prot_H-paniculata_contig28635.7805.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28635.7805.1
Unique Nameprot_H-paniculata_contig28635.7805.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length43
Homology
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BLAST of mRNA_H-paniculata_contig28635.7805.1 vs. uniprot
Match: A0A6H5KIL5_9PHAE (ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL5_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 2.170e-9
Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    2 VRTTWFGPQVDAIEFYGTQLAEMNQRLRPKQEHKLEAAK 40
            VR +WFGP+ DA+ +YG +LAE+NQ+LRPKQE KLEAAK
Sbjct:   11 VRPSWFGPKEDAVRYYGLRLAEINQKLRPKQEAKLEAAK 49
[Close]
BLAST of mRNA_H-paniculata_contig28635.7805.1 vs. uniprot
Match: D7FMV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV8_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 9.280e-8
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0 
Query:    2 VRTTWFGPQVDAIEFYGTQLAEMNQRLRPKQEHKLE 37
            VR +WFGP+ DA+ +YG +LAE+NQ+LRPKQE KLE
Sbjct:  311 VRPSWFGPKEDAVRYYGLRLAEINQKLRPKQEAKLE 346
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28635.7805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KIL5_9PHAE2.170e-969.23ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FMV8_ECTSI9.280e-866.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28635contigH-paniculata_contig28635:1211..1339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28635.7805.1mRNA_H-paniculata_contig28635.7805.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28635 1211..1351 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28635.7805.1 ID=prot_H-paniculata_contig28635.7805.1|Name=mRNA_H-paniculata_contig28635.7805.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=43bp
MVRTTWFGPQVDAIEFYGTQLAEMNQRLRPKQEHKLEAAKVGY
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