prot_H-paniculata_contig28251.7716.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28251.7716.1
Unique Nameprot_H-paniculata_contig28251.7716.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length196
Homology
[Close]
BLAST of mRNA_H-paniculata_contig28251.7716.1 vs. uniprot
Match: A0A151ITN2_9HYME (Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151ITN2_9HYME)

HSP 1 Score: 56.6 bits (135), Expect = 5.120e-6
Identity = 46/166 (27.71%), Postives = 75/166 (45.18%), Query Frame = 0 
Query:    7 QRDGPNVYCRRCDKRGHDLYAC-PQLADEDACLTEAEIKIELEEALKIDLDEDEFIASYIASTSTTGKEEVLSVDSEGLEYCEVGEMEIWICDNGATKHMTHDSDFLFDYQEC-DGHVRLADGNRLPIEGVGMLFLQFRFDSEVVLMKLTQVASVPLLSHHLLSLG 170
            +R    + C  C K GH +  C  +  DED  +   E +   E                 ++T      EV+  +   LE       ++WI D+GA++HMTH S+++ + Q   D HV L DG +  + G G +++Q   D + +   L  V  VP L+ +L S+G
Sbjct:  221 ERSKKEIECFYCHKLGHYIKDCRKKRRDEDQGIRSKEKQKNNE-----------------SNTEAAFSAEVIEKEILNLEV-----KDVWILDSGASRHMTHRSNWISNLQTYKDEHVSLGDGTKCKVHGRGTVYIQRLVDGQWLDGVLEDVLYVPDLNKNLFSVG 364
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28251.7716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A151ITN2_9HYME5.120e-627.71Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28251contigH-paniculata_contig28251:434..1021 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28251.7716.1mRNA_H-paniculata_contig28251.7716.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28251 434..1021 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28251.7716.1 ID=prot_H-paniculata_contig28251.7716.1|Name=mRNA_H-paniculata_contig28251.7716.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
RSKDHLQRDGPNVYCRRCDKRGHDLYACPQLADEDACLTEAEIKIELEEA
LKIDLDEDEFIASYIASTSTTGKEEVLSVDSEGLEYCEVGEMEIWICDNG
ATKHMTHDSDFLFDYQECDGHVRLADGNRLPIEGVGMLFLQFRFDSEVVL
MKLTQVASVPLLSHHLLSLGKFADFGHGYRCSREGLRINLKTGRVL
back to top