prot_H-paniculata_contig27886.7616.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27886.7616.1
Unique Nameprot_H-paniculata_contig27886.7616.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length231
Homology
BLAST of mRNA_H-paniculata_contig27886.7616.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 3.850e-66
Identity = 116/232 (50.00%), Postives = 152/232 (65.52%), Query Frame = 0
Query:    1 MPLDPQAQEIFTMVTAKRVYTPTRDPQGVLNATSYFQRTMGDVLAGLLGKVCEVWVDDIGIWAGRWQELMRRLRVVLERLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQGLASMRRPNTPGELMPFLQASNWMRTSVPELAVVVEPLREMLETFL-NNTRRTRRAADKIAITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVT 231
            MPL P+AQEIFTM+    +Y+P R PQGVLNATSY+Q TM  +L  L    C VWVDDI  W    ++L+  L ++L R +  G++ AAHK   +   ++WCGK+YS   + HD +R+ GLA++RRP T GELM FLQA NW+RTS+P ++ +V PLRE LE  +  N  RT+R A   AI    WT     +WE A + V+ AV LYHP A ++VL+FPDASD  WGS VT
Sbjct:  760 MPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVT 988          
BLAST of mRNA_H-paniculata_contig27886.7616.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 3.480e-63
Identity = 119/231 (51.52%), Postives = 148/231 (64.07%), Query Frame = 0
Query:    2 PLDPQAQEIFTMVTAKRVYTPTRDPQGVLNATSYFQRTMGDVLAGLLGKVCEVWVDDIGIWAGRWQELMRRLRVVLERLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQGLASMRRPNTPGELMPFLQASNWMRTSVPELAVVVEPLREMLETFLNNTR-RTRRAADKIAITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVT 231
            PL P+AQEIFT+ T   +YTP R PQG+LNATSYFQ T+  +L GL    C VWVDD+  W     +L+  L ++L+RL+  G+Y AAHK   F   + WCGK+YS   V HDPER+ GLA+MRRP T GELM FLQA NW+RTS+P +A VV PLR  LE  L   + RT+R A+  AI     T     AW  A + V+ AV L HP    +VL+FPDASD  WGS +T
Sbjct:  859 PLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLT 1086          
BLAST of mRNA_H-paniculata_contig27886.7616.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 1.480e-57
Identity = 113/232 (48.71%), Postives = 148/232 (63.79%), Query Frame = 0
Query:    1 MPLDPQAQEIFTMVTAKRVYTPTRDPQGVLNATSYFQRTMGDVLAGLLGKVCEVWVDDIGIWAGRWQELMRRLRVVLERLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQGLASMRRPNTPGELMPFLQASNWMRTSVPELAVVVEPLREMLETFLNNT-RRTRRAADKIAITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVT 231
            MPL   A+EIF++ T + ++ PTR PQ VLNAT YFQ  M ++L GL    C VWVDD   W     +L+  L  +L RLQ  GI+AAAHK   F  ++RWCGK+YSG  V+ DPER+QGL  MRRP T G+LM FLQA  W+RTS+  LA V+EP+R +LE  + +  R+T+  A   AI    WT     AW +A + V+ AV L HP+   +VL+FPDAS+  WGS +T
Sbjct:  511 MPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGLN---CAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPKDGFAVLMFPDASEEHWGSFLT 739          
BLAST of mRNA_H-paniculata_contig27886.7616.1 vs. uniprot
Match: A0A6A3ME06_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3ME06_9STRA)

HSP 1 Score: 164 bits (416), Expect = 6.100e-43
Identity = 90/233 (38.63%), Postives = 133/233 (57.08%), Query Frame = 0
Query:    1 MPLDPQAQEIFTMVTAKRVYTPTRDPQGVLNATSYFQRTMGDVLAGLLGKVCEVWVDDIGIWAGRWQELMRRLRVVLERLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQGLASMRRPNTPGELMPFLQASNWMRTSVPELAVVVEPLREMLETFLN--NTRRTRRAADKIAITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVT 231
