prot_H-paniculata_contig2865.7810.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2865.7810.1
Unique Nameprot_H-paniculata_contig2865.7810.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1114
Homology
BLAST of mRNA_H-paniculata_contig2865.7810.1 vs. uniprot
Match: A0A6H5KY04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY04_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 2.440e-68
Identity = 365/1040 (35.10%), Postives = 459/1040 (44.13%), Query Frame = 0
Query:  139 EGEAKLRARLAQSETWNKEILERVAALEEANFDLEASIQMVEIEASHRVAKEAKAMQSELSFRDHQLTIAQSSHTTAVKELNAERSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQAAVAEAATALEKNEKXXXXXXXRSAGSSTAANAKDAARPPFSITLAEIILSELADEVMVLLKATGNGAWGAEAGGVGEDGVLDFGGGSESYXXXXXXXXXXXRDGSWLRSPLEVDMRRRGRSSSFSSSAALDATPPVGARDYGXXXXXXXXXXXXXXCRGTDSAPRQQGRATAGRNGDFRGASPLSLAFTPVRASSGAAVPEAGMRRREWSSEHAARDDSCANRGWRQGGGGSGPPSAGASWCDSNWGAADISPRHFGGVGFEGGRRVDDGMYVEQGERINAI--------------------------RSLSSNMFTCIVDLVEGMACAGDLLDVLAAFLEELPGETDDELEILVGAVRLIHRTLSVLPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGFDADSDAKGNSKKRRRPESEDSCGNHEERSSDNDCHGEHEGGDGDGGDSNALG--VVDGXXXXXXXXXXXXXXGPTTAAGQKPEMHHQ-KXXXXXXDDGVWSSSKLPPSSSCVVFIAGEPMAPRDGLASAPAAPASVWCAATVPRLPPATAVVADRLSDGKSGRGLGLGWSGRRGEGEIGARLKYQLVAVFHQGVFSGCPALVEAALQAVQSVIWDLDGATLASWGGLFDGDSFHEVMLSDLHRSTWELGAQILTILSRNAALFRWLATATPGTEDED----------PPPTLGYPSG-LSSAIVAASXXXXXXXXXXXXXXKSVAATEVTAPPTPPSRVGVIAEGVIGEGA--------------EGGXGGGESLLRRLCLDAVTVGEHASFGEDVGLRLSIVRLAFCLCQRYGADAARPLFGEDGTRAGSG--------------LLPALVTFVRLELEYWERRRYSQ 1110
            +G A LRARLA+++  N E LERV  LEE NFDLEA++QM+E+EASHRV ++AKA+QS+L+F+DHQLT A+  HT+AV+ELN ER+KR  XXXXXXXXXX         XXXXXXXXXXXXX E A+    +    +          R AG     N  D    P +++LAE+ILSE++D+VMVLL A                            XXXXXXXXXXX                                         XXXXXXXXXXXXXX    D  P      TA  +     ASP+ LA  P     GA          + +++  A     A+R   +G        +        WG  +                                                          R LSS M +C+V L++G A AGDLL VLA FLE LPG+TD EL ILV A RL+H TL++ P A              XXXXXXXX                                                 E    +    G  +KR R E                           GG S+  G      XXXXXXXXXXXX  G T   G   +     + XXXXX          PP  +  +FIAG PM    G+    A+ + V              V +D       G G G   +G   E ++G R++ +LVA FH GV  GCPALVE  LQA  + IWD  G+ L +WG L D +SF+ VM SDL R  W++GA++L++L RNA +FR +A      +  D          P P+   P G +     AA+              +  A T+ TA PTP S   V+  G    GA              EG    G+SLLRRLCLDAV VG++A FG+DVGLRLS+++L F  CQ YG +AAR LFG DG R G                L+PALV FVRLELE WERR+YS+
