prot_H-paniculata_contig2883.7858.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2883.7858.1
Unique Nameprot_H-paniculata_contig2883.7858.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length134
Homology
BLAST of mRNA_H-paniculata_contig2883.7858.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 4.170e-18
Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0
Query:    4 VKVPQERAMDNPMDEIKRKHAVVIVNKINSEHPSTTTDGWTSCANDSYISFTMSYIDDGWEWVALVLSCSKKLGQSTGEDLARSIDRFMNDHDLEGRVVAGTTDCEPLVVKRGR 117
             +VP+++     M  +K+     +   I  E    T+DGWTSCAND+Y+S T + I   W+ V L + CSK  G +TG+ LA  I   +  H L G+V A TTDCEP +VK GR
Sbjct:    9 ARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGR 122          
BLAST of mRNA_H-paniculata_contig2883.7858.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.830e-14
Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 0
Query:   34 EHPSTTTDGWTSCANDSYISFTMSYIDDGWEWVALVLSCSKKLGQSTGEDLARSIDRFMNDHDLEGRVVAGTTDCEPLVVKRGR 117
            EH + T+DGWT  +ND+Y+SFT +YI   ++ VAL L C K   ++ GEDL  ++   +  + L GR VA TTDCE  +VK GR
Sbjct:    4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGR 87          
BLAST of mRNA_H-paniculata_contig2883.7858.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.860e-11
Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 0
Query:   45 SCANDSYISFTMSYIDDGWEWVALVLSCSKKLGQSTGEDLARSIDRFMNDHDLEGRVVAGTTDCEPLVVKRGR 117
            S +ND+Y++FT +YI   ++ VAL L   K  G++TGEDL  ++   +  + L GR VA TTDCEP +VK GR
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGR 75          
BLAST of mRNA_H-paniculata_contig2883.7858.1 vs. uniprot
Match: UPI001C1A98B4 (Hypothetical protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1A98B4)

HSP 1 Score: 56.2 bits (134), Expect = 1.410e-6
Identity = 33/108 (30.56%), Postives = 59/108 (54.63%), Query Frame = 0
Query:    3 RVKVPQERAMDNPMDEIKRKHAVVI---VNKINSEHPSTTTDGWTSCANDSYISFTMSYIDDGWEWVALVLSCSKKLGQSTGEDLARSIDRFMNDHDLEGRVVAGTTD 107
            R K+P  + +   + EI      ++    +K++S+  + TTD WT+C N +Y+S T+ +IDD W+   ++L       + TG  LA ++   +ND  L  +++A TTD
Sbjct:  137 RYKLPSRQTVSIKIQEIYESQCKILKTYFSKLSSK-VTITTDVWTACTNQAYMSVTLHWIDDEWKMYCILLDLVSLYERHTGVTLANTMYTIINDFGLGEKIIAITTD 243          
BLAST of mRNA_H-paniculata_contig2883.7858.1 vs. uniprot
Match: UPI001C162B64 (Hypothetical protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C162B64)

HSP 1 Score: 55.1 bits (131), Expect = 3.600e-6
Identity = 33/108 (30.56%), Postives = 59/108 (54.63%), Query Frame = 0
Query:    3 RVKVPQERAMDNPMDEIKRKHAVVI---VNKINSEHPSTTTDGWTSCANDSYISFTMSYIDDGWEWVALVLSCSKKLGQSTGEDLARSIDRFMNDHDLEGRVVAGTTD 107
            R K+P  + +   + EI      ++    +K++S+  + TTD WT+C N +Y+S T+ +IDD W+   ++L       + TG  LA ++   +ND  L  +++A TTD
Sbjct:  164 RYKLPSRQTVSIKIQEIYESQCKILKTYFSKLSSK-VAITTDVWTACTNQAYMSVTLHWIDDEWKMYCILLDLVPLHERHTGVTLANTMYTIINDFGLGEKIIAITTD 270          
BLAST of mRNA_H-paniculata_contig2883.7858.1 vs. uniprot
Match: UPI001C1A592D (Hypothetical protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1A592D)

HSP 1 Score: 55.1 bits (131), Expect = 3.800e-6
Identity = 33/108 (30.56%), Postives = 59/108 (54.63%), Query Frame = 0
Query:    3 RVKVPQERAMDNPMDEIKRKHAVVI---VNKINSEHPSTTTDGWTSCANDSYISFTMSYIDDGWEWVALVLSCSKKLGQSTGEDLARSIDRFMNDHDLEGRVVAGTTD 107
            R K+P  + +   + EI      ++    +K++S+  + TTD WT+C N +Y+S T+ +IDD W+   ++L       + TG  LA ++   +ND  L  +++A TTD
Sbjct:  163 RYKLPSRQTVSIKIQEIYESQCKILKTYFSKLSSK-VAITTDVWTACTNQAYMSVTLHWIDDEWKMYCILLDLVPLHERHTGVTLANTMYTIINDFGLGEKIIAITTD 269          
BLAST of mRNA_H-paniculata_contig2883.7858.1 vs. uniprot
Match: X1WY43_ACYPI (DUF659 domain-containing protein n=2 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WY43_ACYPI)