            +PL P +QE+F+ VT + +YTPTR P G  +A ++ Q  + ++   LLG+    W+DDI  +A   +EL+  L  VLER +  G+   A K   F  E++WCG+I S   V H PER+QGL  M+ P T GEL  F+ A+NWMR S+PE + +   L E LE       +R+ ++ A K+ +    W +  A+++E     +   VPL HPR    V ++ DAS  FWG+ VT
Sbjct:  440 LPLHPDSQELFSFVTHRGIYTPTRVPMGATDAVAFCQGVVEEIFGDLLGQGLLCWLDDIIGYAETEEELLALLEKVLERREKFGLKLHAKKYLFFATEVKWCGRIISAEGVKHCPERIQGLVDMQPPRTAGELQQFVCAANWMRQSIPEYSRLSAALYEALERAAQVAGSRKQKKMA-KVRLDEVGWHDTEASSFEAVRAALLRMVPLAHPRPTAEVCLYTDASQDFWGAVVT 671          
BLAST of mRNA_H-paniculata_contig27886.7616.1 vs. uniprot
Match: A0A6G0R5C5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0R5C5_9STRA)

HSP 1 Score: 163 bits (412), Expect = 2.140e-42
Identity = 87/232 (37.50%), Postives = 129/232 (55.60%), Query Frame = 0
Query:    1 MPLDPQAQEIFTMVTAKRVYTPTRDPQGVLNATSYFQRTMGDVLAGLLGKVCEVWVDDIGIWAGRWQELMRRLRVVLERLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQGLASMRRPNTPGELMPFLQASNWMRTSVPELAVVVEPLREMLETFLNNT-RRTRRAADKIAITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVT 231
            +PL P +QE+++ VT +R+YTPTR P G  +A +Y Q  + ++   LLG     W+DDI  +A   + L+  L  VL R +  G+   A K   F  +++WCG+I S   V+H PERVQGL  M+RP T GEL  F+ A+NWMR S+PE + +  PL E L+          +    K+ +   +W +   A++E     + + VPL HP     V ++ DAS  FWG+ VT
Sbjct:  781 LPLHPDSQELYSFVTHRRIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGHCMLAWLDDILGFAKTEEALLAVLDQVLARCEQYGLKLHAKKCTFFSTKVKWCGRIISADGVTHCPERVQGLVKMQRPRTTGELQQFVCAANWMRQSLPEYSRISAPLYEALDRAAQVVGSHKKNQLSKVGLEDVNWGDAEVASFEAVRTALLKMVPLAHPNPTMDVCLYIDASQDFWGAAVT 1012          
BLAST of mRNA_H-paniculata_contig27886.7616.1 vs. uniprot
Match: A0A6A3I3R6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3I3R6_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.710e-41
Identity = 88/233 (37.77%), Postives = 130/233 (55.79%), Query Frame = 0
Query:    1 MPLDPQAQEIFTMVTAKRVYTPTRDPQGVLNATSYFQRTMGDVLAGLLGKVCEVWVDDIGIWAGRWQELMRRLRVVLERLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQGLASMRRPNTPGELMPFLQASNWMRTSVPELAVVVEPLREMLETFLN--NTRRTRRAADKIAITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVT 231
            +PL P +QE+F+ VT + +YTPTR P G  +A +Y Q  + ++   LLG+    W+DDI  +A   +EL+  L  V  R +  G+   A K   F  E++WCG+I S   V H PER+QGL  M+ P T GEL  F+ A+NWMR S+PE + +   L E LE       +R+  + A K+ +    W +  A+++E     +   VPL HPR    V ++ DAS  FWG+ +T
Sbjct:  152 LPLHPDSQELFSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGQGLLCWLDDILGYAETEEELLALLEKVSVRCEKFGLKLHAKKCLFFATEVKWCGRIISAEGVKHCPERIQGLVDMQPPRTAGELQQFVCAANWMRQSIPEYSRLSAALYEALERAAQVAGSRKQNKLA-KVRLDEVGWHDTEASSFEAVRAALLRMVPLAHPRPTAEVCLYTDASQDFWGAVLT 383          
BLAST of mRNA_H-paniculata_contig27886.7616.1 vs. uniprot
Match: A0A6A3GVC4_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3GVC4_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.220e-40
Identity = 85/233 (36.48%), Postives = 125/233 (53.65%), Query Frame = 0
Query:    1 MPLDPQAQEIFTMVTAKRVYTPTRDPQGVLNATSYFQRTMGDVLAGLLGKVCEVWVDDIGIWAGRWQELMRRLRVVLERLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQGLASMRRPNTPGELMPFLQASNWMRTSVPELAVVVEPLREMLETF--LNNTRRTRRAADKIAITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVT 231
            +PL P +QE+++ VT + +YTPTR P G  +A +Y Q  + ++   L+G     W+DDI  +A     L+  L  VL R +  G+   A K + F  E++WCG++ S   V H PERVQGL  M  P T G+L  FL A NWMR S+PE   +   L + LE    ++ +R+    A KI +    W +   A++E     +   VPL HP     V ++ DAS  FWG+ V+
Sbjct:  116 LPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCQGVVDEIFGDLIGDGILAWLDDILGYAENESALLELLDKVLSRCEAYGLKLHAKKCQFFATEVKWCGRVISADGVKHCPERVQGLVDMSPPRTAGDLQQFLCAVNWMRQSIPEYTRITANLYDALERAAKISGSRKKNMLA-KIRLDDVGWGDTEIASFENICGALLRMVPLAHPSPTAEVALYTDASQDFWGAMVS 347          
BLAST of mRNA_H-paniculata_contig27886.7616.1 vs. uniprot
Match: A0A0G4J790_PLABS (Reverse transcriptase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J790_PLABS)

HSP 1 Score: 157 bits (396), Expect = 2.230e-40
Identity = 86/232 (37.07%), Postives = 131/232 (56.47%), Query Frame = 0
Query:    1 MPLDPQAQEIFTMVTAKRVYTPTRDPQGVLNATSYFQRTMGDVLAGLLGKVCEVWVDDIGIWAGRWQELMRRLRVVLERLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQGLASMRRPNTPGELMPFLQASNWMRTSVPELAVVVEPLREMLETFLNNTRRTRRAA-DKIAITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVT 231
            MP+  + QEIF+ +T   VYTPTR  QG  N+   FQ  +G +   +   +  +W+DD+  +A     L+ +L  VLER + R +     K  LF RE++WCG+IYS   + HDPER++ L SM RPNT  EL  F+ A+NWMRTSVP  A ++ PL+E+ +      +R + ++   I +    WT+  + A+E     + + V L +P++D    +F DASD  W   +T
Sbjct:  408 MPIAKECQEIFSFMTDDGVYTPTRSIQGATNSALQFQARIGKIFDDMKDHLL-IWIDDLLGFAKTEDILLHQLARVLERARERNLKFNPDKCVLFARELKWCGRIYSRDGIRHDPERIEALTSMPRPNTFKELQQFIWAANWMRTSVPGYAYIIAPLQELTDKANEEMKRIQSSSPSSIRLHDLGWTDRHSKAFEDIRFALIQHVQLAYPKSDHQTCLFTDASDLAWAPVIT 638          
BLAST of mRNA_H-paniculata_contig27886.7616.1 vs. uniprot
Match: A0A6A3Z230_9STRA (RNA-directed DNA polymerase n=12 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z230_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.010e-39
Identity = 86/232 (37.07%), Postives = 127/232 (54.74%), Query Frame = 0
Query:    1 MPLDPQAQEIFTMVTAKRVYTPTRDPQGVLNATSYFQRTMGDVLAGLLGKVCEVWVDDIGIWAGRWQELMRRLRVVLERLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQGLASMRRPNTPGELMPFLQASNWMRTSVPELAVVVEPLREMLETFLNNT-RRTRRAADKIAITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVT 231
            +PL P +QE+++ VT + +YTPTR P GV +A +Y Q  + ++   LLG     W+DD  I     + L+  L  VL R +  G+   A K   F  +++WCG+I S   V+H PERVQGL  M+RP T GEL  F+ A+NWMR S+PE + +   L E L+        R +    K+ +   +W +   A++E     + + VPL HP     V ++ DAS  FWG+ VT
Sbjct:  491 LPLHPDSQELYSFVTHRGIYTPTRVPMGVTDAVAYCQGVVEEIFGDLLGHCMLAWLDDNIITE---EALLDVLDQVLARCEQYGLKLHAKKCTFFSTKVKWCGRIISADGVTHCPERVQGLVEMQRPRTAGELQQFVCAANWMRQSLPEYSRISAALYEALDRVAQVVGSRKKNQLSKVRLEDVNWGDAEVASFEAVRTALLKMVPLAHPNPTMDVCLYTDASQDFWGAAVT 719          
BLAST of mRNA_H-paniculata_contig27886.7616.1 vs. uniprot
Match: A0A6A3JYA3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JYA3_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.450e-39
Identity = 78/232 (33.62%), Postives = 128/232 (55.17%), Query Frame = 0
Query:    1 MPLDPQAQEIFTMVTAKRVYTPTRDPQGVLNATSYFQRTMGDVLAGLLGKVCEVWVDDIGIWAGRWQELMRRLRVVLERLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQGLASMRRPNTPGELMPFLQASNWMRTSVPELAVVVEPLREMLETFLNNT-RRTRRAADKIAITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVT 231
            +PLDP++QE++T++T + +YTP RDP G  ++ ++ Q+ + ++    + +    W+DD+  +A    EL      V+++    G+     K   F + ++WCG++ S A V+H P+R+QGL  M  P T  +L   L A+NWMRTS+PE A +  PL + LE  +  T  R +    K  +    W +E  A+     + ++   PL HPRAD  V +F DAS  +WG+  T
Sbjct:  486 LPLDPESQELYTLMTHRGMYTPLRDPMGATDSVAFCQQAVEEIFRDEINRGVLAWLDDLLGYAATEAELCDLFDRVMQKCADYGLKLHPGKCVFFTKSIKWCGRVISAAGVTHCPDRIQGLVDMAPPITAADLQQLLCAANWMRTSIPEYANITGPLYKTLEVAMKITGSRKKSKLQKTKLDECQWGQEETASLNNLKDALARITPLAHPRADWDVCLFTDASAEYWGAVAT 717          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27886.7616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE3.850e-6650.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE3.480e-6351.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE1.480e-5748.71CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6A3ME06_9STRA6.100e-4338.63Uncharacterized protein n=3 Tax=Phytophthora rubi ... [more]
A0A6G0R5C5_9STRA2.140e-4237.50Uncharacterized protein n=4 Tax=Phytophthora fraga... [more]
A0A6A3I3R6_9STRA1.710e-4137.77Uncharacterized protein n=3 Tax=Phytophthora rubi ... [more]
A0A6A3GVC4_9STRA1.220e-4036.48Reverse transcriptase domain-containing protein n=... [more]
A0A0G4J790_PLABS2.230e-4037.07Reverse transcriptase domain-containing protein n=... [more]
A0A6A3Z230_9STRA1.010e-3937.07RNA-directed DNA polymerase n=12 Tax=Phytophthora ... [more]
A0A6A3JYA3_9STRA2.450e-3933.62Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 32..104
e-value: 9.3E-18
score: 66.3
NoneNo IPR availableGENE3D3.30.70.270coord: 122..206
e-value: 1.2E-9
score: 40.2
NoneNo IPR availableGENE3D3.10.10.10coord: 2..31
e-value: 9.3E-18
score: 66.3
NoneNo IPR availableGENE3D3.10.20.370coord: 207..229
e-value: 1.2E-9
score: 40.2
NoneNo IPR availablePANTHERPTHR33064:SF25coord: 1..165
NoneNo IPR availablePANTHERPTHR33064FAMILY NOT NAMEDcoord: 1..165
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..229
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..106
score: 9.921

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27886contigH-paniculata_contig27886:2555..3247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27886.7616.1mRNA_H-paniculata_contig27886.7616.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27886 804..3247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27886.7616.1 ID=prot_H-paniculata_contig27886.7616.1|Name=mRNA_H-paniculata_contig27886.7616.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=231bp
MPLDPQAQEIFTMVTAKRVYTPTRDPQGVLNATSYFQRTMGDVLAGLLGK
VCEVWVDDIGIWAGRWQELMRRLRVVLERLQVRGIYAAAHKAKLFRREMR
WCGKIYSGATVSHDPERVQGLASMRRPNTPGELMPFLQASNWMRTSVPEL
AVVVEPLREMLETFLNNTRRTRRAADKIAITRGDWTEERAAAWETATERV
SEAVPLYHPRADRSVLIFPDASDSFWGSCVT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom