prot_H-paniculata_contig28610.7797.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28610.7797.1
Unique Nameprot_H-paniculata_contig28610.7797.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
BLAST of mRNA_H-paniculata_contig28610.7797.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 90.5 bits (223), Expect = 4.080e-19
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    2 DKLVVGTKMIYKRKVSKDGNVEKYKYRLVAQGFRQIEGVHYTEKYSPTPAPASIRMLLATAAAKDGEKRHFKAEQAFLKVGIDEEVYIEIP 92
            D+ ++G+K ++K K   DG VEKYK RLVAQGF Q+EG+ Y E ++P     SIR+LLA AA  D E      + AFL   ++EE+Y+++P
Sbjct: 1035 DRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVP 1125          
BLAST of mRNA_H-paniculata_contig28610.7797.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI)

HSP 1 Score: 89.4 bits (220), Expect = 9.850e-19
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 0
Query:    2 DKLVVGTKMIYKRKVSKDGNVEKYKYRLVAQGFRQIEGVHYTEKYSPTPAPASIRMLLATAAAKDGEKRHFKAEQAFLKVGIDEEVYIEIPERF 95
            +K  +G K IYK K + DG++E+YK RLVAQGF QIEG+ Y E +SP     S+R  LA A AK  E        AFL   ++EEVY+++PE F
Sbjct:  121 EKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGF 214          
BLAST of mRNA_H-paniculata_contig28610.7797.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI)

HSP 1 Score: 88.2 bits (217), Expect = 2.610e-18
Identity = 44/94 (46.81%), Postives = 58/94 (61.70%), Query Frame = 0
Query:    2 DKLVVGTKMIYKRKVSKDGNVEKYKYRLVAQGFRQIEGVHYTEKYSPTPAPASIRMLLATAAAKDGEKRHFKAEQAFLKVGIDEEVYIEIPERF 95
            +K  +G K IYK K + DG++E+YK RLVAQGF QIEG+ Y E +SP     S+R  LA   AK  E        AFL   ++EEVY+++PE F
Sbjct:  590 EKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEMFSPVAKMTSVRWFLAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGF 683          
BLAST of mRNA_H-paniculata_contig28610.7797.1 vs. uniprot
Match: A5BCC7_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BCC7_VITVI)

HSP 1 Score: 87.8 bits (216), Expect = 3.590e-18
Identity = 44/94 (46.81%), Postives = 58/94 (61.70%), Query Frame = 0
Query:    2 DKLVVGTKMIYKRKVSKDGNVEKYKYRLVAQGFRQIEGVHYTEKYSPTPAPASIRMLLATAAAKDGEKRHFKAEQAFLKVGIDEEVYIEIPERF 95
            +K  +G K IYK K + DG++E+YK RLVAQGF QIEG+ Y E +SP     S+R  LA   AK  E        AFL   ++EEVY+++PE F
Sbjct:  844 EKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGF 937          
BLAST of mRNA_H-paniculata_contig28610.7797.1 vs. uniprot
Match: UPI001A1815EF (Uncharacterized protein n=1 Tax=Streptomyces albiflaviniger TaxID=114683 RepID=UPI001A1815EF)

HSP 1 Score: 85.9 bits (211), Expect = 4.650e-18
Identity = 46/94 (48.94%), Postives = 59/94 (62.77%), Query Frame = 0
Query:    2 DKLVVGTKMIYKRKVSKDGNVEKYKYRLVAQGFRQIEGVHYTEKYSPTPAPASIRMLLATAAAKDGEKRHFKAEQAFLKVGIDEEVYIEIPERF 95
            D+  VG K ++K+K   DGNV  YK RLVA+GFRQI+GV Y E YSP     S+R+LLA AA  D E      + AFL   ++EE+Y+  PE F
Sbjct:   14 DRKAVGCKWVFKKKTDADGNVTVYKARLVAKGFRQIQGVDYDETYSPVAMLKSVRILLAIAAFFDYEIWQMDVKTAFLNGNVEEELYMMQPEGF 107          
BLAST of mRNA_H-paniculata_contig28610.7797.1 vs. uniprot
Match: A0A2I0K762_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0K762_PUNGR)

HSP 1 Score: 80.9 bits (198), Expect = 2.100e-17
Identity = 40/93 (43.01%), Postives = 57/93 (61.29%), Query Frame = 0
Query:    3 KLVVGTKMIYKRKVSKDGNVEKYKYRLVAQGFRQIEGVHYTEKYSPTPAPASIRMLLATAAAKDGEKRHFKAEQAFLKVGIDEEVYIEIPERF 95
            K  +  K ++K K   DG+VE+YK RLVA+GF QIEG+ + E ++P     ++R LL  A AK  E  H   + AFL   +DEEVY+++P  F
Sbjct:   23 KQFIDCKWVFKIKRRADGSVERYKARLVAKGFTQIEGIDFHETFAPVAKLVTVRCLLTVAVAKGWEMHHMDVQNAFLHGNLDEEVYMKLPPGF 115          
BLAST of mRNA_H-paniculata_contig28610.7797.1 vs. uniprot
Match: A0A2Z7CXQ0_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CXQ0_9LAMI)

