prot_H-paniculata_contig28098.7672.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28098.7672.1
Unique Nameprot_H-paniculata_contig28098.7672.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length93
Homology
BLAST of mRNA_H-paniculata_contig28098.7672.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 99.4 bits (246), Expect = 2.810e-22
Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    1 NRAPTRPYNGGTPYEKWHGETPKLDHLRVFGCTAYVMFQR----KLDNKAWAGVFLGYDEDSASYRVYNPENKSVQLSRNVRFDE 81
            N  PT+   G TP+E WHG TP ++HL+VFGC  Y +       KLD K+  G+FLGY   S  YR+YNP  K + +SRNV+FDE
Sbjct:  596 NLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDE 680          
BLAST of mRNA_H-paniculata_contig28098.7672.1 vs. uniprot
Match: A0A151S498_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S498_CAJCA)

HSP 1 Score: 93.6 bits (231), Expect = 8.630e-21
Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    1 NRAPTRPYNGGTPYEKWHGETPKLDHLRVFGC---TAYVMFQRKLDNKAWAGVFLGYDEDSASYRVYNPENKSVQLSRNVRFDE 81
            N  PT+   G  P+E WHG  P ++HL+VFGC   +   M + KLD K+  GVFLGY+ +S  YR+YNP +K + +SRNV+FDE
Sbjct:   16 NLLPTKALKGKIPFEAWHGRKPSMEHLKVFGCVLCSCSRMKRDKLDQKSKVGVFLGYNNNSKGYRIYNPTSKKILVSRNVKFDE 99          
BLAST of mRNA_H-paniculata_contig28098.7672.1 vs. uniprot
Match: Q7G6A8_ORYSJ (Os10g0130700 protein n=3 Tax=Oryza sativa TaxID=4530 RepID=Q7G6A8_ORYSJ)

HSP 1 Score: 92.4 bits (228), Expect = 7.630e-20
Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    1 NRAPTRPYNGGTPYEKWHGETPKLDHLRVFGCTAYVMFQ----RKLDNKAWAGVFLGYDEDSASYRVYNPENKSVQLSRNVRFDE 81
            NR+PT+  NG TP+E WHG  P ++HLRVFGC  YV       RKLD++    VF+GY++ S +YR+Y+P  + V +SR+V FDE
Sbjct:  717 NRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVARRVCVSRDVVFDE 801          
BLAST of mRNA_H-paniculata_contig28098.7672.1 vs. uniprot
Match: Q7XTU6_ORYSJ (OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XTU6_ORYSJ)

HSP 1 Score: 92.0 bits (227), Expect = 1.040e-19
Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    1 NRAPTRPYNGGTPYEKWHGETPKLDHLRVFGCTAYVMFQ----RKLDNKAWAGVFLGYDEDSASYRVYNPENKSVQLSRNVRFDE 81
            NR+PT+  +G TPYE WHG  P ++HLRVFGC  YV       RKLD++    VF+GY++ S +YR+Y+P  + V +SR+V FDE
Sbjct:  717 NRSPTKALDGVTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVAQRVCVSRDVVFDE 801          
BLAST of mRNA_H-paniculata_contig28098.7672.1 vs. uniprot
Match: A0A6G1CEI4_9ORYZ (Uncharacterized protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1CEI4_9ORYZ)

HSP 1 Score: 87.0 bits (214), Expect = 1.220e-19
Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    1 NRAPTRPYNGGTPYEKWHGETPKLDHLRVFGCTAYVMFQR----KLDNKAWAGVFLGYDEDSASYRVYNPENKSVQLSRNVRFDEEDF 84
            NR+PT+  +G  PYE WHG  P ++HLRVFGC  +V   R    KLD++    VF+GY++ + +Y++Y+P  + V +S NV FDE  F
Sbjct:   38 NRSPTKSLDGVMPYEAWHGRRPMVEHLRVFGCVGHVKTARPNLRKLDDRGTRMVFIGYEDGTKAYQMYDPVARRVYVSHNVVFDETAF 125          
BLAST of mRNA_H-paniculata_contig28098.7672.1 vs. uniprot
Match: Q60DG5_ORYSJ (Putative polyprotein n=3 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q60DG5_ORYSJ)

HSP 1 Score: 91.3 bits (225), Expect = 1.920e-19
Identity = 40/85 (47.06%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    1 NRAPTRPYNGGTPYEKWHGETPKLDHLRVFGCTAYVMFQ----RKLDNKAWAGVFLGYDEDSASYRVYNPENKSVQLSRNVRFDE 81
            NR+PT+  +G TPYE WHG  P ++HL+VFGC  YV       RKLD++    VF+GY++ S +YR+Y+P ++   +SR+V FDE
Sbjct:  380 NRSPTKSLDGVTPYEAWHGRRPSVEHLKVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVSRRFYVSRDVVFDE 464          
BLAST of mRNA_H-paniculata_contig28098.7672.1 vs. uniprot
Match: A0A177U095_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U095_9BASI)

HSP 1 Score: 90.9 bits (224), Expect = 2.630e-19
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    1 NRAPTRPYNGGTPYEKWHGETPKLDHLRVFGCTAYVMFQRK-----LDNKAWAGVFLGYDEDSASYRVYNPENKSVQLSRNVRFDEE 82
            N  P+RP  G TP+E W+G  P++DHLR+FGC A+VM   K     L  +A  GVF+GYD+ S  YRV+ P+  ++ +SRNV F E+
Sbjct:  356 NHRPSRPLGGKTPFELWYGTPPRIDHLRIFGCLAFVMLPDKAREHSLSARARVGVFIGYDKYSKGYRVHFPDTGALAISRNVDFHED 442          
BLAST of mRNA_H-paniculata_contig28098.7672.1 vs. uniprot
Match: A0A540MM95_MALBA (Integrase catalytic domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MM95_MALBA)

HSP 1 Score: 87.8 bits (216), Expect = 2.790e-18
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    1 NRAPTRPYNGGTPYEKWHGETPKLDHLRVFGCTAYVMF----QRKLDNKAWAGVFLGYDEDSASYRVYNPENKSVQLSRNVRFDEED 83
            NR+PTR   G TP E W G  P + HLRVFG  A+V      + KLD+K+   +F+GYD +S  Y++YNP N+ + +SR+V FDEE+
Sbjct:   76 NRSPTRSVWGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDERRAKLDDKSEKFIFIGYDSNSKGYKLYNPNNRKMVISRDVTFDEEE 162          
BLAST of mRNA_H-paniculata_contig28098.7672.1 vs. uniprot
Match: A0A2V8RS33_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8RS33_9BACT)

HSP 1 Score: 87.8 bits (216), Expect = 3.140e-18
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    1 NRAPTRPYNGGTPYEKWHGETPKLDHLRVFGCTAYVMF-----QRKLDNKAWAGVFLGYDEDSASYRVYNPENKSVQLSRNVRFDEEDFVT 86
            NR P+      TPYE W+G  P LDHLR+FGCTA+V       ++KLD+K+    F+GY  D   Y+VY+P N     +R++ FDEE F T
Sbjct:  573 NRIPSASIGNRTPYELWYGRKPSLDHLRIFGCTAWVHVPKESGRQKLDDKSKKMCFVGYISDKGIYKVYDPTNGRFSTARDIIFDEEKFFT 663          
BLAST of mRNA_H-paniculata_contig28098.7672.1 vs. uniprot
Match: A0A6A3C4D2_HIBSY (FAD-binding Berberine family protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C4D2_HIBSY)

HSP 1 Score: 87.8 bits (216), Expect = 3.200e-18
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 0
Query:    1 NRAPTRPYNGGTPYEKWHGETPKLDHLRVFGCTAYV----MFQRKLDNKAWAGVFLGYDEDSASYRVYNPENKSVQLSRNVRFDEEDF 84
            NR PT+     TP E W G+ P + HL++FGC AY       ++KLD++    +F+GYDE S +YR+YNP  K + +SR+V FDE D+
Sbjct:  484 NRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 571          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28098.7672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151T355_CAJCA2.810e-2249.41Retrovirus-related Pol polyprotein from transposon... [more]
A0A151S498_CAJCA8.630e-2148.81Retrovirus-related Pol polyprotein from transposon... [more]
Q7G6A8_ORYSJ7.630e-2049.41Os10g0130700 protein n=3 Tax=Oryza sativa TaxID=45... [more]
Q7XTU6_ORYSJ1.040e-1949.41OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subs... [more]
A0A6G1CEI4_9ORYZ1.220e-1944.32Uncharacterized protein n=1 Tax=Oryza meyeriana va... [more]
Q60DG5_ORYSJ1.920e-1947.06Putative polyprotein n=3 Tax=Oryza sativa subsp. j... [more]
A0A177U095_9BASI2.630e-1947.13Integrase catalytic domain-containing protein n=2 ... [more]
A0A540MM95_MALBA2.790e-1847.13Integrase catalytic domain-containing protein n=1 ... [more]
A0A2V8RS33_9BACT3.140e-1845.05Uncharacterized protein (Fragment) n=1 Tax=Acidoba... [more]
A0A6A3C4D2_HIBSY3.200e-1844.32FAD-binding Berberine family protein n=1 Tax=Hibis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..85
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 1..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28098contigH-paniculata_contig28098:510..800 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28098.7672.1mRNA_H-paniculata_contig28098.7672.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28098 510..800 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28098.7672.1 ID=prot_H-paniculata_contig28098.7672.1|Name=mRNA_H-paniculata_contig28098.7672.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp
NRAPTRPYNGGTPYEKWHGETPKLDHLRVFGCTAYVMFQRKLDNKAWAGV
FLGYDEDSASYRVYNPENKSVQLSRNVRFDEEDFVTGHRVQQE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like