Sbjct:  396 DGVAALRARLAEAQAKNAEALERVRELEENNFDLEAAMQMIEVEASHRVDRQAKALQSKLAFKDHQLTTARKDHTSAVRELNEERTKRKRXXXXXXXXXXEAVAAAAKAXXXXXXXXXXXXXGEPASRGSTSGEEGRRSGCGGIGVPRPAGQ--RGNEADTGPAP-AVSLAEVILSEMSDDVMVLLNAG-------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDQEPMSPSSITAAADAAPDSASPVRLA--PWEHRLGADEMAGDRLHSDTATDGEAEGPEFASRCSHEG-----EYFSDEGELSPEWGPEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELSSRMLSCMVSLLDGEAFAGDLLGVLAGFLETLPGDTDHELGILVSAARLVHLTLALTPPAARAVALADPDDVSDXXXXXXXXGGEEAAPVYRRLGL----------------------------------QEEEPIEGGPHGKGRKRGRSEL--------------------------GGASSQRGEEXXXXXXXXXXXXXXXXGLGVTVGGGDDGQAREGWEGXXXXXXXXXXXXXXXPPLPT--LFIAGVPMPSEVGVHGPVASGSKV--------------VSSD-------GGGSGESAAGEEAE-DLGRRIQDRLVAFFHHGVACGCPALVEVCLQATLTAIWDRQGSELLAWGDLVDSNSFNHVMTSDLFRPAWQVGAEVLSVLLRNADIFREIAVDKELEQQRDGEDHASPARRPRPSTEMPFGDVGDRSCAAA--------------EKSAKTDATAIPTPRSGATVLEGGNFRGGAGEAVAGDREGDLEDEGFGDYGDSLLRRLCLDAVAVGKYAPFGKDVGLRLSVIKLMFSACQAYGEEAARSLFGADGYRGGRSSLGXXXXXXXEGRELIPALVDFVRLELEDWERRKYSE 1302          
BLAST of mRNA_H-paniculata_contig2865.7810.1 vs. uniprot
Match: D7FVV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV4_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 1.010e-50
Identity = 205/606 (33.83%), Postives = 252/606 (41.58%), Query Frame = 0
Query:  547 RSLSSNMFTCIVDLVEGMACAGDLLDVLAAFLEELPGETDDELEILVGAVRLIHRTLSVLPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGFDADSDAKGNSKKRRRPESEDSCGNHEERSSDNDCHGEHEGGDGDGGDSNALGVVDGXXXXXXXXXXXXXXGPTTAAGQKPEMHHQKXXXXXXDDGVWSSSKLPPSSSCVVFIAGEPMAPRDGLASAPAAPASVWCAATVPRLPPATAVVADRLSDGKSGRGLGLGWSGRRGEGEIGARLKYQLVAVFHQGVFSGCPALVEAALQAVQSVIWDLDGATLASWGGLFDGDSFHEVMLSDLHRSTWELGAQILTILSRNAALFRWLATATP----GTEDEDPPPTLGYPSGLSSAIVAASXXXXXXXXXXXXXXKSVAATEVTAPPTPPSRVGVIAEGVIGEGAEGGXGG--------------GESLLRRLCLDAVTVGEHASFGEDVGLRLSIVRLAFCLCQRYGADAARPLFGEDGTRAGSG------------------------LLPALVTFVRLELEYWERRRYSQ 1110
            R LSS M +C+V L++G A AGDLL VLA FLE LPG+TD EL ILV A RL+H TL++ P A                                                                        G + +    G  K + R       G                                 XXXXXXXXXXXXXX      GQ  E            +G        P     +FIAG P+    G                VP    + AV +D       G G G   +G   E ++G R++ +LVA FH GV   CPALVE  LQA  S IWD  G  L +WG L D +SF+ VM SDL R  W++GA++L++L RNA +FR +A          E+ED       P   +    A                +  A T+ TA PTP S   V+  G  G GA   X                G+SLLRRLCLDAV VGE+A FG+DVGLRLS+++L F  CQ YG +AAR LFG DG R G                          L+PALV FVRLELE WERRRYS+