HSP 1 Score: 53.5 bits (127), Expect = 1.090e-5
Identity = 30/81 (37.04%), Postives = 45/81 (55.56%), Query Frame = 0
Query:   27 IVNKINSEHPSTTTDGWTSCANDSYISFTMSYIDDGWEWVALVLSCSKKLGQSTGEDLARSIDRFMNDHDLEGRVVAGTTD 107
            I+  IN  + S TTDGWTS A DSY++FT+ Y DD W+  ++ LS  +     T E+L  SI   +   +L  ++   + D
Sbjct:   83 IIENIN--YISLTTDGWTSTAIDSYLTFTVHYFDDNWKLYSVTLSIEEIQESHTAENLKDSIMNVIESWNLNNKITGISHD 161          
BLAST of mRNA_H-paniculata_contig2883.7858.1 vs. uniprot
Match: UPI000DC13D07 (zinc finger BED domain-containing protein 1-like n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=UPI000DC13D07)

HSP 1 Score: 52.8 bits (125), Expect = 2.400e-5
Identity = 39/126 (30.95%), Postives = 60/126 (47.62%), Query Frame = 0
Query:    9 ERAMDNPMDEIKRKHAVVIVNKINSEHPSTTTDGWTSCANDSYISFTMSYIDDGWEWVALVLSCSKKLGQSTGEDLARSIDRFMNDHDLEGRVVAGTTDCEPLVVKRGRRRRVQARRVHKPPAEEH 134
            E+  D+ M E+KR       N  N +  + TTDGWTS A DSYI+FT  Y ++ WE    VL   +     T +++  S+   +   +L G+V+  + D    V    R   +Q R ++  P   H
Sbjct:  128 EKMYDDKMMELKR-------NLENIKGVALTTDGWTSLAVDSYITFTCHYFNENWELCTQVLGFEEMRESHTADNIQDSLINIIETWNLTGKVIGISHDNAANVTNAVRN--LQERDIYSSPCAAH 244          
BLAST of mRNA_H-paniculata_contig2883.7858.1 vs. uniprot
Match: UPI000905C858 (zinc finger BED domain-containing protein 1 n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=UPI000905C858)

HSP 1 Score: 51.2 bits (121), Expect = 8.180e-5
Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 0
Query:   34 EHPSTTTDGWTSCANDSYISFTMSYIDDGWEWVALVLSCSKKLGQSTGEDLARSIDRFMNDHDL-EGRVVAGTTDCEPLVVK 114
            +H + T+D W+SC  + YIS T+ YID+ WE    VL  +      TGE + + +   ++  D+ E  +VA TTD  P +VK
Sbjct:  208 KHVAATSDLWSSCTMEPYISLTVHYIDNKWELRTRVLETAYFPSDHTGEMVGQGLRAMLSAWDISEEDLVAITTDNGPNIVK 289          
BLAST of mRNA_H-paniculata_contig2883.7858.1 vs. uniprot
Match: UPI00096AF313 (zinc finger BED domain-containing protein 1-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096AF313)

HSP 1 Score: 51.2 bits (121), Expect = 8.400e-5
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 0
Query:   19 IKRKHAV---VIVNKINSEHPST--TTDGWTSCANDSYISFTMSYIDDGWEWVALVLSCSKKLGQSTGEDL 84
            I++KH V    ++ ++ +E+  T  T+D WTSCAND+YIS T  +ID  W+ V+ VL  S   G  TG  +
Sbjct:  165 IRQKHEVGKRAMMQRLKNENAFTAFTSDIWTSCANDAYISLTAHFIDSDWQLVSCVLGSSPFPGHHTGSHI 235          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2883.7858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5L7Y8_9PHAE4.170e-1841.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHP9_9PHAE1.830e-1446.43Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE1.860e-1146.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001C1A98B41.410e-630.56Hypothetical protein n=2 Tax=Rhizophagus irregular... [more]
UPI001C162B643.600e-630.56Hypothetical protein n=2 Tax=Rhizophagus irregular... [more]
UPI001C1A592D3.800e-630.56Hypothetical protein n=3 Tax=Rhizophagus irregular... [more]
X1WY43_ACYPI1.090e-537.04DUF659 domain-containing protein n=2 Tax=Acyrthosi... [more]
UPI000DC13D072.400e-530.95zinc finger BED domain-containing protein 1-like n... [more]
UPI000905C8588.180e-536.59zinc finger BED domain-containing protein 1 n=1 Ta... [more]
UPI00096AF3138.400e-540.85zinc finger BED domain-containing protein 1-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 28..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2883contigH-paniculata_contig2883:14235..14636 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2883.7858.1mRNA_H-paniculata_contig2883.7858.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2883 14235..14636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2883.7858.1 ID=prot_H-paniculata_contig2883.7858.1|Name=mRNA_H-paniculata_contig2883.7858.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
RRRVKVPQERAMDNPMDEIKRKHAVVIVNKINSEHPSTTTDGWTSCANDS
YISFTMSYIDDGWEWVALVLSCSKKLGQSTGEDLARSIDRFMNDHDLEGR
VVAGTTDCEPLVVKRGRRRRVQARRVHKPPAEEH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf