prot_H-paniculata_contig2703.7397.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2703.7397.1
Unique Nameprot_H-paniculata_contig2703.7397.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length964
Homology
BLAST of mRNA_H-paniculata_contig2703.7397.1 vs. uniprot
Match: D7FMF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF5_ECTSI)

HSP 1 Score: 473 bits (1217), Expect = 1.100e-139
Identity = 432/1084 (39.85%), Postives = 546/1084 (50.37%), Query Frame = 0
Query:    1 RVLWDVEASLNEGALTLINGEKPCLRIIFDVMAEFKKKKTNWKLELGLGALQAFGLGEAGGRATTLITRRTWRPHEVAAGGAEQMIQIGDFQVWKSGGITVEY---------------RSDSENIPDSGTSR--------STQEVSQE-------SAEQVDQPGQYFRGIISSSVVLVRVVLAPHQVMHSRVCL---SCMLGTRDMQLLTSAAQSKISRLQRTTRSSFLHAIGSSQRLEVTADIHAPLVVLPDTSNEKSRSSLLVMDLGHISFRRDDDSRTQPVVSNSAAQDEGDA-VARAPSLAVETRHAFVSKKAGSGLRVGGAV------GVAVDYWRLAIAGVQVVVADSASFFGEELGYRGAGAGQS----NTAIVEEFDLFVKIRTAKDTATDCFLGASVAANLPRLSFNLHSSAYQLLSRLLKNELKR--SASG----------VAASSGAGXXXXXXXXXXXXXXXXXXXXXXPIPSVSL-SPSAEARDWRIATVLATELEPVTEIPGEESPGYETDDVDGMLGASATAGSGGGARGSINARHRN-SRWHRRRRSGSGSS----------AHCGVAEEVRSENEEHGRGGRGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAVAGEGLTVEVRVSAPFISVLLVHDAGLLSPSVSPPLSPSSAVEEKNQSIGASMP------DDIDGKMAVGK-----------------------------------GRQRATAEGALALIEIHGLGIEFQKSPGR--HPTGVVAENGLDNPRQLQHQQXXXXXXQRIQ-------------QFVLNVMSFHIQDMYQQ-AGDK-FSYFLSSSKPPSPARSYAAIPVVSAAEAVRVA-HVIPER---GETGPAKTTVALSEVWMNWNPETVAALSIFAHGIYGERDGQQGVDGSGDXXXXXXXXXXXPTSGGESSSLQPVKASPGGRSREPTAAAAHERLGAAACVDVGGXXXXDGVKMKRDSVVLIEIGRVSLCLNKEIGGRRLLLLEAEDSTVKISKHHLPAGELVSSYNIALRSAALTDLSTAESRWRLLVCPSLKPNLPIPEVRVDIVK 954
            RVL+DVEASLNEGALTL+N  +PCLRIIFD+ A+ +K+KT+W+LELGLGALQAFGL   G RATTL+TRRTWRP +   GG   MIQIGDFQVWKSGGI VEY               RS   + P +G +R        S + VS         SA+Q D  G++  G  S +VV V+VV APHQ+MH+R C+   + M  TRDM+LL SAAQSKISRL+R TRSSFLHA+GSS+R+EVTADIHAPLVVLP+   ++SRSSLLV+DLGHI+FRRDD  R   V +       GD+ +A  P   V+   + V   +  GL     +       +A D W L + GVQVVVAD++SF G      G  A ++    +TAIVEE DL VK+RTA D +T+  +G  V ANLPRLS N+HSSAY LL+RLLKNEL+R  +A+G          V++S                            PS+S  SP    R   I  VLA+ELEPVTE+PGE   G   D  DG+ GA    G G     S+  R  + SR H RRRS SGS           + CG  + V  E  E   G  GD                                   GL +EVRVSAP I V LVHD    S S     S + A E   +S   S P         + +  VG+                                   G     AEGAL L+EI GLG++++ + G   H +G  A    D  +Q           +                +F L+V SF ++DM+Q+  GD  FSY LSS  P S A     +P     EA+R+  H + E+   G+   ++T V L  VW NWNPETV ALS+F +G+YG   G       GDXXXXXX          E S     +  P  RS +  ++A+   +   A V         G        V  E GR         GG   ++++AE     I K H   G  VS+Y+IAL  A+LTDL T  SRWR LVCPSL   LP  EVR+DIV+