Sbjct:  316 RELSSRMLSCMVGLLDGEAFAGDLLGVLAGFLETLPGDTDHELGILVSAARLVHLTLALTPLAARTVALADPDDVSDVDEESGDGGGEEAAPVDRRL--------------------------------------GLEEEEPIAGGPKGKGRKXXXXXLG--------------------------XXXXXXXXXXXXXXXXXXXXXXXXXDEGQAREGW----------EGXXXXXXSTPPPLPTLFIAGVPVPSEVG--------------GDVPVTYGSKAVSSD-------GGGSGEPEAGEAAE-DLGRRIQDRLVAFFHHGVACDCPALVEVCLQATLSAIWDRQGPELLAWGDLVDSNSFNHVMSSDLFRPAWQIGAEVLSVLLRNADIFREIAVDNELEQQREEEEDQTSPARQPRSTTEMPSA------DVGDRGCGAAEKSAKTDATAIPTPRSGATVLDGGNFGGGAGEAXXXXXXXXXXXXXXXXFGDSLLRRLCLDAVAVGEYAPFGKDVGLRLSVIKLVFSACQAYGEEAARSLFGADGFRVGDEAEGXXXXXXXXXXXXXXXXXEVRELIPALVDFVRLELEDWERRRYSE 819          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2865.7810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY04_9PHAE2.440e-6835.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVV4_ECTSI1.010e-5033.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 216..250
NoneNo IPR availableCOILSCoilCoilcoord: 155..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2865contigH-paniculata_contig2865:368..10124 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2865.7810.1mRNA_H-paniculata_contig2865.7810.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2865 368..10124 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2865.7810.1 ID=prot_H-paniculata_contig2865.7810.1|Name=mRNA_H-paniculata_contig2865.7810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1114bp
ASGRARIQGGGRGNGEREARDAQRRQHSRSPVLRSEVQGCPDVRSMQANP
ILRDGARSAGQGSRREATAGAAGVKQRGRTDVLDGEVLTVDLTAPAAAYA
SSAPPLVSTGSNAAAAVSTRHVSRSSVHPPPSAPAASLEGEAKLRARLAQ
SETWNKEILERVAALEEANFDLEASIQMVEIEASHRVAKEAKAMQSELSF
RDHQLTIAQSSHTTAVKELNAERSKRKRDRQRAEREREEATAKAAAAIST
ANAAAAAASAAEQAAVAEAATALEKNEKAAAAAARRSAGSSTAANAKDAA
RPPFSITLAEIILSELADEVMVLLKATGNGAWGAEAGGVGEDGVLDFGGG
SESYGGGGDGGGGGGRDGSWLRSPLEVDMRRRGRSSSFSSSAALDATPPV
GARDYGAGDGGAASGSRYSGCRGTDSAPRQQGRATAGRNGDFRGASPLSL
AFTPVRASSGAAVPEAGMRRREWSSEHAARDDSCANRGWRQGGGGSGPPS
AGASWCDSNWGAADISPRHFGGVGFEGGRRVDDGMYVEQGERINAIRSLS
SNMFTCIVDLVEGMACAGDLLDVLAAFLEELPGETDDELEILVGAVRLIH
RTLSVLPAAAAAVAAGGAPRENCSGAVLSSSVAVALDSAAALLPPPVISD
SAGARGSNLFGAATAVAAAAGGASGGGGGSEGFDADSDAKGNSKKRRRPE
SEDSCGNHEERSSDNDCHGEHEGGDGDGGDSNALGVVDGGGGDGGGDGDG
DGGGPTTAAGQKPEMHHQKQRRKTNDDGVWSSSKLPPSSSCVVFIAGEPM
APRDGLASAPAAPASVWCAATVPRLPPATAVVADRLSDGKSGRGLGLGWS
GRRGEGEIGARLKYQLVAVFHQGVFSGCPALVEAALQAVQSVIWDLDGAT
LASWGGLFDGDSFHEVMLSDLHRSTWELGAQILTILSRNAALFRWLATAT
PGTEDEDPPPTLGYPSGLSSAIVAASAAGSCRGNAAQSASKSVAATEVTA
PPTPPSRVGVIAEGVIGEGAEGGGGGGESLLRRLCLDAVTVGEHASFGED
VGLRLSIVRLAFCLCQRYGADAARPLFGEDGTRAGSGLLPALVTFVRLEL
EYWERRRYSQVLC*
back to top