prot_H-paniculata_contig282.7696.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig282.7696.1
Unique Nameprot_H-paniculata_contig282.7696.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1502
Homology
BLAST of mRNA_H-paniculata_contig282.7696.1 vs. uniprot
Match: D8LKW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW2_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 8.350e-133
Identity = 446/1297 (34.39%), Postives = 597/1297 (46.03%), Query Frame = 0
Query:    2 ETGPSASDLIVEVVEKVAT----GGGGHNDEGSVNVGDAPKKAIIELLHHVVTQVVTSSAT--GRMSGKGTSTKSSAVHLTSFLMQACSALPYYMLLFSKDLLRLSDSRSCAARKLCLSALAVALEHG-------GDCCREPSLASLLHFARSDGDATIRCAAFSYAAEYLGKFLRWQLKIVLSPLHSRRLS-----------------CMCKPCNWSFSNRIFPPSSTHKIRIPGES----ARRDLSFNHE-----DWFADNDESTDQVHDQEHRNGECANLEEA--EQERAQTAQDVQSGGKEES------HNPGVEPAVPRNADALSAAGRDN---------PWAQGGILLVALSVAASALLTDDSKAVRSKALACCTRILERHGDSLGEDGHALSNL-----------GSMESVIPVLLTVEQGAWAALENLAGTNSAG---RGTANTTS------KAADAARELLCLIPYNDTGGSSRRVVDLLLCYMRCQPSRA-GATSTLEMMEAKRALRALATEKFCCGIAALLGAISSVMAIGMGEKGTMSGTYSGNDGTNGENAYQEEGEGSAF------CELLMGVDVNLTTSLLQDALDLFASAETTSDRE------STIALLHAIVLLGEATSSGDHSAAREYLTDKENNDKTSRGAGNTKPSICSVAG-------DQALRSLASHNRLFWRALEKCMGQLAGAEESSDACVNHEDGEEGGAT--SITIASRTISTGKEGILNRKSFMLDVQTELAGLLDVFRLLAGRSLLSTQSETALEALVFPAVLSKRRLIRPAVGLALVLEEPRRVLLSSLAVLQDAGFARSSTDVARACDYVHLIGVLARENASFIAAHVGRQYEAFRSTTNWGQRRNAHEDGEQPQKDTVRVDQNPEGRGDGNGDDGDNNDDYMAGVSSRESMEREIRRLQ-EASVTSDGILSCYTPFLLAIVQQRLADATERSRMLSQPAIPERSGLPKDGNDGTFPRNPTTDAIGSGSIRQELDQQIHGDDRTSLRLLETSCPPSLAMEALWALSEYAVLSPFLATTQVLPLVEALAMNTQENLLVRYAAACIFTRRELATDAIAARACALLEDPDPLLRTKVLVRLGRLMQESRIKTAHLSRFALLLVDEDERVRMAAEVLFFEHVQPRPDSVSRCVFETYFTLDTEEDVKQRVLKSLIAVSSKAVPGQSLASLGGALVRKATETDDVGAAFFLSLVPPTVRRSLEATEVCLRRGHISHMSQEAVSLLGDHFAKGFCVGGRQSIGGGGGEGSRRAVGESSTLLPKAKALEMSARI 1199
            ETGP+A+DL +E+++++      GGGG    GS+   D  K A+I+LLHHVV +VVTS  T  GR   KG        HL SFL+ A S LP Y L+F+KDLL L++S S  ARK+ L+ LA  L HG       G    +P+LA++L  +RSDGDAT+R +AF   A+++G+        V S L+ +RL                   +      + +  +    ST      G      AR   +   E     D  A++    D     E R    A    A  +      A   +  G+ ++      H  G      R A A S   R           PWA GG L  +LS AA ALLTD SKAVR+KALAC  RILE HG ++   G +  N            G    V  +L  V +GA AALE LAG N+ G   + + N+T       KAAD AR LL L P  ++       VDL++CY RC+ +   G    +   EAKRALR +A   FC  I  L  A+S +MA     +G   G+ + +        + +  EG++F      CE+L GVD     SLL DAL+ +A+ +  + R+      S   LL  + LL EAT    +          E N     G  + +  +   +G       ++ LR+LA    LFWR LE+ M  +   +   +      +G+ G      + ++      G       +S   D  +EL+ LL +F+LLA RSLLS ++  ALEALVFPA LS+RR                                        ACDYV LIGVLARENASFIAAH+  QY A R  +  G+  +A E+GE                           DDYMAGVS+RE+M       + E                          A   SR  +Q  +  R      G             + +   R+++ Q         + L  +SCP +L  EALWALSEYAVLS  LA  +VLPL E LA +T E+  VR AA  + TRRELATD IAA AC+LLED +P LR +VLVRLG+L++ESR                                         C+FETYFTLD EE VK++VL+ L+AV+ +A PGQ L SLG ALVRK  E  D  AAFFLSLVPPTV  S EA EV  RRG ++      +SL+  HF++G   G   S+       +  A       L KA+ALEM+ARI
Sbjct:  122 ETGPAATDLTLEILQRIIRKADEGGGG----GSIRSNDTSKNAVIDLLHHVVAEVVTSGVTKGGRRGAKGP-----PAHLISFLVNAFSTLPEYALVFAKDLLVLTESSSSPARKMSLAILASILGHGRELGAQCGGTILDPALAAVLRLSRSDGDATVRSSAFDSVAKFIGE--------VESTLYRQRLDDDDDTSSDLDDGTPSGDVLAHQQPRNTAETLTDDDSTGSGAGGGRGVTHGARATETMEMEIAPRGDGAANHAGDADACPLSEKRPSATARTPAACTQMGAMHGATSGRQSGEGDTPVTSRQHTTGHAHRETREAGAASEGNRGQRRKAKVSAGPWAVGGALQSSLSAAAEALLTDGSKAVRAKALACLLRILEVHGGTIKPRGASCENTTGDKAGSAAAPGVSSRVETILSAVAKGALAALEPLAGDNTGGPTIQASLNSTGGGGRHRKAADTARALLVL-PCIESSP-----VDLVMCYARCRVAPGVGEGEAVGATEAKRALREIAQATFCADIRKLWKAVSVIMAADERRQGLEDGSANID--------FADTTEGASFPLSEVLCEVLAGVDSGAIASLLCDALEAYAAEDEIAPRDRDGAAASAPVLLRTLALLAEATGHAKNGV-------DERNGARQPGGSSNRERLAGRSGQHGAGDEEEQLRTLAGSQGLFWRRLEQRMEDIERDKRGEETGGRGVEGDRGQLRRRGVGVSVEQYHGGXXXXXXXRSAASDTISELSELLRMFQLLATRSLLSPENGAALEALVFPAALSRRR----------------------------------------ACDYVRLIGVLARENASFIAAHIREQYSA-RCLSRPGEEESA-ENGE---------------------------DDYMAGVSNREAMGAATTAEEGEXXXXXXXXXXXXXXXXXXXXDGDCGGARVGSRGDAQDEMQYRMAQQDGGK------------VEATVFREDVGQDRGATAAAGVSLPASSCPRALCTEALWALSEYAVLSAGLAAAEVLPLAERLASDTLEHPQVRNAAVGVLTRRELATDEIAAHACSLLEDENPCLRREVLVRLGQLIKESR-----------------------------------------CLFETYFTLDAEEAVKRKVLQRLVAVAREAAPGQGLESLGSALVRKVAEAGDSEAAFFLSLVPPTVN-SFEAAEVAHRRGQLAQSPHGTISLVAAHFSRGAQRGAGSSLA----TTASIAGRGGGAPLSKAQALEMAARI 1253          
BLAST of mRNA_H-paniculata_contig282.7696.1 vs. uniprot
Match: A0A6H5KWW9_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWW9_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 9.870e-80
Identity = 188/400 (47.00%), Postives = 238/400 (59.50%), Query Frame = 0