Sbjct:  649 RVLFDVEASLNEGALTLVNAGQPCLRIIFDLKADLQKQKTDWRLELGLGALQAFGLAGQGARATTLLTRRTWRPPKADGGGDAGMIQIGDFQVWKSGGIIVEYQGEDPDNAATNKGGGRSXXXSTP-AGPARKAIASPLVSPRAVSSSGGDGGGVSADQADSAGRWGGGG-SGAVVTVKVVFAPHQLMHNRACVDQVTSMFATRDMRLLASAAQSKISRLKRATRSSFLHALGSSKRVEVTADIHAPLVVLPEDLEDRSRSSLLVLDLGHIAFRRDDALRRDAVETPP-----GDSPLASPPVFDVDVPSSSVEGVSAPGLLTADPLVANVPEDIAQDDWLLDVTGVQVVVADASSFLGPASSDNGPSANKAALSNDTAIVEEVDLNVKVRTATDLSTNGLIGVRVEANLPRLSCNVHSSAYLLLTRLLKNELERPTTAAGADRFPPESPLVSSSREEERMTRVPQTGTRGAVASRLFPASATPSLSPGSPGGTQRPRLIKAVLASELEPVTEVPGE---GPLEDSDDGVGGA----GVGRAGVFSLTPRRNSLSRGHHRRRSSSGSGCIHSPMPVEDSGCGGGQGV--EGSERVVGDAGDGGDRVEEGYLEQPQ-----------------TPAAGLVLEVRVSAPVICVSLVHDDNSTSTSGGNHASGNGAPE---RSATTSSPARHIVRGGPESENRVGRPXXXXXXXXXXXXXXXXEEGESGLPGVRLAAPPPVGASETVAEGALVLLEICGLGVDYRDAVGGDGHGSGGRAVVDADATKQEDRNPAVEPPSKGDPPGADADGNGDSPCKFCLSVSSFRVKDMHQRLTGDAGFSYLLSSQDPSSSAPLPLLLPEE---EALRITYHTLGEKRTGGDRSGSRTVVVLGGVWGNWNPETVGALSVFTYGMYGSSGGGGTAPEIGDXXXXXXRPNAEQGKVDERSG----RGVPSPRSEDLPSSASGRSIPEQAGVQAETQAERTGAA----EPVSAEKGRR--------GGA--IIVKAE-----IFKCHHSEGS-VSNYSIALGFASLTDLGTKHSRWRSLVCPSLDSTLPPQEVRLDIVQ 1669          
BLAST of mRNA_H-paniculata_contig2703.7397.1 vs. uniprot
Match: A0A6H5K6C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6C3_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 1.170e-53
Identity = 128/239 (53.56%), Postives = 154/239 (64.44%), Query Frame = 0
Query:    1 RVLWDVEASLNEGALTLINGEKPCLRIIFDVMAEFKKKKTNWKLELGLGALQAFGLGEAGGRATTLITRRTWRPHEVAAGGAEQMIQIGDFQVWKSGGITVEY-RSDSENIPDS-GTSRSTQEVSQESAEQVDQPGQYFRGIISSS---------------------------VVLVRVVLAPHQVMHSRVCL---SCMLGTRDMQLLTSAAQSKISRLQRTTRSSFLHAIGSSQRLEV 207
            RVL+DVEASLNEGALTL+N  +PCLRIIFD+ A+  K+KT+W+LELGLGALQAFGL   G RATTL+TRRTWRP +   GG   MIQIGDFQVWKSGGI VEY R D +N   + G  RS+       A +           +S                             VV V+VV APHQ+MH+R C+   + M  TRDM+LL SAAQSKISRL+R TRSSF+HA+GSS+R+EV
Sbjct:  629 RVLFDVEASLNEGALTLVNAGQPCLRIIFDLKADLVKQKTDWRLELGLGALQAFGLAGQGARATTLLTRRTWRPPKAVGGGDAGMIQIGDFQVWKSGGIIVEYQRVDPDNAASNEGGGRSSSSTPAGPARKALASPLVSPRAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTVKVVFAPHQLMHNRPCVDQVTSMFATRDMRLLASAAQSKISRLKRATRSSFMHALGSSKRVEV 867          
BLAST of mRNA_H-paniculata_contig2703.7397.1 vs. uniprot
Match: A0A6H5JYL2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL2_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 2.210e-38
Identity = 205/613 (33.44%), Postives = 269/613 (43.88%), Query Frame = 0
Query:  431 SLSPSAEARDWR---IATVLATELEPVTEIPGEESPGYETDDVDGMLGASATAGSGGGARG--SINARHRN-SRWHRRRRSGSGSS----------AHCGVAEEVRSENEEHGRGGRGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAVAGEGLTVEVRVSAPFISVLLVHDAGLLSPSVS---------------PPLSPSSAV----EEKNQSIGASMPD---------DIDG----------KMAVGK-GRQRAT-AEGALALIEIHGLGIEFQK--------SPGRHPTGVVAENGLDNPRQLQHQQXXXXXXQRIQ-------QFVLNVMSFHIQDMYQQA-GDK-FSYFLSSSKPPSPARSYAAIPVVSAAEAVRVA-HVIPER--GETGP-AKTTVALSEVWMNWNPETVAALSIFAHGIYGERDG----QQGVDGSGDXXXXXXXXXXXPTSGGE---SSSLQPVKASPGG---RSREPTAAAAHERLGAA--ACVDVGGXXXXDGVKMKRDSVVLIEIGRVSLCLNKEIGGRRLLLLEAEDSTVKISKHHLPAGELVSSYNIALRSAALTDLSTAESRWRLLVCPSLKPNLPIPEVRVDIVK 954
