prot_H-paniculata_contig28175.7690.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28175.7690.1
Unique Nameprot_H-paniculata_contig28175.7690.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length59
Homology
BLAST of mRNA_H-paniculata_contig28175.7690.1 vs. uniprot
Match: A0A151QP37_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QP37_CAJCA)

HSP 1 Score: 60.8 bits (146), Expect = 2.370e-9
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    4 VYTLRHKSETLWALKQFERNVAKANGLRIKRLRSDQGGEYTGKPFRQFFPENGIK 58
            VY L+ KSE     K+F+ NV K NGL IK LRSD+GGE+T K F+++  +NGI+
Sbjct:  495 VYFLKEKSEVFENFKKFKDNVEKENGLLIKALRSDRGGEFTSKEFQKYCEDNGIR 549          
BLAST of mRNA_H-paniculata_contig28175.7690.1 vs. uniprot
Match: A0A6G0JTE1_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0JTE1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.930e-9
Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    4 VYTLRHKSETLWALKQFERNVAKANGLRIKRLRSDQGGEYTGKPFRQFFPENGIK 58
            VY ++ K+E L   K+FE ++  A G +IKRLRSD GGEYTG+ F+++  + GI+
Sbjct:   79 VYFMKKKAEVLEKFKKFEADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIR 133          
BLAST of mRNA_H-paniculata_contig28175.7690.1 vs. uniprot
Match: A0A6A3LQ24_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3LQ24_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 8.010e-9
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    4 VYTLRHKSETLWALKQFERNVAKANGLRIKRLRSDQGGEYTGKPFRQFFPENGIK 58
            VY ++ K+E L   K F+ ++  A G +IKRLRSD GGEYTG+ F+++  + GI+
Sbjct:   55 VYFMKKKAEVLEKFKMFKADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIR 109          
BLAST of mRNA_H-paniculata_contig28175.7690.1 vs. uniprot
Match: A0A6A4CGC1_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CGC1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.040e-8
Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    4 VYTLRHKSETLWALKQFERNVAKANGLRIKRLRSDQGGEYTGKPFRQFFPENGIK 58
            VY ++ K+E L   K+FE ++  A G +IKRLRSD GGEYTG+ F+++  + GI+
Sbjct:   55 VYFMKKKAEVLEKFKKFEADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIR 109          
BLAST of mRNA_H-paniculata_contig28175.7690.1 vs. uniprot
Match: A0A6A3GPC9_9STRA (Integrase catalytic domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GPC9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.110e-8
Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    4 VYTLRHKSETLWALKQFERNVAKANGLRIKRLRSDQGGEYTGKPFRQFFPENGIK 58
            VY ++ K+E L   K+FE ++  A G +IKRLRSD GGEYTG+ F+++  + GI+
Sbjct:  130 VYFMKKKAEVLEKFKKFEADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIR 184          
BLAST of mRNA_H-paniculata_contig28175.7690.1 vs. uniprot
Match: A0A6A3H6E3_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3H6E3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.130e-8
Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    4 VYTLRHKSETLWALKQFERNVAKANGLRIKRLRSDQGGEYTGKPFRQFFPENGIK 58
            VY ++ K+E L   K+FE ++  A G +IKRLRSD GGEYTG+ F+++  + GI+
Sbjct:  188 VYFMKKKAEVLEKFKKFEADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIR 242          
BLAST of mRNA_H-paniculata_contig28175.7690.1 vs. uniprot
Match: A0A6A3G810_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3G810_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.210e-8
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    4 VYTLRHKSETLWALKQFERNVAKANGLRIKRLRSDQGGEYTGKPFRQFFPENGIK 58
            VY ++ K+E L   K F+ N+  A G +IKR+RSD GGEYTG+ F+++  + GI+
Sbjct:   75 VYFMKKKAEVLEKFKMFKANMENATGRKIKRIRSDNGGEYTGRLFKEYLSKEGIR 129          
BLAST of mRNA_H-paniculata_contig28175.7690.1 vs. uniprot
Match: A0A6A3GFE6_9STRA (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GFE6_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.930e-8
Identity = 26/55 (47.27%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    4 VYTLRHKSETLWALKQFERNVAKANGLRIKRLRSDQGGEYTGKPFRQFFPENGIK 58
            VY ++ KSE L   K F+ ++  A G +IKRLRSD GGEYTG+ F+++  + GI+
Sbjct:  211 VYFMKKKSEVLEKFKMFKADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIR 265          
BLAST of mRNA_H-paniculata_contig28175.7690.1 vs. uniprot
Match: A0A6A4AZQ8_9STRA (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4AZQ8_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.060e-8
Identity = 26/55 (47.27%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    4 VYTLRHKSETLWALKQFERNVAKANGLRIKRLRSDQGGEYTGKPFRQFFPENGIK 58
            VY ++ KSE L   K F+ ++  A G +IKRLRSD GGEYTG+ F+++  + GI+
Sbjct:   19 VYFMKKKSEVLEKFKMFKADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIR 73          
BLAST of mRNA_H-paniculata_contig28175.7690.1 vs. uniprot
Match: A0A6G0Q0M4_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q0M4_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.090e-8
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    4 VYTLRHKSETLWALKQFERNVAKANGLRIKRLRSDQGGEYTGKPFRQFFPENGIK 58
            VY ++ K+E L   K F+ ++  A G +IKRLRSD GGEYTG+ F+++  + GI+
Sbjct:  130 VYFMKKKAEVLEKFKMFKADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIR 184          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28175.7690.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151QP37_CAJCA2.370e-952.73Retrovirus-related Pol polyprotein from transposon... [more]
A0A6G0JTE1_9STRA4.930e-947.27Integrase catalytic domain-containing protein n=3 ... [more]
A0A6A3LQ24_9STRA8.010e-945.45Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A4CGC1_9STRA1.040e-847.27Integrase catalytic domain-containing protein n=3 ... [more]
A0A6A3GPC9_9STRA1.110e-847.27Integrase catalytic domain-containing protein n=7 ... [more]
A0A6A3H6E3_9STRA1.130e-847.27Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3G810_9STRA1.210e-845.45Integrase catalytic domain-containing protein (Fra... [more]
A0A6A3GFE6_9STRA1.930e-847.27Integrase catalytic domain-containing protein (Fra... [more]
A0A6A4AZQ8_9STRA2.060e-847.27Integrase catalytic domain-containing protein (Fra... [more]
A0A6G0Q0M4_9STRA2.090e-845.45Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 4..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28175contigH-paniculata_contig28175:801..977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28175.7690.1mRNA_H-paniculata_contig28175.7690.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28175 501..1233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28175.7690.1 ID=prot_H-paniculata_contig28175.7690.1|Name=mRNA_H-paniculata_contig28175.7690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bp
MRKVYTLRHKSETLWALKQFERNVAKANGLRIKRLRSDQGGEYTGKPFRQ
FFPENGIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf