prot_H-paniculata_contig290.7905.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig290.7905.1
Unique Nameprot_H-paniculata_contig290.7905.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length343
Homology
BLAST of mRNA_H-paniculata_contig290.7905.1 vs. uniprot
Match: D7G7U9_ECTSI (E3 ubiquitin protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U9_ECTSI)

HSP 1 Score: 400 bits (1028), Expect = 1.920e-129
Identity = 228/350 (65.14%), Postives = 280/350 (80.00%), Query Frame = 0
Query:    3 RDETARLLQQTEQQVSILKASLERAAKAKEHAEAQAAKDRARLERQGSSSATGT---REDESLKTRLADVNRQLAGSKAIQDALQSELNTTLAAYEKSKAGNQNLIQEISHLSKNNKELMGELTAARAQIKNRQQVRATMELQVKTAAQMRDQGHALKQKALELVAEAERKLQQERAQILDLTQKLHTEKTYADRARQEVDELTQGKQAIEIAHSELREHCNDLNTKYALKEEELDLAKEQTATLTRKVDKVRSHNARLIA-LAEGANNKDAI------DEEIREEELMELRKMIKCSVCQDRKKNRVITKCYHMFCDECVTQNLKTRNRKCPACAKPFGQDDVHELWLT 342
            ++E  RLL+QTEQQVSILKASL+RA KAKEHAEAQAAKDRARLERQG+         REDE+L+ +LAD  RQL GSKAI+DALQSELNTTLAAY +SK GNQ L+QE++ +S + KEL  E+T+ +AQ+KNR +VRATMELQ+KTA QMRDQGHALKQKAL+LVAEAE K+Q ER Q L+L +++HTEK +ADRARQEVD LTQ KQA+E AHS L+ HC  LN+K    EEE++  KEQ ATLTR+++K RS NA+L+  + E A N +++      D E+R+ EL ELRKMIKCSVCQD+KKNRVITKC+HMFCD C+ +++K+RNRKCPAC K +  DDVHELWLT
Sbjct:  541 KEEAERLLKQTEQQVSILKASLDRATKAKEHAEAQAAKDRARLERQGAXXXXXXXXXREDENLRAKLADSLRQLEGSKAIEDALQSELNTTLAAYAQSKEGNQKLVQEMTRISASRKELSDEVTSTKAQLKNRAKVRATMELQIKTAMQMRDQGHALKQKALDLVAEAEEKVQHERKQNLELAREVHTEKAHADRARQEVDFLTQTKQAVETAHSALKVHCEQLNSKVGKVEEEVNSTKEQVATLTRRLEKSRSLNAKLVEQVKETAKNTNSLSKVEEEDNEMRDAELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACGKVYAPDDVHELWLT 890          
BLAST of mRNA_H-paniculata_contig290.7905.1 vs. uniprot
Match: A0A7S2Y421_9STRA (E3 ubiquitin protein ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y421_9STRA)

HSP 1 Score: 121 bits (303), Expect = 4.070e-28
Identity = 95/297 (31.99%), Postives = 148/297 (49.83%), Query Frame = 0
Query:   69 VNRQLAGSKAIQDALQSELNTTLAAYEKSKAGNQNLIQEISHLSKNNKELMG-ELTAARAQIKNRQQVRATMELQVKTAAQMRDQGHALKQKALELVAEAERKLQQERAQILDLTQKLHTEKTYADRARQEVDELTQGKQAIEIAHSELREHCNDLNTKYALKEEELDLAKEQTATLTRKVDKVRSHNARLIALAEG------------ANN----------KDAIDEEIREEELMELRKMIKCSVCQDRKKNRVITKCYHMFCDECVTQNLKTRNRKCPACAKPFGQDDVHELWLT 342
            V  +L  +K++ + L  E+ +  A +E+     Q L+++I      N +LM   +   + Q + R++VRA +E +V  + Q++     L Q+     A  E +L Q       L Q++   K  A   R    EL +    +E +    +  C++L  K   +      AKE      R++ + +  + +L A A+             A N          K A D  + EEE+ EL+ M++CSVCQDR+KN V+TKC+HMFC ECV +NLK R+RKCPAC + FGQDDV  +WLT
