prot_H-paniculata_contig2829.7723.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2829.7723.1
Unique Nameprot_H-paniculata_contig2829.7723.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length767
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2829.7723.1 vs. uniprot
Match: D7FR44_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR44_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 9.830e-12
Identity = 107/311 (34.41%), Postives = 149/311 (47.91%), Query Frame = 0 
Query:    9 LSADEIAYLEQVFVSIADDWQKPRVSVAQALECLEQMDFLVTGESADLIRAVVPASATADSLDLQDVIKVASLVKAKDTA---PSASYLDRDDSLVELENSFKSQMAAGQ--SDLKETNLFXXXXXXXXXXXXXXXXXXXXQIPDTVAEEVEAPKSPVG------PLTSATGFASITPSDAPVMRRRSIAVTVPTLSLVPGPSPPRSESLKVFQREYASLEGPEPKQVDVPQRRSSLNTRPGNSALIDAPNIVPT------NFEDSPLPLSQQELAKQESEAELLASVGGLSAELVTESDLPVKRRSVCLT 302
            L +DE+ ++ + F    D     R++VA+ + CL+QMDF++ G   DLIR+VVPA+   D L L D IKVA+  K ++     P    + R+ SL ELE+SF  ++  G+  +D  E         XXXXXXXXXXXXXXX             + P G      P  +A G A       PV RRRSIA   P  S     +P  +     F   +   + PE      P+RR S+ +    S      + VP       + +DS LP S  E+    SE ELL S G L  E V  S +P +RRS+ ++
Sbjct:  141 LDSDELDFVRRQFKD-GDVKSDGRINVAKLMACLKQMDFILEGSPKDLIRSVVPAAMDVDRLSLNDAIKVATAAKTQEQGSAPPQRPGIGREGSLAELESSFNKRIMLGEITADAIEEEPRVPSVGXXXXXXXXXXXXXXXXXXXXXXXXXXIVEGPAGIESAPPPAVAAVGLA------VPV-RRRSIAGNHPVPSSPSTTAPWPTSRGSSFSSAHGQGQEPEVVVDKFPKRRMSVASSGSGSLKGIRADSVPGPGGGRGDDDDSTLPASP-EMLTMTSEMELLDSAGSLGVEPVITSAVP-RRRSITVS 441
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2829.7723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR44_ECTSI9.830e-1234.41EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 443..486
NoneNo IPR availableCOILSCoilCoilcoord: 502..550
NoneNo IPR availableCOILSCoilCoilcoord: 560..618
NoneNo IPR availableCOILSCoilCoilcoord: 321..348

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2829contigH-paniculata_contig2829:2476..16238 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2829.7723.1mRNA_H-paniculata_contig2829.7723.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2829 1125..16361 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2829.7723.1 ID=prot_H-paniculata_contig2829.7723.1|Name=mRNA_H-paniculata_contig2829.7723.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=767bp
MTSQESEHLSADEIAYLEQVFVSIADDWQKPRVSVAQALECLEQMDFLVT
GESADLIRAVVPASATADSLDLQDVIKVASLVKAKDTAPSASYLDRDDSL
VELENSFKSQMAAGQSDLKETNLFNRDDSLMELENSFKSQMAAGQIPDTV
AEEVEAPKSPVGPLTSATGFASITPSDAPVMRRRSIAVTVPTLSLVPGPS
PPRSESLKVFQREYASLEGPEPKQVDVPQRRSSLNTRPGNSALIDAPNIV
PTNFEDSPLPLSQQELAKQESEAELLASVGGLSAELVTESDLPVKRRSVC
LTPARGYDGLSDGGSEEPVDAEEIKQQLAEAEAEAIRQSEAVREAKENAR
VRAEVEAALEGLRSAVERDAALTLAAEKAERRATEAAVHLAGLESARIRA
EVESVLTSMMDLLEHEVAISRATQEAESRAAEAAAAAAVEMEVRVSEELN
ARLAAEVEAAKNAQRAEEALRLVAIAEDQAQKREAQLVAATKAAEAERLA
LLQAEDDSRSKAEAEAKEQQAEGERIAVERLALEEEMWDLRSQLQEAGEE
AKERAREDAEAQAVASAVALEEEKAKVEREKMVMAGATEKVEREGKARAH
AEKEAKEWKEKFEAMQREEEVREGKATVAAAVEEARKFEEKKARNIKAAR
EEGSTETEMNVDYESIGGNWWQCLTCTTNVRDQNQSQPKTLADRTDFCGG
VHDVGVSQDNDEDIDDDYVAAVSKVKRENWKSSSARSIGSKKSLKSNRSN
RDKESRPKDGDVCSVM*
back to top