prot_H-paniculata_contig2668.7289.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2668.7289.1
Unique Nameprot_H-paniculata_contig2668.7289.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length91
Homology
BLAST of mRNA_H-paniculata_contig2668.7289.1 vs. uniprot
Match: UPI001026D7DE (hypothetical protein n=1 Tax=Enterobacter cloacae complex sp. CH23B TaxID=2511986 RepID=UPI001026D7DE)

HSP 1 Score: 58.2 bits (139), Expect = 1.470e-8
Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0
Query:    6 RFKLKDLGDAEFYMGCHVTRERKARELKVDQHMYRQSMAEKFGVK--KTSRIPAMSGVPTLSKGDQQKTPEEKDEMTKFPYREAMGAL 91
            +F +KDLGDA  ++G H+ R+RK   L++ Q  Y   + ++F ++  K+   P M     LSK D  KT  EK+EM K PY   +G L
Sbjct:   45 QFSMKDLGDANHFLGMHIKRDRKRGILELSQEKYIHKVLKRFSMQGGKSLSTP-MQAYSKLSKEDSPKTVAEKEEMAKVPYSSVVGNL 131          
BLAST of mRNA_H-paniculata_contig2668.7289.1 vs. uniprot
Match: A0A5A7VE22_CUCME (Gag/pol protein n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7VE22_CUCME)

HSP 1 Score: 57.4 bits (137), Expect = 1.420e-7
Identity = 32/87 (36.78%), Postives = 53/87 (60.92%), Query Frame = 0
Query:    7 FKLKDLGDAEFYMGCHVTRERKARELKVDQHMYRQSMAEKFGVKKTSR--IPAMSGVPTLSKGDQQKTPEEKDEMTKFPYREAMGAL 91
            F++KDLGDA++ +G  + R RK+R L + Q  Y   M  ++ ++ + +  +    G+  LSK    KTP+E ++M KFPY  A+G+L
Sbjct:  102 FQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGI-HLSKKQCPKTPQEVEDMRKFPYASAVGSL 187          
BLAST of mRNA_H-paniculata_contig2668.7289.1 vs. uniprot
Match: A0A5S6QMP8_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QMP8_TRIMR)

HSP 1 Score: 56.6 bits (135), Expect = 2.380e-7
Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    6 RFKLKDLGDAEFYMGCHVTRERKARELKVDQHMYRQSMAEKFGVK--KTSRIPAMSGVPTLSKGDQQKTPEEKDEMTKFPYREAMGAL 91
            +F++KDLG+A + +G  +  +++ + L +DQ  +   M E FG+   K ++ P  S    LSK    KT +E+ EM K PYREA+G L
Sbjct:  222 QFEMKDLGEAHWCLGMRIVCDKEHKRLSIDQERHIDQMLETFGMTDCKVAKTPLDSNQ-VLSKDMAPKTEDERTEMQKVPYREAVGCL 308          
BLAST of mRNA_H-paniculata_contig2668.7289.1 vs. uniprot
Match: A0A6A3IVK9_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3IVK9_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 4.990e-7
Identity = 31/87 (35.63%), Postives = 48/87 (55.17%), Query Frame = 0
Query:    6 RFKLKDLGDAEFYMGCHVTRERKARELKVDQHMYRQSMAEKFGVKKTSRIPAMSGVPT-LSKGDQQKTPEEKDEMTKFPYREAMGAL 91
            RF++ DLG   + +G H+ R R  R + V Q  Y   + ++FG+ +   + +       LS+ D  +T EEK  M KFPYREA+G+ 
Sbjct:   53 RFQMADLGGVSYPLGWHIERRRSERIIFVHQEKYATKVLDRFGLAQCRPVRSPEETSQKLSESDFPQTEEEKQNMEKFPYREAVGSF 139          
BLAST of mRNA_H-paniculata_contig2668.7289.1 vs. uniprot
Match: A0A6A3HS58_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HS58_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.260e-6
Identity = 30/87 (34.48%), Postives = 48/87 (55.17%), Query Frame = 0
Query:    6 RFKLKDLGDAEFYMGCHVTRERKARELKVDQHMYRQSMAEKFGVKKTSRIPAMSGVPT-LSKGDQQKTPEEKDEMTKFPYREAMGAL 91
            RF++ DLG   + +G H+ R R  R + V Q  Y   + ++FG+ +   + +       LS+ D  +T  EK +M KFPYREA+G+ 
Sbjct:  393 RFQMTDLGGVSYLLGWHIERRRSERIIFVHQEKYATKVLDRFGLAQCRPVRSPEETSQKLSESDCPQTDAEKQDMEKFPYREAVGSF 479          
BLAST of mRNA_H-paniculata_contig2668.7289.1 vs. uniprot
Match: A0A6A4BXP3_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4BXP3_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.290e-6
Identity = 30/87 (34.48%), Postives = 48/87 (55.17%), Query Frame = 0
Query:    6 RFKLKDLGDAEFYMGCHVTRERKARELKVDQHMYRQSMAEKFGVKKTSRIPAMSGVPT-LSKGDQQKTPEEKDEMTKFPYREAMGAL 91
            RF++ DLG   + +G H+ R R  R + V Q  Y   + ++FG+ +   + +       LS+ D  +T  EK +M KFPYREA+G+ 
Sbjct:  946 RFQMTDLGGVSYLLGWHIERRRSERIIFVHQEKYATKVLDRFGLAQCRPVRSPEETSQKLSESDCPQTDAEKQDMEKFPYREAVGSF 1032          
BLAST of mRNA_H-paniculata_contig2668.7289.1 vs. uniprot
Match: A0A085MVP5_9BILA (Uncharacterized protein n=2 Tax=Trichuris suis TaxID=68888 RepID=A0A085MVP5_9BILA)

HSP 1 Score: 54.3 bits (129), Expect = 1.760e-6
Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    6 RFKLKDLGDAEFYMGCHVTRERKARELKVDQHMYRQSMAEKFGVK--KTSRIPAMSGVPTLSKGDQQKTPEEKDEMTKFPYREAMGAL 91
            +F++KDLG A + +G  + +++K   L +DQ  Y   + E FG+   K ++ P +     LSK    KT EE+ EM K PYREA+G++
Sbjct: 1025 QFEMKDLGKAHWCLGIRINQDKKFGTLSIDQARYIDQILETFGMVDCKVAKTP-LDPNQLLSKEMSPKTEEERMEMKKIPYREAVGSV 1111          
BLAST of mRNA_H-paniculata_contig2668.7289.1 vs. uniprot
Match: A0A6G0PJV2_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0PJV2_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.300e-6
Identity = 30/87 (34.48%), Postives = 47/87 (54.02%), Query Frame = 0
Query:    6 RFKLKDLGDAEFYMGCHVTRERKARELKVDQHMYRQSMAEKFGVKKTSRIPAMSGVPT-LSKGDQQKTPEEKDEMTKFPYREAMGAL 91
            RF++ DLG   + +G H+ R R  R + V Q  Y   + ++FG+ +   + +       LS+ D  +T  EK  M KFPYREA+G+ 
Sbjct:  201 RFQMTDLGGVSYLLGWHIERRRSERIIFVHQEKYATKVLDRFGLAQCRPVRSPEETSQKLSESDCPQTDAEKQNMEKFPYREAVGSF 287          
BLAST of mRNA_H-paniculata_contig2668.7289.1 vs. uniprot
Match: A0A6A3JRU5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JRU5_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 7.740e-6
Identity = 29/87 (33.33%), Postives = 46/87 (52.87%), Query Frame = 0
Query:    6 RFKLKDLGDAEFYMGCHVTRERKARELKVDQHMYRQSMAEKFGVKKTSRIPAMSGVP-TLSKGDQQKTPEEKDEMTKFPYREAMGAL 91
            RF++ DLG     +G H+ R R    + V Q  Y   +  +FG+ +   + +      TLS+ D  +T  EK ++ KFPYREA+G+ 
Sbjct:   30 RFQMIDLGGVSSLLGWHIERRRSEHVIFVHQEKYATKVLNRFGLAQCRPVRSPEETSQTLSESDCPQTDAEKQDIEKFPYREAVGSF 116          
BLAST of mRNA_H-paniculata_contig2668.7289.1 vs. uniprot
Match: A0A6A3GWX5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GWX5_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.090e-5
Identity = 32/89 (35.96%), Postives = 47/89 (52.81%), Query Frame = 0
Query:    6 RFKLKDLGDAEFYMGCHVTRERKARELKVDQHMYRQSMAEKFGVKKTSRIPAMSGVPT---LSKGDQQKTPEEKDEMTKFPYREAMGAL 91
            RF++ DLG   + +G H+ R R  R + V Q  Y   + ++  + +    P  S   T   LS+ D  +T  EK EM KFPYREA+G+ 
Sbjct:  291 RFQMTDLGGVSYLLGWHIERRRSERIIFVHQEKYTTKVLDRISLDQCR--PVRSSEETSQKLSESDCPQTDAEKQEMEKFPYREAVGSF 377          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2668.7289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
UPI001026D7DE1.470e-838.64hypothetical protein n=1 Tax=Enterobacter cloacae ... [more]
A0A5A7VE22_CUCME1.420e-736.78Gag/pol protein n=2 Tax=Cucumis melo var. makuwa T... [more]
A0A5S6QMP8_TRIMR2.380e-737.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3IVK9_9STRA4.990e-735.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3HS58_9STRA1.260e-634.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A4BXP3_9STRA1.290e-634.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A085MVP5_9BILA1.760e-637.50Uncharacterized protein n=2 Tax=Trichuris suis Tax... [more]
A0A6G0PJV2_9STRA2.300e-634.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3JRU5_9STRA7.740e-633.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3GWX5_9STRA1.090e-535.96Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2668contigH-paniculata_contig2668:10214..10486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2668.7289.1mRNA_H-paniculata_contig2668.7289.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2668 10214..10486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2668.7289.1 ID=prot_H-paniculata_contig2668.7289.1|Name=mRNA_H-paniculata_contig2668.7289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bp
TQPGGRFKLKDLGDAEFYMGCHVTRERKARELKVDQHMYRQSMAEKFGVK
KTSRIPAMSGVPTLSKGDQQKTPEEKDEMTKFPYREAMGAL
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