Query:  842 ILSCYTPFLLAIVQQRLADATERSRMLSQPAIPERS---------------------------------GLPKDGNDGTFPRNPTTDA--IGSGSIRQELDQQIHGDDRTSLRLLETSCPPSLAMEALWALSEYAVLSPFLATTQVLPLVEALAMNTQENLLVRYAAACIFTRRELATDAIAARACALLEDPDPLLRTKVLVRLGRLMQESRIKTAHLSRFALLLVDEDERVRMAAEVLFFEHVQPRPDSVSRCVFETYFTLDTEEDVKQRVLKSLIAVSSKAVPGQSLASLGGALVRKATETDDVGAAFFLSLVPPTVRRSLEATEVCLRRGHISHMSQEAVSLLGDHFAKGFCVGGRQSI-------GGGGGEGSRRAVGESSTLLPKAKALEMSARI 1199
            +LSCYTPFLLAIV++R+AD      + ++     ++                                 G   D +D T       D   + +   R++  Q        S+ L  +SCP +L  EAL ALSEYAVLS  LA  +VLPL E LA +T E+  VR AA  + TRRELATD IAA AC+LLED +P +R +VLVRLG+LM+ESRIKT HLSRFALLLVD  E VR AA+ +F +H+QPRPD+V RC+FET+FTLD EE VK++VL+ L+AV+ +A PGQ L SLGGALVRKA ET D  AAFFLSLVPPTV  S EA EV LRRG ++      + L+  HF++G   G   S+       G GGG             L KA+ALEM+A+I
Sbjct:    1 MLSCYTPFLLAIVRRRVADTAAARNVTAEKGAATKAEXXXXXXXXXXXXXXXXASAGGAADGDCDEARVGSGGDAHDETRLHVVQQDGGKVEATDFRKDGGQGRGATTAASVSLPASSCPRALCTEALRALSEYAVLSAGLAAAEVLPLAEGLASDTLEHPQVRNAAVGVLTRRELATDEIAAHACSLLEDENPCVRREVLVRLGQLMKESRIKTGHLSRFALLLVDVSEGVRQAAQKVFIDHLQPRPDTVCRCLFETFFTLDAEEAVKRKVLQRLVAVAREAAPGQGLESLGGALVRKAAETGDSEAAFFLSLVPPTVN-SFEAAEVALRRGQLAQSPHATIFLVATHFSRGAQRGAGSSLAITASVAGRGGG-----------APLSKAQALEMAAQI 388          
BLAST of mRNA_H-paniculata_contig282.7696.1 vs. uniprot
Match: A0A6H5L3C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C3_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.550e-36
Identity = 236/838 (28.16%), Postives = 322/838 (38.42%), Query Frame = 0
Query:   94 SKDLLRLSDSRSCAARKLCLSALAVALEHG-------GDCCREPSLASLLHFARSDGDATIRCAAFSYAAEYLGKF----LRWQLKI----------------VLSPLHSRRLSCMCKPCNWSFSNRIFPPSSTHKIRIPGESARRDLSFNHEDWFADNDESTDQVHDQEHRNGECANLEEAEQERAQTAQDVQSGGKEESHNPGVEPA--------VPRNADALSAAGRDN---------PWAQGGILLVALSVAASALLTDDSKAVRSKALACCTRILERHGDSLGEDG---------------------------------------------------------------------------------------------HALSNLGSMESVIPVL----LTVEQGAWAALENLAGTNSAGRGTA---NTTS------KAADAARELLCLIPYNDTGGSSRRVVDLLLCYMRCQ-PSRAGATSTLEMMEAKRALRALATEKFCCGIAALLGAISSVMAIGMGEKGTMSGTYSGNDGTNGENAYQEEGEGSAFC------ELLMGVDVNLTTSLLQDALDLFASAETTSDRESTIALLHAIVLLGEATSSGDHSAAREYLTDKENNDKTSRGAGNTKPSICSVAGDQALRSLASHNRLFWRALEKCMGQLAGAEESSDACVNHEDGEEGG----ATSITIASRTISTGKEGIL-----NRKSFMLDVQTELAGLLDVFRLLAGRSLLSTQSETALEALVFPAVLSKRRLIRPAVGLALVLEEPRRVLLSSLAVLQDAGFARSSTDVARACDYVHLIGVLARENASFIAAHVGRQY 765
            ++DLL L++S S  ARK+ L+ LA  LEHG       G    +P+LA+LL  ARSDGDAT+R +AF   A+++G+      R +L                  VL+   SR  +                   TH  R   E+   +++ + E   AD+    D     E      A    A  +              +   P + P           R A A S   R           PW  GG L  +LS AA ALLTD SKAVR+KALAC   ILE HGD++   G                                                                                             H   +L   E  +P+     + V +GA  ALE LAG N  G  T    N+T       KAAD AR LL ++P  +        V+L++CY RC+  S  G    +   EAKRALR +A   F   I  LL A+S +MA     +G   G+ + N        + +  EG++F       E+L GVD     SLL DAL+ +A+ +  + R+                  G+      Y +D+E                      + LR+LA    LFWR LE+ M  +   E   ++      G+ G        ++I       G            +S   D  +EL+ LL +F+LLA  SLLS ++  ALEALVFPA LS+RRLI                +  S+ +     F       +RACDYV LIGVLARENASFIAAHV  QY
Sbjct:   11 TQDLLALTESSSSPARKMSLAVLAAILEHGRELGAQCGGTILDPALAALLRLARSDGDATVRSSAFDSIAKFIGQMGTTLYRQRLHDNDDTSSDLDDGTPSGDVLAHQQSRSTAEALTDXXXXXXXXXXXRGVTHGARAT-ETMDMEIAPS-ERGAADHAGDADACPLSEKIPSATARTPMARTQMGAMHGATSGRQSRQGRTPVISPQHTSDRAHRATRGAGAPSEGNRGQRREAKVSAGPWTMGGALQSSLSAAAEALLTDGSKAVRAKALACSLLILEVHGDTIQPRGACCENTAGDEAGSAAGPGVSSRVERTLSTASSRCGGILILMAFLRSQRRLPRSSVDFASRPCMSGIAILCPSLRKRDLRQRCFPYTRGSFTWVHLSKSLVVQEPFLPLSTLCRVQVAKGALLALEALAGDNHGGSTTQASLNSTGGGGRHRKAADTARALL-ILPCVEPSP-----VELVMCYARCRVASGVGEGEAVGATEAKRALREIAQATFSADIRKLLKAVSVIMAADERRQGLEDGSANIN--------FADTTEGASFSLSEVLGEVLAGVDSGAIASLLCDALEAYAAEDEIAPRDRD----------------GETRKYSNYNSDEE----------------------EQLRTLAGSQGLFWRRLEQRMEDIERDERREESGWQGAQGDRGQLRRRGLGLSIEQYHGGGGXXXXXXXXXHGHRSAAPDAVSELSELLRIFQLLATYSLLSAKNSAALEALVFPAALSRRRLI----------------VSRSIDIHNSFAFLVLVWG-SRACDYVRLIGVLARENASFIAAHVREQY 777          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig282.7696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKW2_ECTSI8.350e-13334.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWW9_9PHAE9.870e-8047.00Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L3C3_9PHAE1.550e-3628.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 245..265
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 292..310
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..291
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 311..447
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 469..1501
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 448..468
IPR026971Condensin subunit 1/Condensin-2 complex subunit D3PANTHERPTHR14222CONDENSINcoord: 992..1050
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 87..1082

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig282contigH-paniculata_contig282:14030..27052 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig282.7696.1mRNA_H-paniculata_contig282.7696.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig282 13592..27955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig282.7696.1 ID=prot_H-paniculata_contig282.7696.1|Name=mRNA_H-paniculata_contig282.7696.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1502bp
METGPSASDLIVEVVEKVATGGGGHNDEGSVNVGDAPKKAIIELLHHVVT
QVVTSSATGRMSGKGTSTKSSAVHLTSFLMQACSALPYYMLLFSKDLLRL
SDSRSCAARKLCLSALAVALEHGGDCCREPSLASLLHFARSDGDATIRCA
AFSYAAEYLGKFLRWQLKIVLSPLHSRRLSCMCKPCNWSFSNRIFPPSST
HKIRIPGESARRDLSFNHEDWFADNDESTDQVHDQEHRNGECANLEEAEQ
ERAQTAQDVQSGGKEESHNPGVEPAVPRNADALSAAGRDNPWAQGGILLV
ALSVAASALLTDDSKAVRSKALACCTRILERHGDSLGEDGHALSNLGSME
SVIPVLLTVEQGAWAALENLAGTNSAGRGTANTTSKAADAARELLCLIPY
NDTGGSSRRVVDLLLCYMRCQPSRAGATSTLEMMEAKRALRALATEKFCC
GIAALLGAISSVMAIGMGEKGTMSGTYSGNDGTNGENAYQEEGEGSAFCE
LLMGVDVNLTTSLLQDALDLFASAETTSDRESTIALLHAIVLLGEATSSG
DHSAAREYLTDKENNDKTSRGAGNTKPSICSVAGDQALRSLASHNRLFWR
ALEKCMGQLAGAEESSDACVNHEDGEEGGATSITIASRTISTGKEGILNR
KSFMLDVQTELAGLLDVFRLLAGRSLLSTQSETALEALVFPAVLSKRRLI
RPAVGLALVLEEPRRVLLSSLAVLQDAGFARSSTDVARACDYVHLIGVLA
RENASFIAAHVGRQYEAFRSTTNWGQRRNAHEDGEQPQKDTVRVDQNPEG
RGDGNGDDGDNNDDYMAGVSSRESMEREIRRLQEASVTSDGILSCYTPFL
LAIVQQRLADATERSRMLSQPAIPERSGLPKDGNDGTFPRNPTTDAIGSG
SIRQELDQQIHGDDRTSLRLLETSCPPSLAMEALWALSEYAVLSPFLATT
QVLPLVEALAMNTQENLLVRYAAACIFTRRELATDAIAARACALLEDPDP
LLRTKVLVRLGRLMQESRIKTAHLSRFALLLVDEDERVRMAAEVLFFEHV
QPRPDSVSRCVFETYFTLDTEEDVKQRVLKSLIAVSSKAVPGQSLASLGG
ALVRKATETDDVGAAFFLSLVPPTVRRSLEATEVCLRRGHISHMSQEAVS
LLGDHFAKGFCVGGRQSIGGGGGEGSRRAVGESSTLLPKAKALEMSARIE
AMLEENKRRSRDAHPTSSNSNRRKLAVGPAVAAHGSRGAAAAVIGGGRVD
STSRTRNQQRGKQEQNVVDDIVETEESADNSEEVVFQKDTRRSIRRRQKK
RMGEAEKVGALTREKQTRSAAGRRTTSKEARGQQKRRQQNMILRCSGGES
SDAGGENEIKIGDQVEQQEEGDREHIEKKDEDKPGEGANNRRTNDEADDG
QNEGSNVTSIEMARETVVTGRSGSAFTAGATANNGRLPWRPGRGGKLSAL
PTLGLALAGEGRNDLQSLRNAHKADEKGYDNRRAHRAAGRGNKIERTQNE
T*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026971CND1/NCAPD3
IPR016024ARM-type_fold