            SLSP +     R   +  VLA+ELEPVTE+PGE  P    +D DG +G     G G G  G  S+  R  + SR H R RS  GS           + CG  + V       G  G G                                    GL +EVRVSAP I V LVHD    SPS S                  SP+  +     E    +G   P            DG          ++A  + GR   T AEGAL L+EI GLG++++         S GR      A    D    ++                     F L+V SF ++DM+Q+  GD  FSY LSS  P S A     +P     EA+R+  H + E+  G+ G  ++T V L  VW NWNPETV AL++F +G+YG   G     +  DG G+             + G    S   + + +S  G      E  A    ER GAA  A  + G          KR  V++ ++ RVSL LNKE+ GRRLLLLEA +S+ +I K+H   G  VS+Y+IAL SA+LT+L T  SRWR LVCPSL   LP  EVR+DI++
Sbjct:  403 SLSPGSPGETQRPRLVKAVLASELEPVTEVPGEGPP----EDSDGGVG-----GEGVGRAGVFSLTPRRNSLSRGHHRSRSIPGSGCMHSPMLVEDSGCGGGQGVEGAERVVGEAGDGGDRDEEGYLEQPQ-------------------APDAGLVLEVRVSAPVICVSLVHDDN--SPSTSGGNHASGNGAPQRSATTFSPARHIVGGGPENENRVGRPPPSKGGAGHAAVSCDGGRGGFGLPGVRLAAPQPGRASETVAEGALVLLEICGLGVDYRDAVGGGDRCSGGRAIADADATKQDDGNPAVEPPSKGDPPGADANVDDDSPCMFCLSVSSFRVKDMHQRVTGDAGFSYLLSSQDPSSSASLPLLLPEE---EALRITYHTLAEKRAGDGGSGSRTVVVLGGVWGNWNPETVGALAVFTYGMYGNSGGGGTAPETGDGGGEGGRPNAEEGKVENNSGRGVPSPRSEGLPSSARGSIPEQAEVEAGKRAERTGAAEPASAETG----------KRGGVIIAKVKRVSLWLNKEVHGRRLLLLEARESSAEIFKYHHSDGS-VSNYSIALGSASLTNLGTKHSRWRSLVCPSLDSTLPPQEVRLDIIQ 971          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2703.7397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMF5_ECTSI1.100e-13939.85FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K6C3_9PHAE1.170e-5353.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYL2_9PHAE2.210e-3833.44FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031642VPS13, repeated coiled regionPFAMPF16910VPS13_mid_rptcoord: 173..386
e-value: 8.5E-15
score: 54.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2703contigH-paniculata_contig2703:1706..18732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2703.7397.1mRNA_H-paniculata_contig2703.7397.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2703 1706..18732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2703.7397.1 ID=prot_H-paniculata_contig2703.7397.1|Name=mRNA_H-paniculata_contig2703.7397.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=964bp
RVLWDVEASLNEGALTLINGEKPCLRIIFDVMAEFKKKKTNWKLELGLGA
LQAFGLGEAGGRATTLITRRTWRPHEVAAGGAEQMIQIGDFQVWKSGGIT
VEYRSDSENIPDSGTSRSTQEVSQESAEQVDQPGQYFRGIISSSVVLVRV
VLAPHQVMHSRVCLSCMLGTRDMQLLTSAAQSKISRLQRTTRSSFLHAIG
SSQRLEVTADIHAPLVVLPDTSNEKSRSSLLVMDLGHISFRRDDDSRTQP
VVSNSAAQDEGDAVARAPSLAVETRHAFVSKKAGSGLRVGGAVGVAVDYW
RLAIAGVQVVVADSASFFGEELGYRGAGAGQSNTAIVEEFDLFVKIRTAK
DTATDCFLGASVAANLPRLSFNLHSSAYQLLSRLLKNELKRSASGVAASS
GAGTTSHEQQVQPPLFTASSAASPPPIPSVSLSPSAEARDWRIATVLATE
LEPVTEIPGEESPGYETDDVDGMLGASATAGSGGGARGSINARHRNSRWH
RRRRSGSGSSAHCGVAEEVRSENEEHGRGGRGDDGGGGDSAEWGEESDDD
DEFDGEQPPPAGGAVAGEGLTVEVRVSAPFISVLLVHDAGLLSPSVSPPL
SPSSAVEEKNQSIGASMPDDIDGKMAVGKGRQRATAEGALALIEIHGLGI
EFQKSPGRHPTGVVAENGLDNPRQLQHQQHQHQHQQRIQQFVLNVMSFHI
QDMYQQAGDKFSYFLSSSKPPSPARSYAAIPVVSAAEAVRVAHVIPERGE
TGPAKTTVALSEVWMNWNPETVAALSIFAHGIYGERDGQQGVDGSGDDGN
GASGTNTSPTSGGESSSLQPVKASPGGRSREPTAAAAHERLGAAACVDVG
GGGGGDGVKMKRDSVVLIEIGRVSLCLNKEIGGRRLLLLEAEDSTVKISK
HHLPAGELVSSYNIALRSAALTDLSTAESRWRLLVCPSLKPNLPIPEVRV
DIVKVYMMPGNLC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031642VPS13_mid_rpt