HSP 1 Score: 81.6 bits (200), Expect = 4.080e-17
Identity = 38/87 (43.68%), Postives = 58/87 (66.67%), Query Frame = 0
Query:    6 VGTKMIYKRKVSKDGNVEKYKYRLVAQGFRQIEGVHYTEKYSPTPAPASIRMLLATAAAKDGEKRHFKAEQAFLKVGIDEEVYIEIP 92
            +G K +YK K + DG++++YK RLVA+G+ QIEG  Y E +SPT    ++  LLA A++++    HF  +  FL   +DEEVY++IP
Sbjct:   26 IGCKWVYKIKYNSDGSIDRYKVRLVAKGYMQIEGTDYFETFSPTAKLTTVCCLLAIASSRNWFLSHFDVQNTFLHGDLDEEVYMDIP 112          
BLAST of mRNA_H-paniculata_contig28610.7797.1 vs. uniprot
Match: A0A2K3JLR7_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JLR7_TRIPR)

HSP 1 Score: 79.7 bits (195), Expect = 5.000e-17
Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 0
Query:    3 KLVVGTKMIYKRKVSKDGNVEKYKYRLVAQGFRQIEGVHYTEKYSPTPAPASIRMLLATAAAKDGEKRHFKAEQAFLKVGIDEEVYIEIPERF 95
            K +VG + +YK K    G VEKYK RLVA+GF QIEG  + E ++P     ++R LL+ A AK  E        AFL   ++EEVY+++P+ +
Sbjct:   23 KKIVGCRWVYKVKYKASGEVEKYKARLVAKGFTQIEGEDFNETFAPVAKMTTVRCLLSVAVAKGWELHQMDVSNAFLHGDLEEEVYMQVPDGY 115          
BLAST of mRNA_H-paniculata_contig28610.7797.1 vs. uniprot
Match: A0A6D2I3G7_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2I3G7_9BRAS)

HSP 1 Score: 80.5 bits (197), Expect = 6.960e-17
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    9 KMIYKRKVSKDGNVEKYKYRLVAQGFRQIEGVHYTEKYSPTPAPASIRMLLATAAAKDGEKRHFKAEQAFLKVGIDEEVYIEIPERF 95
            K ++K+K+  DGN++ YK RLVA+G++QI GV Y E YSP     SIR+LLATAA  D E      + AFL   ++E+VY+  PE F
Sbjct:   25 KWVFKKKIDMDGNIQIYKARLVAKGYKQIHGVDYDETYSPVAMLKSIRILLATAAYYDYEIWQMDVKTAFLNGKLEEDVYMIQPEGF 111          
BLAST of mRNA_H-paniculata_contig28610.7797.1 vs. uniprot
Match: A0A5K0WT86_9MAGN (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0WT86_9MAGN)

HSP 1 Score: 84.0 bits (206), Expect = 7.800e-17
Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    6 VGTKMIYKRKVSKDGNVEKYKYRLVAQGFRQIEGVHYTEKYSPTPAPASIRMLLATAAAKDGEKRHFKAEQAFLKVGIDEEVYIEIPERF 95
            VG K +YK K    GN+E+YK RLVA+GF Q+EG+ Y E YSP  A  S+R++LA  A  D E      + AFL   +DEEVY++ P+ F
Sbjct:  174 VGCKWVYKTKRDSKGNIERYKARLVAKGFTQMEGIDYNEIYSPVSAKESMRIVLALVAHFDLELHQMDVKTAFLNGDLDEEVYMDQPQGF 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28610.7797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK4.080e-1946.15Integrase catalytic domain-containing protein (Fra... [more]
A0A438GNV2_VITVI9.850e-1947.87Retrovirus-related Pol polyprotein from transposon... [more]
A0A438E4T4_VITVI2.610e-1846.81Retrovirus-related Pol polyprotein from transposon... [more]
A5BCC7_VITVI3.590e-1846.81Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
UPI001A1815EF4.650e-1848.94Uncharacterized protein n=1 Tax=Streptomyces albif... [more]
A0A2I0K762_PUNGR2.100e-1743.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2Z7CXQ0_9LAMI4.080e-1743.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2K3JLR7_TRIPR5.000e-1741.94Retrovirus-related Pol polyprotein from transposon... [more]
A0A6D2I3G7_9BRAS6.960e-1748.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5K0WT86_9MAGN7.800e-1747.78Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 5..93
e-value: 7.6E-18
score: 65.0
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..94
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 4..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28610contigH-paniculata_contig28610:1151..1438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28610.7797.1mRNA_H-paniculata_contig28610.7797.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28610 998..1438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28610.7797.1 ID=prot_H-paniculata_contig28610.7797.1|Name=mRNA_H-paniculata_contig28610.7797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
MDKLVVGTKMIYKRKVSKDGNVEKYKYRLVAQGFRQIEGVHYTEKYSPTP
APASIRMLLATAAAKDGEKRHFKAEQAFLKVGIDEEVYIEIPERF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like