prot_H-paniculata_contig27356.7487.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27356.7487.1
Unique Nameprot_H-paniculata_contig27356.7487.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
BLAST of mRNA_H-paniculata_contig27356.7487.1 vs. uniprot
Match: A0A6A4C9T3_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4C9T3_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.720e-12
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQGYWQMPLDPQEQEIFTMVTANGVYTPTRVPQGAK 48
            + GA+VF +LD  +GYWQ+PL P  QE FT +T  G+YTPTRVP GAK
Sbjct:  453 LEGATVFFSLDWFRGYWQLPLHPDSQEFFTFITHRGMYTPTRVPMGAK 500          
BLAST of mRNA_H-paniculata_contig27356.7487.1 vs. uniprot
Match: A0A6A3DJI3_9STRA (Reverse transcriptase domain-containing protein n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3DJI3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.120e-11
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQGYWQMPLDPQEQEIFTMVTANGVYTPTRVPQGAK 48
            + GA+VF +LD  +GYWQ+PL P  QE F  +T  G+YTPTRVP GAK
Sbjct:  268 LEGATVFFSLDWFRGYWQLPLHPDSQEFFIFITHRGMYTPTRVPMGAK 315          
BLAST of mRNA_H-paniculata_contig27356.7487.1 vs. uniprot
Match: A0A6A3FJD6_9STRA (Reverse transcriptase domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJD6_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.530e-11
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQGYWQMPLDPQEQEIFTMVTANGVYTPTRVPQGA 47
            + GA VF  LD L+GYWQ+PL P  QE+++ VT  G+YTPTRVP GA
Sbjct:  355 LEGARVFFVLDWLRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGA 401          
BLAST of mRNA_H-paniculata_contig27356.7487.1 vs. uniprot
Match: H3H555_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H555_PHYRM)

HSP 1 Score: 66.2 bits (160), Expect = 2.100e-11
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQGYWQMPLDPQEQEIFTMVTANGVYTPTRVPQGA 47
            + GA VF  LD  +GYWQ+PL P  QEI++ VT  G+YTPTRVP GA
Sbjct:   29 LEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGA 75          
BLAST of mRNA_H-paniculata_contig27356.7487.1 vs. uniprot
Match: H3H656_PHYRM (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H656_PHYRM)

HSP 1 Score: 66.2 bits (160), Expect = 2.100e-11
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQGYWQMPLDPQEQEIFTMVTANGVYTPTRVPQGA 47
            + GA VF  LD  +GYWQ+PL P  QEI++ VT  G+YTPTRVP GA
Sbjct:  755 LEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGA 801          
BLAST of mRNA_H-paniculata_contig27356.7487.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM)

HSP 1 Score: 66.2 bits (160), Expect = 2.100e-11
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQGYWQMPLDPQEQEIFTMVTANGVYTPTRVPQGA 47
            + GA VF  LD  +GYWQ+PL P  QEI++ VT  G+YTPTRVP GA
Sbjct:  757 LEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGA 803          
BLAST of mRNA_H-paniculata_contig27356.7487.1 vs. uniprot
Match: H3H7W2_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7W2_PHYRM)

HSP 1 Score: 65.5 bits (158), Expect = 3.920e-11
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQGYWQMPLDPQEQEIFTMVTANGVYTPTRVPQGA 47
            + GA VF  LD  +GYWQ+PL P  QE+++ VT  G+YTPTRVP GA
Sbjct:  188 LEGAKVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGA 234          
BLAST of mRNA_H-paniculata_contig27356.7487.1 vs. uniprot
Match: H3GLY9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLY9_PHYRM)

HSP 1 Score: 65.5 bits (158), Expect = 3.920e-11
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQGYWQMPLDPQEQEIFTMVTANGVYTPTRVPQGA 47
            + GA VF  LD  +GYWQ+PL P  QE+++ VT  G+YTPTRVP GA
Sbjct:  758 LEGAKVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGA 804          
BLAST of mRNA_H-paniculata_contig27356.7487.1 vs. uniprot
Match: A0A6A4AUS0_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4AUS0_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 4.770e-11
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQGYWQMPLDPQEQEIFTMVTANGVYTPTRVPQGA 47
            + GA VF  LD  +GYWQ+PL P  QE+++ VT  G+YTPTRVP GA
Sbjct:  134 LEGARVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGA 180          
BLAST of mRNA_H-paniculata_contig27356.7487.1 vs. uniprot
Match: A0A6A3GVC4_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3GVC4_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 5.320e-11
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQGYWQMPLDPQEQEIFTMVTANGVYTPTRVPQGA 47
            + GA VF  LD  +GYWQ+PL P  QE+++ VT  G+YTPTRVP GA
Sbjct:   98 LEGARVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGA 144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27356.7487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4C9T3_9STRA1.720e-1260.42Reverse transcriptase domain-containing protein (F... [more]
A0A6A3DJI3_9STRA1.120e-1158.33Reverse transcriptase domain-containing protein n=... [more]
A0A6A3FJD6_9STRA1.530e-1159.57Reverse transcriptase domain-containing protein n=... [more]
H3H555_PHYRM2.100e-1159.57Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3H656_PHYRM2.100e-1159.57Reverse transcriptase domain-containing protein n=... [more]
H3H4S7_PHYRM2.100e-1159.57Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3H7W2_PHYRM3.920e-1157.45Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
H3GLY9_PHYRM3.920e-1157.45Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A4AUS0_9STRA4.770e-1157.45Reverse transcriptase domain-containing protein (F... [more]
A0A6A3GVC4_9STRA5.320e-1157.45Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 20..47
e-value: 1.3E-10
score: 43.0
NoneNo IPR availableGENE3D3.30.70.270coord: 3..48
e-value: 1.3E-10
score: 43.0
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27356contigH-paniculata_contig27356:673..825 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27356.7487.1mRNA_H-paniculata_contig27356.7487.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27356 673..825 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27356.7487.1 ID=prot_H-paniculata_contig27356.7487.1|Name=mRNA_H-paniculata_contig27356.7487.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
MAGASVFCTLDLLQGYWQMPLDPQEQEIFTMVTANGVYTPTRVPQGAKCD
*
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