prot_H-paniculata_contig2715.7427.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2715.7427.1
Unique Nameprot_H-paniculata_contig2715.7427.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
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BLAST of mRNA_H-paniculata_contig2715.7427.1 vs. uniprot
Match: D7FRV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV5_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 8.890e-15
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0 
Query:   21 LSEFWSCLDPKQRDSLLTINGRCVMDTMDCELCRELLASAIRLTDEGALVD 71
            LSEFWSCLDPKQRDSLLTING+ V D +DC+LCR+L++SA    +E   VD
Sbjct:   36 LSEFWSCLDPKQRDSLLTINGKAVRDALDCDLCRDLVSSATFALEEETKVD 86
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BLAST of mRNA_H-paniculata_contig2715.7427.1 vs. uniprot
Match: A0A835ZFQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ4_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 4.840e-7
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0 
Query:   20 GLSEFWSCLDPKQRDSLLTINGRCVMDTMDCELCRELLASAIRLTDEGA 68
            GL +FW CL+  QR++LL+I    ++DT+ C  CR+LLASAI+  D+ A
Sbjct:   20 GLRQFWDCLERPQREALLSIGSDSLIDTVHCAGCRDLLASAIKNLDDDA 68
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2715.7427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRV5_ECTSI8.890e-1566.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFQ4_9STRA4.840e-748.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2715contigH-paniculata_contig2715:16582..16803 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2715.7427.1mRNA_H-paniculata_contig2715.7427.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2715 16582..16803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2715.7427.1 ID=prot_H-paniculata_contig2715.7427.1|Name=mRNA_H-paniculata_contig2715.7427.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
KNRSGNHGGGNKFGSAGGGGLSEFWSCLDPKQRDSLLTINGRCVMDTMDC
ELCRELLASAIRLTDEGALVDGV*
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