prot_H-paniculata_contig2884.7862.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2884.7862.1
Unique Nameprot_H-paniculata_contig2884.7862.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length113
Homology
BLAST of mRNA_H-paniculata_contig2884.7862.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.520e-16
Identity = 50/110 (45.45%), Postives = 67/110 (60.91%), Query Frame = 0
Query:    4 GRTSQNAVNHLRYNADMVMLAHNDPGDGAAFTYNKRVLVDDLNGNSSSPVRAALPLMNNIPVESAKTDTPPRCCLFLVNRCSNMGDTVISLGAESNQIMETALDRARKFE 113
            GR    A NHL+ + DMV+L HN+   GA FT NKRV VDD  G  S     ++ LM ++  E A TD   R   FL+NR ++ GDTV SL AE + ++E AL+R+R+ E
Sbjct:  437 GRPPIRAENHLKNHLDMVLLIHNE---GATFTCNKRVTVDDPFGFGSD-ASPSMQLMTDVEYEGAATDIVMRPLHFLINRYTHAGDTVASLSAERHNVVEAALERSRRVE 542          
BLAST of mRNA_H-paniculata_contig2884.7862.1 vs. uniprot
Match: A0A6H5JTW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW8_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 2.010e-16
Identity = 50/120 (41.67%), Postives = 65/120 (54.17%), Query Frame = 0
Query:    3 AGRTSQNAVNHLRYNADMVMLAH-------NDPGDGAAFTYNKRVLVDDLNGNSS--SPVRAALPLMNNIPVESAKTDTPPRCCLFLVNRCSNMGDTVISLGAESNQIMETALDRARKFE 113
            AGR +  A  HL+++ D VML H       N P DG  FT N++V  DDL GNS+  S       ++ +I       D P +  +FLVNR S  GDTV+  GAE N  +ETA+ R RK E
Sbjct:   19 AGRPASAANGHLKFSQDAVMLVHLTSFSSSNSPTDG--FTVNEKVTTDDLYGNSTAASVTSQCSSILTDIQHPGKGVDWPTKALMFLVNRYSRQGDTVLLFGAEHNTGVETAISRGRKVE 136          
BLAST of mRNA_H-paniculata_contig2884.7862.1 vs. uniprot
Match: A0A6H5JEK0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK0_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 4.000e-14
Identity = 51/121 (42.15%), Postives = 66/121 (54.55%), Query Frame = 0
Query:    2 RAGRTSQNAVNHLRYNADMVMLAH-------NDPGDGAAFTYNKRVLVDDLNGNSS--SPVRAALPLMNNIPVESAKTDTPPRCCLFLVNRCSNMGDTVISLGAESNQIMETALDRARKFE 113
            RAGR +  A  HL+++ D VML H       N P DG  FT N++V  DDL GNS+  S       ++ +I       D P +  +FLVNR S  GDTV+  GAE N  +ETA+ R RK E
Sbjct:  520 RAGRPASAANGHLKFSQDAVMLVHLTSFSSSNSPTDG--FTVNEKVTTDDLYGNSTAASVTSQCSSILTDIQHPGKGVDWP-KALMFLVNRYSRQGDTVLLFGAEHNTRVETAITRGRKVE 637          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2884.7862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5LBJ9_9PHAE1.520e-1645.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTW8_9PHAE2.010e-1641.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEK0_9PHAE4.000e-1442.15Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2884contigH-paniculata_contig2884:1155..1847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2884.7862.1mRNA_H-paniculata_contig2884.7862.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2884 1155..1858 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2884.7862.1 ID=prot_H-paniculata_contig2884.7862.1|Name=mRNA_H-paniculata_contig2884.7862.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
MRAGRTSQNAVNHLRYNADMVMLAHNDPGDGAAFTYNKRVLVDDLNGNSS
SPVRAALPLMNNIPVESAKTDTPPRCCLFLVNRCSNMGDTVISLGAESNQ
IMETALDRARKFE
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