prot_H-paniculata_contig28863.7869.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28863.7869.1
Unique Nameprot_H-paniculata_contig28863.7869.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length132
Homology
BLAST of mRNA_H-paniculata_contig28863.7869.1 vs. uniprot
Match: C0SQ79_NEOYE (Polyprotein n=2 Tax=Neopyropia yezoensis TaxID=2788 RepID=C0SQ79_NEOYE)

HSP 1 Score: 120 bits (300), Expect = 6.730e-29
Identity = 63/129 (48.84%), Postives = 85/129 (65.89%), Query Frame = 0
Query:    1 MYASTGPTPDIAYAVHQAARRMEDPCREDFRTYKRIFRYLSTVPDLGITFGDKSNCTGLEGLVDADWVEDVEDRKSTTRYIFKLNGGAISWCSREQQLVTWSSTEAQYVAAGEAGKKTVYLRDLRGSIG 129
            MY S    PD+AYAV + ARRM  P   D+R  K + RYL    ++GIT+G ++N   LEG VD+D+  D + RKSTT ++  L+GGAISW SR Q+LV  S+  A+YVAA EA K +++LR L G +G
Sbjct: 1188 MYLSNQTRPDLAYAVGKLARRMSAPTEGDWRLAKGVLRYLQGTRNMGITYGKEAN---LEGWVDSDFAGDTQSRKSTTGFVVTLHGGAISWRSRMQRLVATSTAIAEYVAAAEAVKDSLWLRRLAGDLG 1313          
BLAST of mRNA_H-paniculata_contig28863.7869.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 111 bits (278), Expect = 3.200e-27
Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = 0
Query:    2 YASTGPTPDIAYAVHQAARRMEDPCREDFRTYKRIFRYLSTVPDLGITFGDKSNCTGLEGLVDADWVEDVEDRKSTTRYIFKLNGGAISWCSREQQLVTWSSTEAQYVAAGEAGKKTVYLRDLRGSIG 129
            Y +T   PD+A AV   ++ M  P +E +   KR+ RY+    + G+ F  KS    L G  DADW  D++ R+ST+ Y+F++NG  +SWCS+ Q  VT S+TEA+YVA   A ++ V+LR L   IG
Sbjct:   95 YVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIG 222          
BLAST of mRNA_H-paniculata_contig28863.7869.1 vs. uniprot
Match: R7QDG7_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QDG7_CHOCR)

HSP 1 Score: 110 bits (275), Expect = 3.270e-27
Identity = 53/124 (42.74%), Postives = 75/124 (60.48%), Query Frame = 0
Query:    1 MYASTGPTPDIAYAVHQAARRMEDPCREDFRTYKRIFRYLSTVPDLGITFGDKSNCTGLEGLVDADWVEDVEDRKSTTRYIFKLNGGAISWCSREQQLVTWSSTEAQYVAAGEAGKKTVYLRDL 124
            MY   G  PD+AYA+ + ++   +PC   +   KR+ RY+    +LGI F +KS    L G  DADW    + RKST+ Y+FK  GGAISW SR+Q +V  S+ EA+Y+A  EA K+  +LR +
Sbjct:   39 MYLMVGTRPDLAYAIGKLSQHSANPCESHWAGVKRVMRYVQGTRNLGIVFDNKSKSPELFGFSDADWAGCSDSRKSTSGYVFKFCGGAISWSSRKQTVVATSTCEAEYIALCEACKEATWLRQV 162          
BLAST of mRNA_H-paniculata_contig28863.7869.1 vs. uniprot
Match: A0A182G509_AEDAL (Uncharacterized protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G509_AEDAL)

HSP 1 Score: 109 bits (272), Expect = 6.570e-27
Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 0
Query:    1 MYASTGPTPDIAYAVHQAARRMEDPCREDFRTYKRIFRYLSTVPDLGITFGDKSNCTGLEGLVDADWVEDVEDRKSTTRYIFKLNGGAISWCSREQQLVTWSSTEAQYVAAGEAGKKTVYL 121
            M+  +G  PDI +A+   AR  E+P +E ++  KR+ RYLS   D+G+ F  + +   L   VDADW  D+ DRKSTT +  K+ G  + WCSR+Q +V  SS EA+YVA  +A K+ ++L
Sbjct:   21 MFLMSGTRPDICFALTYLARFQENPTQEHWQCLKRVLRYLSGTIDVGLQFSKRDDEPALSCYVDADWANDLVDRKSTTGFFIKVYGNVVQWCSRKQAIVALSSCEAEYVAVCDAAKEVLWL 141          
BLAST of mRNA_H-paniculata_contig28863.7869.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI)

HSP 1 Score: 110 bits (274), Expect = 7.880e-27
Identity = 61/129 (47.29%), Postives = 77/129 (59.69%), Query Frame = 0
Query:    1 MYASTGPTPDIAYAVHQAARRMEDPCREDFRTYKRIFRYLSTVPDLGITFGD--KSNCT-GLE--GLVDADWVEDVEDRKSTTRYIFKLNGGAISWCSREQQLVTWSSTEAQYVAAGEAGKKTVYLRDL 124
            MYA  G  PDIA+AV   ++    P  E +    R+FRYL     L +T+G   K  C  GL   G  DADW  D  DR+ST+ Y+FKL GGAISWCSR+QQ +  SSTEA+YVA   A K+ ++L  L
Sbjct:   62 MYAMLGSRPDIAFAVGTLSKHASTPGTEHWNALMRVFRYLRGTSGLRLTYGKDLKPLCEHGLTVVGYSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTL 190          
BLAST of mRNA_H-paniculata_contig28863.7869.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE)

HSP 1 Score: 110 bits (274), Expect = 8.360e-27
Identity = 53/129 (41.09%), Postives = 78/129 (60.47%), Query Frame = 0
Query:    1 MYASTGPTPDIAYAVHQAARRMEDPCREDFRTYKRIFRYLSTVPDLGITFGDKSNCTGLEGLVDADWVEDVEDRKSTTRYIFKLNGGAISWCSREQQLVTWSSTEAQYVAAGEAGKKTVYLRDLRGSIG 129
            MY      PD+A AV   ++   DPC   ++  KR+ RYL   P+ G+ F  +   + + G  DADW  D+E R+ST+ Y+F +NGG ISW S++Q+ V  SSTEA+Y+A  EA K+ V+L+   G +G
Sbjct:   45 MYLMVATRPDLAAAVGSLSQFSSDPCPTHWQALKRVLRYLQATPNHGLEF-TREEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELG 172          
BLAST of mRNA_H-paniculata_contig28863.7869.1 vs. uniprot
Match: A0A2N9GS71_FAGSY (Uncharacterized protein n=3 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GS71_FAGSY)

HSP 1 Score: 109 bits (273), Expect = 1.110e-26
Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = 0
Query:    1 MYASTGPTPDIAYAVHQAARRMEDPCREDFRTYKRIFRYLSTVPDLGITFGDKSNCTGLEGLVDADWVEDVEDRKSTTRYIFKLNGGAISWCSREQQLVTWSSTEAQYVAAGEAGKKTVYLRDLRGSIGF 130
            MYA     PD+A+AV   +R M +P RE +   K IFRYL    + GI F  +     + G VDAD+  +V+DR+STT Y+F L+GG I W S  Q +V  S+TEA+Y+A  EA K+ ++L+ L   +G 
Sbjct:   73 MYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGL 202          
BLAST of mRNA_H-paniculata_contig28863.7869.1 vs. uniprot
Match: UPI001CF2BB47 (secreted RxLR effector protein 161-like n=1 Tax=Bufo gargarizans TaxID=30331 RepID=UPI001CF2BB47)

HSP 1 Score: 105 bits (261), Expect = 2.560e-26
Identity = 54/124 (43.55%), Postives = 73/124 (58.87%), Query Frame = 0
Query:    1 MYASTGPTPDIAYAVHQAARRMEDPCREDFRTYKRIFRYLSTVPDLGITFGDKSNCTGLEGLVDADWVEDVEDRKSTTRYIFKLNGGAISWCSREQQLVTWSSTEAQYVAAGEAGKKTVYLRDL 124
            +Y +T   PDIA AV    R++  P + D+   KRI  YL    D  +        +GL G VDADW  D  DRKST+ ++F    G ISW +R+Q  VT SSTEA+YVAA +AG++ ++LR L
Sbjct:    5 LYIATVARPDIATAVGFLCRKVSQPTQMDWNAAKRIIHYLKGTIDFKLKLSSTGK-SGLTGYVDADWAGDPSDRKSTSGHLFLFKDGLISWTTRKQSTVTLSSTEAEYVAASQAGQEVIWLRQL 127          
BLAST of mRNA_H-paniculata_contig28863.7869.1 vs. uniprot
Match: UPI0018A876E3 (secreted RxLR effector protein 161-like n=2 Tax=Lucilia sericata TaxID=13632 RepID=UPI0018A876E3)

HSP 1 Score: 108 bits (269), Expect = 2.710e-26
Identity = 53/129 (41.09%), Postives = 79/129 (61.24%), Query Frame = 0
Query:    1 MYASTGPTPDIAYAVHQAARRMEDPCREDFRTYKRIFRYLSTVPDLGITFGDKSNCTGLEGLVDADWVEDVEDRKSTTRYIFKLNGGAISWCSREQQLVTWSSTEAQYVAAGEAGKKTVYLRDLRGSIG 129
            MYA+    PD+++AV   AR   +P +  ++  KRI RYL    +  + F    N   +EG+ DADW  D++DRKST+ Y+FK  GG ISW S++QQ    S+TEA+Y+A   AG++ ++LR L   +G
Sbjct:   45 MYAAQVSRPDVSFAVGALARYNNNPGKAHWQAVKRIMRYLKGTINYKLQFSKDENAH-IEGISDADWAGDLDDRKSTSGYVFKFQGGCISWNSKKQQTTALSTTEAEYMALAAAGQEALWLRSLFNELG 172          
BLAST of mRNA_H-paniculata_contig28863.7869.1 vs. uniprot
Match: UPI001CB79443 (Ty1/Copia family ribonuclease HI n=1 Tax=Blastococcus sp. CPCC 205250 TaxID=2732513 RepID=UPI001CB79443)

HSP 1 Score: 105 bits (263), Expect = 3.810e-26
Identity = 55/132 (41.67%), Postives = 79/132 (59.85%), Query Frame = 0
Query:    1 MYASTGPTPDIAYAVHQAARRMEDPCREDFRTYKRIFRYLSTVPDLGITFGDKSN--CTGLEGLVDADWVEDVEDRKSTTRYIFKLNGGAISWCSREQQLVTWSSTEAQYVAAGEAGKKTVYLRDLRGSIGF 130
            MYA     PDIA AV   +R M +P +E +   KR+FRYL       + F  K +    G+ G VDA+W  D+++R+ST+ Y+F L GG +SW S+ Q +V  SSTEA+Y+A   A K+ ++LR L   +GF
Sbjct:   29 MYAMVCTRPDIAQAVGVLSRYMSNPGKEHWIAVKRVFRYLRGTSKYALCFEGKGDGKTLGIMGSVDANWGGDLDNRRSTSGYVFNLLGGPVSWMSKRQSVVALSSTEAEYMALTHASKEAMWLRRLCSELGF 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28863.7869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
C0SQ79_NEOYE6.730e-2948.84Polyprotein n=2 Tax=Neopyropia yezoensis TaxID=278... [more]
A0A7D9D5L2_PARCT3.200e-2741.41Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
R7QDG7_CHOCR3.270e-2742.74Uncharacterized protein n=3 Tax=Chondrus crispus T... [more]
A0A182G509_AEDAL6.570e-2742.15Uncharacterized protein n=2 Tax=Aedes albopictus T... [more]
A0A060SU91_PYCCI7.880e-2747.29Uncharacterized protein n=2 Tax=Pycnoporus cinnaba... [more]
A0A090C2V0_HYAAE8.360e-2741.09RxLR effector candidate protein (Fragment) n=3 Tax... [more]
A0A2N9GS71_FAGSY1.110e-2642.31Uncharacterized protein n=3 Tax=Fagus sylvatica Ta... [more]
UPI001CF2BB472.560e-2643.55secreted RxLR effector protein 161-like n=1 Tax=Bu... [more]
UPI0018A876E32.710e-2641.09secreted RxLR effector protein 161-like n=2 Tax=Lu... [more]
UPI001CB794433.810e-2641.67Ty1/Copia family ribonuclease HI n=1 Tax=Blastococ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..130
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 9..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28863contigH-paniculata_contig28863:1624..2019 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28863.7869.1mRNA_H-paniculata_contig28863.7869.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28863 1615..2226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28863.7869.1 ID=prot_H-paniculata_contig28863.7869.1|Name=mRNA_H-paniculata_contig28863.7869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp
MYASTGPTPDIAYAVHQAARRMEDPCREDFRTYKRIFRYLSTVPDLGITF
GDKSNCTGLEGLVDADWVEDVEDRKSTTRYIFKLNGGAISWCSREQQLVT
WSSTEAQYVAAGEAGKKTVYLRDLRGSIGFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like