prot_H-paniculata_contig27685.7583.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27685.7583.1
Unique Nameprot_H-paniculata_contig27685.7583.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
[Close]
BLAST of mRNA_H-paniculata_contig27685.7583.1 vs. uniprot
Match: A0A6H5LBI9_9PHAE (PLCXc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBI9_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.220e-40
Identity = 71/114 (62.28%), Postives = 87/114 (76.32%), Query Frame = 0 
Query:    1 RIHTAWY-VKARDPLFWPGVKQEWVGAETVPALYKMAEDVLVQKKAVLWSLPLVLPAGVPRPVPHIPAQLDNWTMVGSVWQENASIVAADFIEETQIVRNCVGANLLTAARTSA 113
            R+   W  V+AR+P FWPGV+Q W GAE+V +L+ +AE  L +K  +LWSLPLVLPAGVPRPVPHIP  LD+W   G VWQ++ASIV  DF+EETQ+VRNCVGA L+  AR SA
Sbjct:  401 RVGILWNAVEAREPHFWPGVRQAWTGAESVRSLHDLAEAELAEKNGLLWSLPLVLPAGVPRPVPHIPEHLDDWLSAGGVWQDHASIVTCDFVEETQLVRNCVGACLMKMARASA 514
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27685.7583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBI9_9PHAE1.220e-4062.28PLCXc domain-containing protein n=2 Tax=Ectocarpus... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27685contigH-paniculata_contig27685:1657..2795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27685.7583.1mRNA_H-paniculata_contig27685.7583.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27685 1657..2795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27685.7583.1 ID=prot_H-paniculata_contig27685.7583.1|Name=mRNA_H-paniculata_contig27685.7583.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
RIHTAWYVKARDPLFWPGVKQEWVGAETVPALYKMAEDVLVQKKAVLWSL
PLVLPAGVPRPVPHIPAQLDNWTMVGSVWQENASIVAADFIEETQIVRNC
VGANLLTAARTSAAL*
back to top