prot_H-paniculata_contig27411.7502.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27411.7502.1
Unique Nameprot_H-paniculata_contig27411.7502.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
BLAST of mRNA_H-paniculata_contig27411.7502.1 vs. uniprot
Match: A0A6H5JQJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ4_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.740e-20
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 0
Query:   13 EHDNDILLLEGRCNDVSLSTRKAAMTALSSLLVARPEDEDLQQAWVRAMLPLAGDPEQTCQ 73
            EH+ D  LL+ RCND+SLSTRKAAM ALSSLL+ RP DE LQ+AWV ++LPLAGDPEQTCQ
Sbjct:  546 EHEADFELLQERCNDISLSTRKAAMGALSSLLMLRPSDETLQKAWVSSVLPLAGDPEQTCQ 606          
BLAST of mRNA_H-paniculata_contig27411.7502.1 vs. uniprot
Match: D7FP86_ECTSI (Cnd1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP86_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 2.460e-20
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 0
Query:   13 EHDNDILLLEGRCNDVSLSTRKAAMTALSSLLVARPEDEDLQQAWVRAMLPLAGDPEQTCQ 73
            EH+ D  LL+ RCND+SLSTRKAAM ALSSLL+ RP DE LQ+AWV ++LPLAGDPEQTCQ
Sbjct:  682 EHEADFELLQERCNDMSLSTRKAAMGALSSLLMLRPSDESLQKAWVSSVLPLAGDPEQTCQ 742          
BLAST of mRNA_H-paniculata_contig27411.7502.1 vs. uniprot
Match: A0A8C1HFJ5_CYPCA (Condensin-2 complex subunit D3 n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1HFJ5_CYPCA)

HSP 1 Score: 53.5 bits (127), Expect = 1.640e-6
Identity = 28/72 (38.89%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    8 RDSAVEHD------NDILLLEGRCNDVSLSTRKAAMTALSSLLVARPEDEDLQQAWVRAMLPLAGDPEQTCQ 73
            R SA+EH        ++ +L  RC D ++S +K AM  L  LL A PE+ ++Q+AW+R +LP   D E + Q
Sbjct:  531 RKSALEHRVISCSAENLSILSDRCRDPAVSVKKKAMQCLMDLLAALPENREVQEAWLRGVLPAVMDSESSVQ 602          
BLAST of mRNA_H-paniculata_contig27411.7502.1 vs. uniprot
Match: A0A8C2CT10_CYPCA (Condensin-2 complex subunit D3 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2CT10_CYPCA)

HSP 1 Score: 51.2 bits (121), Expect = 1.070e-5
Identity = 23/57 (40.35%), Postives = 36/57 (63.16%), Query Frame = 0
Query:   17 DILLLEGRCNDVSLSTRKAAMTALSSLLVARPEDEDLQQAWVRAMLPLAGDPEQTCQ 73
            ++ +L  RC D ++S +K AM  L  LL A PE+ ++Q+AW+R +LP   D E + Q
Sbjct:  519 NLSILSDRCRDPAVSVKKKAMQCLMDLLAALPENREVQEAWLRGVLPAVMDSESSVQ 575          
BLAST of mRNA_H-paniculata_contig27411.7502.1 vs. uniprot
Match: A0A8C2H3Q3_CYPCA (Condensin-2 complex subunit D3 n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2H3Q3_CYPCA)

HSP 1 Score: 51.2 bits (121), Expect = 1.070e-5
Identity = 23/57 (40.35%), Postives = 36/57 (63.16%), Query Frame = 0
Query:   17 DILLLEGRCNDVSLSTRKAAMTALSSLLVARPEDEDLQQAWVRAMLPLAGDPEQTCQ 73
            ++ +L  RC D ++S +K AM  L  LL A PE+ ++Q+AW+R +LP   D E + Q
Sbjct:  553 NLSILSDRCRDPAVSVKKKAMQCLMDLLAALPENREVQEAWLRGVLPAVMDSESSVQ 609          
BLAST of mRNA_H-paniculata_contig27411.7502.1 vs. uniprot
Match: A0A672MFI8_SINGR (Condensin-2 complex subunit D3 n=9 Tax=Cyprininae TaxID=2743694 RepID=A0A672MFI8_SINGR)

HSP 1 Score: 50.8 bits (120), Expect = 1.460e-5
Identity = 23/57 (40.35%), Postives = 36/57 (63.16%), Query Frame = 0
Query:   17 DILLLEGRCNDVSLSTRKAAMTALSSLLVARPEDEDLQQAWVRAMLPLAGDPEQTCQ 73
            ++ +L  RC D ++S +K AM  L  LL A PE+ ++Q+AW+R +LP   D E + Q
Sbjct:  497 NLSILSDRCRDPAVSVKKKAMQCLIDLLAALPENREVQEAWLRGVLPAVMDSESSVQ 553          
BLAST of mRNA_H-paniculata_contig27411.7502.1 vs. uniprot
Match: A0A672MJP4_SINGR (Condensin-2 complex subunit D3 n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672MJP4_SINGR)

HSP 1 Score: 50.8 bits (120), Expect = 1.460e-5
Identity = 23/57 (40.35%), Postives = 36/57 (63.16%), Query Frame = 0
Query:   17 DILLLEGRCNDVSLSTRKAAMTALSSLLVARPEDEDLQQAWVRAMLPLAGDPEQTCQ 73
            ++ +L  RC D ++S +K AM  L  LL A PE+ ++Q+AW+R +LP   D E + Q
Sbjct:  497 NLSILSDRCRDPAVSVKKKAMQCLIDLLAALPENREVQEAWLRGVLPAVMDSESSVQ 553          
BLAST of mRNA_H-paniculata_contig27411.7502.1 vs. uniprot
Match: A0A672MFC5_SINGR (Condensin-2 complex subunit D3 n=4 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672MFC5_SINGR)

HSP 1 Score: 50.8 bits (120), Expect = 1.460e-5
Identity = 23/57 (40.35%), Postives = 36/57 (63.16%), Query Frame = 0
Query:   17 DILLLEGRCNDVSLSTRKAAMTALSSLLVARPEDEDLQQAWVRAMLPLAGDPEQTCQ 73
            ++ +L  RC D ++S +K AM  L  LL A PE+ ++Q+AW+R +LP   D E + Q
Sbjct:  566 NLSILSDRCRDPAVSVKKKAMQCLIDLLAALPENREVQEAWLRGVLPAVMDSESSVQ 622          
BLAST of mRNA_H-paniculata_contig27411.7502.1 vs. uniprot
Match: A0A8C5MU16_9ANUR (Condensin-2 complex subunit D3 n=5 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MU16_9ANUR)

HSP 1 Score: 49.7 bits (117), Expect = 3.750e-5
Identity = 22/57 (38.60%), Postives = 38/57 (66.67%), Query Frame = 0
Query:   17 DILLLEGRCNDVSLSTRKAAMTALSSLLVARPEDEDLQQAWVRAMLPLAGDPEQTCQ 73
            D+  L  RC D ++S RK A+++L+ LL A+P++  +Q+AW+  ++P+  D E T Q
Sbjct:  552 DLNTLPDRCRDPAVSVRKQALSSLTELLQAQPQNVQIQKAWLTGLVPVVLDTESTVQ 608          
BLAST of mRNA_H-paniculata_contig27411.7502.1 vs. uniprot
Match: A0A553MTJ8_9TELE (Condensin-2 complex subunit D3 n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553MTJ8_9TELE)

HSP 1 Score: 48.5 bits (114), Expect = 9.590e-5
Identity = 22/58 (37.93%), Postives = 36/58 (62.07%), Query Frame = 0
Query:   16 NDILLLEGRCNDVSLSTRKAAMTALSSLLVARPEDEDLQQAWVRAMLPLAGDPEQTCQ 73
            +++ +L  RC D ++S +K A   L  LL A PE+ ++Q+AW+R +LP   D E + Q
Sbjct:  574 DNLSILSERCRDSAVSVKKKAFQCLMELLAALPENTEVQEAWLRGLLPALLDSESSVQ 631          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27411.7502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JQJ4_9PHAE1.740e-2073.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP86_ECTSI2.460e-2073.77Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A8C1HFJ5_CYPCA1.640e-638.89Condensin-2 complex subunit D3 n=2 Tax=Cyprinus ca... [more]
A0A8C2CT10_CYPCA1.070e-540.35Condensin-2 complex subunit D3 n=1 Tax=Cyprinus ca... [more]
A0A8C2H3Q3_CYPCA1.070e-540.35Condensin-2 complex subunit D3 n=2 Tax=Cyprinus ca... [more]
A0A672MFI8_SINGR1.460e-540.35Condensin-2 complex subunit D3 n=9 Tax=Cyprininae ... [more]
A0A672MJP4_SINGR1.460e-540.35Condensin-2 complex subunit D3 n=1 Tax=Sinocycloch... [more]
A0A672MFC5_SINGR1.460e-540.35Condensin-2 complex subunit D3 n=4 Tax=Sinocycloch... [more]
A0A8C5MU16_9ANUR3.750e-538.60Condensin-2 complex subunit D3 n=5 Tax=Leptobrachi... [more]
A0A553MTJ8_9TELE9.590e-537.93Condensin-2 complex subunit D3 n=1 Tax=Danionella ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14222:SF1CONDENSIN-2 COMPLEX SUBUNIT D3coord: 16..73
IPR026971Condensin subunit 1/Condensin-2 complex subunit D3PANTHERPTHR14222CONDENSINcoord: 16..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27411contigH-paniculata_contig27411:780..2804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27411.7502.1mRNA_H-paniculata_contig27411.7502.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27411 780..2804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27411.7502.1 ID=prot_H-paniculata_contig27411.7502.1|Name=mRNA_H-paniculata_contig27411.7502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
DGGALGWRDSAVEHDNDILLLEGRCNDVSLSTRKAAMTALSSLLVARPED
EDLQQAWVRAMLPLAGDPEQTCQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026971CND1/NCAPD3