prot_H-paniculata_contig2841.7752.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2841.7752.1
Unique Nameprot_H-paniculata_contig2841.7752.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length498
Homology
BLAST of mRNA_H-paniculata_contig2841.7752.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 1.040e-64
Identity = 207/567 (36.51%), Postives = 268/567 (47.27%), Query Frame = 0
Query:    1 MTALIAESSPLLPKIPSDPGIDTTRTFGFSPSSMPYSRYVAEGRVPQ---RQSPSPRAF-AGQTPSQYPRGTGYAITESFPCDDPGAPAPARIPRST---RPNCSTCRSYQG-CTCSS---DTNDLQAGGSREGXXXXXSSRGSGWCKDRARVGLSLGE---ESPSAGTKKQSAVTSTAATGTRAA------------RDVGVAKPFRKKSDWENLLGAVDLELRAQELGASNSAATTASPSKRSKTELGYAGRSSYGNINNGAGTCRVPLHPSGGGNCHSPSSAHIAGAI--IESDMEPKLKHHRRGGAEAAGGGPA--YSGSTADAACLLATLPQRML-----------------------AGVSAQPSCSPDVDTPISVTSSPSLAPVQAPAGPARVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEYDAARAYDHAAVQHFAEGAKLNFPGGLKEQLE-----------------AAARAPTVPPATHXXXXXXXXXXXXXXXXXXXXXXXVDDVVSGSSNRGQKRSYNDRYDDEEWVCDDGSWKNSRR 497
            MTALIA++SP+L  IPSDP     R+F FSPS MP S+Y++EG   Q   R SPSP  + A + P+ YP   GY I  SF   DP  PA A   +     +P  S+CR  +  C+C+S   +T    +  S        +S+G       AR     GE   + P A     +   S + +    A            R + +     KKSDWENLLGAVDLELRAQ+       +T A+P          A  +++ +  +       PL   GG      ++A ++     +++   P  +H                YSGSTADAACLLATLPQRML                                       + +     ++    P  P RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSE+DAARAYD AA+QHFAEGAKLNFP G++ QL                  AAA     PPAT+                          + S ++ R +K ++ D +D++ W  +DG W  SRR
Sbjct:    1 MTALIADTSPILRNIPSDPA--DRRSFEFSPSPMP-SQYLSEGTARQDHRRHSPSPHNYTAREVPALYPHRYGYNIGGSFAHSDPEVPAVAEKQQQQLAFKPT-SSCRCQRRQCSCNSSPSETAQKDSSSSEPPHAMWRNSKGGDANMTTARPSFFHGEAPAQQPPAAVSVSAPSRSPSPSAAILAQNRQQHSSRVLPRTIELTSSPSKKSDWENLLGAVDLELRAQQRSKFVPDSTPATPVP--SHHYARAINAAHLHYQHQPLDDAPPLLTGGGYTQQQRAAASVSPEFGPVKTAPAPAGRHXXXXXXXXXXXXXXXXYSGSTADAACLLATLPQRMLDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGIMPPALVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSVSGRPFATAGAGGAAAPRSCTPPATYLEGDAAAAPA----------------LPSPTAKRSRKTAFGD-HDEDGWAREDGPWHPSRR 544          
BLAST of mRNA_H-paniculata_contig2841.7752.1 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 1.750e-52
Identity = 171/470 (36.38%), Postives = 212/470 (45.11%), Query Frame = 0
Query:    1 MTALIAESSPLLPKIPSDPGIDTTRTFGFSPSSMPYSRYVAEGRVPQ---RQSPSPRAF-AGQTPSQYPRGTGYAITESFPCDDPGAPAPAR--------IPRSTRPNCSTCRSYQGCTCSSDTNDLQAGGSREGXXXXXSSRGSGWCKDRARVGLSLGE---ESPSAGTKKQSAVTSTAATGTRAA------------RDVGVAKPFRKKSDWENLLGAVDLELRAQELGASNSAATTASPSKRSKTELGYAGRSSYGNINNGAGTCRVPLHPSGGGNC----------HSPSSAHIAGAIIESDMEPKLKHHRRGGAEAAGG---GPAYSGSTADAACLLATLPQRMLAGVSAQPSCSPDVDTPISVTSSPSLAPVQAPAGPARVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEYDAARAYDHAAVQHFAEGAKLNFPGGLKEQLEAAARAPT 430
            MTALIA++SP+L  IPSDP     R+F FSPS MP ++Y++EG   Q   R SPSP ++ A + P+ YP   GY +  SF   DP  P                                   T    +  S        +S+G       AR GL  GE   + P A     +   S + +    A            R + +     KKSDWENLLGAVDLELRAQ+       +T A+P         +A  +++ +  +       PL                  H P++A ++         P  +H              GPAYSGSTADAACLLA                                              SGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSE+DAARAYD AA+QHFAEGAKLNFP G++ QL   + A T