Sbjct:   30 VEAELEEAKSLNEGLILEVESLSATFEELTTQGQRLLKQIGEKEDANAKLMSTHIKLNQQQQQQREEVRA-LEARVSQSLQLQRLQDDLVQRTNAREAAIETRLHQLEDAQDSLHQQVSEAKAEAAAERVRAAELGEKLDKVEASLVAAQTRCSELAKKAEDESAAAARAKEDQQAALRRLGRAQKTHVKLEAAAQAXXXXXXXXXXXXAKNEQLQSADLTTKSAADVYLLEEEVKELKTMLRCSVCQDRRKNTVLTKCFHMFCRECVQENLKIRSRKCPACGRMFGQDDVRTIWLT 325          
BLAST of mRNA_H-paniculata_contig290.7905.1 vs. uniprot
Match: A0A662Y869_9STRA (E3 ubiquitin protein ligase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y869_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.690e-21
Identity = 44/64 (68.75%), Postives = 54/64 (84.38%), Query Frame = 0
Query:  279 ELMELRKMIKCSVCQDRKKNRVITKCYHMFCDECVTQNLKTRNRKCPACAKPFGQDDVHELWLT 342
            EL +L+K++KCSVCQDR+K+ +ITKC+HMFC ECV  NLK+RNRKCP C K FGQDDV  +WLT
Sbjct:  805 ELRDLQKLVKCSVCQDRRKDVIITKCFHMFCKECVDNNLKSRNRKCPTCKKMFGQDDVKAVWLT 868          
BLAST of mRNA_H-paniculata_contig290.7905.1 vs. uniprot
Match: A0A2K1KG49_PHYPA (E3 ubiquitin protein ligase n=6 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KG49_PHYPA)

HSP 1 Score: 105 bits (261), Expect = 4.200e-21
Identity = 90/282 (31.91%), Postives = 142/282 (50.35%), Query Frame = 0
Query:   68 DVNRQLAGSKAIQDALQSELNTTLAAYEKSKAGNQNLIQEISHLSKNNKELMGELTAARAQIK-----NRQQVRATMELQVKTAAQMRDQGHALKQKALELVAEAERKLQQERAQILDLTQKLHTEKTYADRARQEVDELTQGKQAIEIAHSELREHC-NDLNTKYALKEEELDL--AKEQTATLTRKVDKVRSHNARLIALAEGANNKDAIDEEIREEELMELRKMIKCSVCQDRKKNRVITKCYHMFCDECVTQNLKTRNRKCPACAKPFGQDDVHELWL 341
            D+   L   K   D   SE+   L AYE  +  NQ L+QEI    + N +LM E   AR Q++      +Q + A M+     A   + +   L+++A   +A  E+   + R Q    +  + + K  A  A +++  +   K A++ AH  L E   N LN    L++E  +   A+E+   L  K+ ++++ +       +     D + EEIR  E +     +KCSVCQDR K  VITKCYH+FC  C+ +NL+ R+RKCP C  PFGQ+DV  +++
Sbjct:  633 DLKESLQAKKEEGDPYISEIEAILHAYEDVQTQNQRLLQEIKERDEYNSQLMSESLKAR-QLQFPLQAEKQVLDADMQHANSDADLHKQRITYLEEQASTFIAHLEKATDENRQQ----SSAMESAKRKAVEAEKQLSSV---KLALDAAHKLLEERGQNFLNVNLQLEKERFNKRRAREELEVLNMKITRLQTPH-------DSGPTVDRLREEIRNYEAI-----LKCSVCQDRSKEVVITKCYHLFCSPCIQRNLELRHRKCPGCGIPFGQNDVRVVYI 894          
BLAST of mRNA_H-paniculata_contig290.7905.1 vs. uniprot
Match: A0A3L6V080_9STRA (E3 ubiquitin protein ligase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V080_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 8.200e-21
Identity = 51/94 (54.26%), Postives = 60/94 (63.83%), Query Frame = 0
Query:  249 DKVRSHNARLIALAEGANNKDAIDEEIREEELMELRKMIKCSVCQDRKKNRVITKCYHMFCDECVTQNLKTRNRKCPACAKPFGQDDVHELWLT 342
            DK+R   A L      ANN D    E+   EL+ELRK +KCSVCQD  K  +I+KC HMFC EC+  NLK RNRKCP C K FGQDDV  ++ T
Sbjct:  145 DKLREARASL------ANNGDGEVSELERYELVELRKKVKCSVCQDAPKEVMISKCSHMFCKECMESNLKARNRKCPTCKKMFGQDDVKGVYWT 232          
BLAST of mRNA_H-paniculata_contig290.7905.1 vs. uniprot
Match: A0A397CF91_9STRA (E3 ubiquitin protein ligase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CF91_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.580e-20
Identity = 51/94 (54.26%), Postives = 60/94 (63.83%), Query Frame = 0
Query:  249 DKVRSHNARLIALAEGANNKDAIDEEIREEELMELRKMIKCSVCQDRKKNRVITKCYHMFCDECVTQNLKTRNRKCPACAKPFGQDDVHELWLT 342
            DK+R   A L      ANN D    E+   EL+ELRK +KCSVCQD  K  +I+KC HMFC EC+  NLK RNRKCP C K FGQDDV  ++ T
Sbjct:  177 DKLREARASL------ANNGDGEVSELERYELVELRKKVKCSVCQDAPKEVMISKCSHMFCKECMESNLKARNRKCPTCKKMFGQDDVKGVYWT 264          
BLAST of mRNA_H-paniculata_contig290.7905.1 vs. uniprot
Match: A0A225WEA7_9STRA (E3 ubiquitin protein ligase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WEA7_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.260e-20
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 0
Query:  279 ELMELRKMIKCSVCQDRKKNRVITKCYHMFCDECVTQNLKTRNRKCPACAKPFGQDDVHELWLT 342
            EL +L+K++ CSVCQDR+K+ +I+KC+HMF  EC+  NLK RNRKCP C K FGQDD+  +W T
Sbjct:  101 ELRDLQKLVNCSVCQDRRKDVIISKCFHMFYKECIDNNLKARNRKCPTCKKMFGQDDIKSVWFT 164          
BLAST of mRNA_H-paniculata_contig290.7905.1 vs. uniprot
Match: A0A8K1CU16_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU16_PYTOL)

HSP 1 Score: 102 bits (253), Expect = 4.440e-20
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0
Query:  279 ELMELRKMIKCSVCQDRKKNRVITKCYHMFCDECVTQNLKTRNRKCPACAKPFGQDDVHELWLT 342
            EL++L+K +KCSVCQDR K+ +I+KC+HMFC ECV  NLK+RNRKCP C K FGQDDV  +W T
Sbjct:  767 ELVDLQKQLKCSVCQDRHKDVIISKCFHMFCKECVDNNLKSRNRKCPTCKKMFGQDDVKNVWFT 830          
BLAST of mRNA_H-paniculata_contig290.7905.1 vs. uniprot
Match: A0A024GA58_9STRA (E3 ubiquitin protein ligase n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GA58_9STRA)

HSP 1 Score: 102 bits (253), Expect = 4.510e-20
Identity = 41/64 (64.06%), Postives = 52/64 (81.25%), Query Frame = 0
Query:  279 ELMELRKMIKCSVCQDRKKNRVITKCYHMFCDECVTQNLKTRNRKCPACAKPFGQDDVHELWLT 342
            EL +L+K++ CSVCQDR+K+ +I+KCYHMFC EC+  NLK RNRKCP+C K FGQDDV  +W T
Sbjct:  799 ELKDLQKIVNCSVCQDRQKSVIISKCYHMFCKECIDSNLKARNRKCPSCKKMFGQDDVKSVWFT 862          
BLAST of mRNA_H-paniculata_contig290.7905.1 vs. uniprot
Match: A0A2P4YBG3_9STRA (E3 ubiquitin protein ligase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YBG3_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 6.040e-20
Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 0
Query:  279 ELMELRKMIKCSVCQDRKKNRVITKCYHMFCDECVTQNLKTRNRKCPACAKPFGQDDVHELWLT 342
            EL +L+K++ CSVCQDR+K+ +I+KC+HMFC EC+  NLK+RNRKCP C K FG DDV  +W T
Sbjct:  261 ELRDLQKLVNCSVCQDRRKDVIISKCFHMFCKECIDNNLKSRNRKCPTCKKMFGHDDVKTVWFT 324          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig290.7905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7U9_ECTSI1.920e-12965.14E3 ubiquitin protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A7S2Y421_9STRA4.070e-2831.99E3 ubiquitin protein ligase n=1 Tax=Fibrocapsa jap... [more]
A0A662Y869_9STRA1.690e-2168.75E3 ubiquitin protein ligase n=2 Tax=Nothophytophth... [more]
A0A2K1KG49_PHYPA4.200e-2131.91E3 ubiquitin protein ligase n=6 Tax=Physcomitrium ... [more]
A0A3L6V080_9STRA8.200e-2154.26E3 ubiquitin protein ligase n=1 Tax=Aphanomyces as... [more]
A0A397CF91_9STRA1.580e-2054.26E3 ubiquitin protein ligase n=2 Tax=Aphanomyces as... [more]
A0A225WEA7_9STRA2.260e-2059.38E3 ubiquitin protein ligase n=1 Tax=Phytophthora m... [more]
A0A8K1CU16_PYTOL4.440e-2065.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GA58_9STRA4.510e-2064.06E3 ubiquitin protein ligase n=2 Tax=Albugo candida... [more]
A0A2P4YBG3_9STRA6.040e-2060.94E3 ubiquitin protein ligase (Fragment) n=1 Tax=Phy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..184
NoneNo IPR availableCOILSCoilCoilcoord: 101..128
NoneNo IPR availableCOILSCoilCoilcoord: 192..247
NoneNo IPR availableCOILSCoilCoilcoord: 10..44
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 288..331
e-value: 2.7E-9
score: 36.7
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 277..335
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 289..327
e-value: 1.9E-6
score: 37.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 289..327
score: 11.575
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 269..342
e-value: 1.6E-18
score: 67.8
IPR013956E3 ubiquitin ligase Bre1PANTHERPTHR23163RING FINGER PROTEIN-RELATEDcoord: 19..342
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 304..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig290contigH-paniculata_contig290:33895..42255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig290.7905.1mRNA_H-paniculata_contig290.7905.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig290 33895..42255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig290.7905.1 ID=prot_H-paniculata_contig290.7905.1|Name=mRNA_H-paniculata_contig290.7905.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=343bp
LQRDETARLLQQTEQQVSILKASLERAAKAKEHAEAQAAKDRARLERQGS
SSATGTREDESLKTRLADVNRQLAGSKAIQDALQSELNTTLAAYEKSKAG
NQNLIQEISHLSKNNKELMGELTAARAQIKNRQQVRATMELQVKTAAQMR
DQGHALKQKALELVAEAERKLQQERAQILDLTQKLHTEKTYADRARQEVD
ELTQGKQAIEIAHSELREHCNDLNTKYALKEEELDLAKEQTATLTRKVDK
VRSHNARLIALAEGANNKDAIDEEIREEELMELRKMIKCSVCQDRKKNRV
ITKCYHMFCDECVTQNLKTRNRKCPACAKPFGQDDVHELWLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR013956E3_ubiquit_lig_Bre1
IPR017907Znf_RING_CS