RVTY RRH+Y TKSN +K VKTPGG LVA + KK   G +CGDC  +L GIKHL PK+YKN+ K ++TVSR+YGGSRCA CVRQR+VRAFLIEEQKIVK+VLLEK KKK
Sbjct:    6 RVTYRRRHSYATKSNGIKAVKTPGGVLVAQYRKKRCAGPKCGDCKQSLKGIKHLSPKEYKNVSKTQRTVSRAYGGSRCANCVRQRIVRAFLIEEQKIVKKVLLEKMKKK 114          
BLAST of mRNA_H-paniculata_contig2933.7997.1 vs. uniprot
Match: K8YVG6_NANGC (Large subunit ribosomal protein L34e n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVG6_NANGC)

HSP 1 Score: 155 bits (392), Expect = 7.450e-47
Identity = 78/111 (70.27%), Postives = 89/111 (80.18%), Query Frame = 0
Query:    5 DGRVTYSRRHAYHTKSNKMKVVKTPGGKLVAHFHKKSAKGARCGDCGITLPGIKHLRPKQYKNLKKREKTVSRSYGGSRCAGCVRQRVVRAFLIEEQKIVKQVLLEKQKKK 115
            D RVTY RRHAY T+SN   +VKTPGG+L  H  KK  +G  CGDC I LPGIKHL+ K+YKNL KRE+TVSR+YGGSRCA CVR R+VRAFLIEEQKIVK+VL EK+ KK
Sbjct:    4 DTRVTYQRRHAYATRSNGRVIVKTPGGRLTLHQIKKKTRGPHCGDCKIALPGIKHLKTKEYKNLHKRERTVSRAYGGSRCASCVRSRIVRAFLIEEQKIVKRVLNEKKSKK 114          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2933.7997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCD1_ECTSI1.810e-6181.51Ribosomal protein L34 n=1 Tax=Ectocarpus siliculos... [more]
A0A6V2RVW8_HETAK7.110e-5575.22Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A835ZPJ0_9STRA3.690e-5276.79Ribosomal protein L34e-domain-containing protein n... [more]
A0A7S2UXI2_9STRA9.240e-5170.54Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A485KJ51_9STRA1.340e-4872.07Aste57867_7967 protein n=8 Tax=Saprolegniaceae Tax... [more]
A0A7S2TCS5_PROMC2.380e-4869.09Hypothetical protein n=1 Tax=Prorocentrum micans T... [more]
F0YE62_AURAN2.380e-4870.91Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3K4R2_9STRA2.450e-4872.90Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
K3WQZ0_GLOUD5.580e-4771.56Uncharacterized protein n=4 Tax=Pythiaceae TaxID=4... [more]
K8YVG6_NANGC7.450e-4770.27Large subunit ribosomal protein L34e n=3 Tax=Monod... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePRINTSPR01250RIBOSOMALL34coord: 29..46
score: 40.08
coord: 47..57
score: 49.35
coord: 67..89
score: 42.55
coord: 16..29
score: 55.61
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 7..97
e-value: 4.7E-40
score: 135.8
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 7..116
IPR038562Ribosomal protein L34Ae superfamilyGENE3D3.40.1800.40coord: 42..117
e-value: 3.0E-34
score: 118.7
NoneNo IPR availablePANTHERPTHR10759:SF0FI02850P-RELATEDcoord: 7..116
IPR018065Ribosomal protein L34e, conserved sitePROSITEPS01145RIBOSOMAL_L34Ecoord: 18..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2933contigH-paniculata_contig2933:1610..2908 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2933.7997.1mRNA_H-paniculata_contig2933.7997.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2933 1610..2908 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2933.7997.1 ID=prot_H-paniculata_contig2933.7997.1|Name=mRNA_H-paniculata_contig2933.7997.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp
MVRGDGRVTYSRRHAYHTKSNKMKVVKTPGGKLVAHFHKKSAKGARCGDC
GITLPGIKHLRPKQYKNLKKREKTVSRSYGGSRCAGCVRQRVVRAFLIEE
QKIVKQVLLEKQKKKKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008195Ribosomal_L34Ae
IPR038562Ribosomal_L34Ae_sf
IPR018065Ribosomal_L34e_CS