Sbjct:    1 MTALIADTSPILRNIPSDPA--DRRSFEFSPSPMP-AQYLSEGTASQDHRRHSPSPHSYTAREVPALYPHRYGYNMGGSFAHSDPQVPVAVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAQKDSSSSEPPHAMWRNSKGGDANMTTARPGLFHGEAPAQQPPAAVSVSAPSRSPSPSAAILAQNQQQHSSRVMPRTIELTSSPAKKSDWENLLGAVDLELRAQQRSEFVPDSTPATPVP--SHHYAHAINAAHLHHQHQPLDDAPPLLTGXXXXXXXXXXXXYTQHQPAAASVSPEFGPIKTAPAARHXXXXXXXXXXXXXXGPAYSGSTADAACLLA----------------------------------------------SGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSADT 419          
BLAST of mRNA_H-paniculata_contig2841.7752.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 117 bits (294), Expect = 2.380e-26
Identity = 53/78 (67.95%), Postives = 69/78 (88.46%), Query Frame = 0
Query:  346 RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEYDAARAYDHAAVQHFAEGAKLNFPGGLKEQLE 423
            RVQ++GRRGPRGQS+FKGVC+TRAGKWR+VIY+GRKQ YLGVF++E +AA+AYD++AV++F +GA LNFP G    +E
Sbjct:  137 RVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNFPDGRHTVVE 214          
BLAST of mRNA_H-paniculata_contig2841.7752.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 117 bits (294), Expect = 3.180e-26
Identity = 53/78 (67.95%), Postives = 69/78 (88.46%), Query Frame = 0
Query:  346 RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEYDAARAYDHAAVQHFAEGAKLNFPGGLKEQLE 423
            RVQ++GRRGPRGQS+FKGVC+TRAGKWR+VIY+GRKQ YLGVF++E +AA+AYD++AV++F +GA LNFP G    +E
Sbjct:  150 RVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNFPDGRHTVVE 227          
BLAST of mRNA_H-paniculata_contig2841.7752.1 vs. uniprot
Match: A0A835Z3I9_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.960e-26
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0
Query:  348 QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEYDAARAYDHAAVQHFAEGAKLN 413
            QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGV+DSE  AARAY+ +A++HF  GAKLN
Sbjct:  227 QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVYDSELQAARAYNDSALEHFGAGAKLN 292          
BLAST of mRNA_H-paniculata_contig2841.7752.1 vs. uniprot
Match: D7FLT6_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT6_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 9.220e-19
Identity = 53/84 (63.10%), Postives = 61/84 (72.62%), Query Frame = 0
Query:  352 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEYDAARAYDHAAVQHFAEGAKLNFPGGLKEQLEAAARAPTVPPAT 435
            RRGP GQS FKGVCIT AG WRAVIY+ RKQKYLGVFDSE+DAARAYD AA  H   G++LN P  ++ +L   + A   P AT
Sbjct:  304 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAARVH-CPGSQLNNPDQIERELYELSAADGKPFAT 386          
BLAST of mRNA_H-paniculata_contig2841.7752.1 vs. uniprot
Match: A0A6H5KY97_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY97_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.140e-18
Identity = 52/84 (61.90%), Postives = 62/84 (73.81%), Query Frame = 0
Query:  352 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEYDAARAYDHAAVQHFAEGAKLNFPGGLKEQLEAAARAPTVPPAT 435
            RRGP GQS FKGVCIT AG WRAVIY+ RKQKYLGVFDSE+DAARAYD AA + +  G++LN P  ++ +L   + A   P AT
Sbjct:  421 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYD-AAARVYCPGSQLNNPDQIERELHELSAADGKPFAT 503          
BLAST of mRNA_H-paniculata_contig2841.7752.1 vs. uniprot
Match: A0A835YVU4_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVU4_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 4.790e-17
Identity = 50/78 (64.10%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  349 ASGRRGPRGQSRFKGVCITRAGKWRAVI-------------YIGRKQKYLGVFDSEYDAARAYDHAAVQHFAEGAKLN 413
            A  RRGPRGQSRFKGVCITRAGKWRAVI             +IGR+QKYLGVFDSE  AA AY+ +A Q F   AKLN
Sbjct:  187 AKSRRGPRGQSRFKGVCITRAGKWRAVICEWLAAVAEFLHNHIGRRQKYLGVFDSEVQAAVAYNESAKQFFGAEAKLN 264          
BLAST of mRNA_H-paniculata_contig2841.7752.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.510e-15
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
Query:  361 FKGVCITRAGKWRAVIYIGRKQKYLGVFDSEYDAARAYDHAAVQHFAEGAKLNF 414
            ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA QHF + A +NF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54          
BLAST of mRNA_H-paniculata_contig2841.7752.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.170e-15
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
Query:  352 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEYDAARAYDHAAVQHFAEGAKLNF 414
            RRG +G+S ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA  HF   A +NF
Sbjct:   22 RRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2841.7752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQM0_9PHAE1.040e-6436.51AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D8LFR4_ECTSI1.750e-5236.38Pathogenesis-related transcriptional factor and ER... [more]
A0A6V1UZI2_HETAK2.380e-2667.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6J2_HETAK3.180e-2667.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z3I9_9STRA4.960e-2684.85AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
D7FLT6_ECTSI9.220e-1963.10AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KY97_9PHAE1.140e-1861.90AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A835YVU4_9STRA4.790e-1764.10AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CH07_9STRA1.510e-1566.67AP2/ERF domain-containing protein (Fragment) n=1 T... [more]
A0A836CI56_9STRA3.170e-1563.49AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 360..421
e-value: 4.8E-10
score: 49.4
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 360..415
score: 13.38
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 359..416
e-value: 4.5E-12
score: 47.6
NoneNo IPR availablePANTHERPTHR32467:SF103coord: 355..426
NoneNo IPR availablePANTHERPTHR32467FAMILY NOT NAMEDcoord: 355..426
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 359..415

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2841contigH-paniculata_contig2841:6986..9242 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2841.7752.1mRNA_H-paniculata_contig2841.7752.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2841 6620..9509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2841.7752.1 ID=prot_H-paniculata_contig2841.7752.1|Name=mRNA_H-paniculata_contig2841.7752.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=498bp
MTALIAESSPLLPKIPSDPGIDTTRTFGFSPSSMPYSRYVAEGRVPQRQS
PSPRAFAGQTPSQYPRGTGYAITESFPCDDPGAPAPARIPRSTRPNCSTC
RSYQGCTCSSDTNDLQAGGSREGGGGGGSSRGSGWCKDRARVGLSLGEES
PSAGTKKQSAVTSTAATGTRAARDVGVAKPFRKKSDWENLLGAVDLELRA
QELGASNSAATTASPSKRSKTELGYAGRSSYGNINNGAGTCRVPLHPSGG
GNCHSPSSAHIAGAIIESDMEPKLKHHRRGGAEAAGGGPAYSGSTADAAC
LLATLPQRMLAGVSAQPSCSPDVDTPISVTSSPSLAPVQAPAGPARVQAS
GRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEYDAARAYDH
AAVQHFAEGAKLNFPGGLKEQLEAAARAPTVPPATHGGGGSGGAAAARAA
TPPPFEEEPVDDVVSGSSNRGQKRSYNDRYDDEEWVCDDGSWKNSRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf