prot_H-paniculata_contig26641.7280.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26641.7280.1
Unique Nameprot_H-paniculata_contig26641.7280.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length247
Homology
BLAST of mRNA_H-paniculata_contig26641.7280.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 8.650e-81
Identity = 130/247 (52.63%), Postives = 164/247 (66.40%), Query Frame = 0
Query:    1 IPRNEHALQARLMVCAEMQEAGHRGVDATVNRLAAYCMWDEMEANVAEFVRQCLHCLNVRSASRVPRSLGELLHGADVGGVLHFDLLHLGASDPLKEHEVIRG-GCPYLLVLLDDVNDHVWLEAALECTAKVAAATVLRWCTVFGAPGVFVSNTARNVKNRLVSLLATALGAEHRFCVANSAWSNGTVERMNREVVNTFKAVLNEADRPVSEWPVAVPVVQWALNPAHRARLGTTPHQLMFGRAPRT 246
            IP     +Q RLM+CA M+EAGHRGV AT++RL  YC W  M+ +V EFV+QCLHC++ +S   VPR  GE +HG   G VLHFD LH+G S PL    +    G  YLLV++DD+++  W+E    CTA++ A  +L WC   G P V+VS+TA + KN ++  L  ALG E RF VANS WSNGT ERM RE+V T KAVL E  R V +W   VP VQWALN A+R R  +TP+ +MFGRAPRT
Sbjct:  407 IPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRT 653          
BLAST of mRNA_H-paniculata_contig26641.7280.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 5.780e-78
Identity = 129/248 (52.02%), Postives = 168/248 (67.74%), Query Frame = 0
Query:    1 IPRNEHALQARLMVCAEMQEAGHRGVDATVNRLAAYCMWDEMEANVAEFVRQCLHCLNVRSASRVPRSLGELLHGADVGGVLHFDLLHLGASDPLKEHEVIRG-GCPYLLVLLDDVNDHVWLEAALECTAKVAAATVLRWCTVFGAPGVFVSNTARNVKNRLVSLLATALGAEHRFCVANSAWSNGTVERMNREVVNTFKAVLNEADRPVSEWPVAVPVVQWALNPAHRARLGTTPHQLMFGRAPRTV 247
            IP    ALQ RLMVCA M+EAGHRG  AT+ RL+ YC W  ME +V +FV+QCLHC++ ++  +VPR LGE +HG   G V+HFD L++GAS PL +  +    G  Y+LV++DD+++ VWLE    CTA + A  +L WC + G P V+VS+TA + KN +++ L TALG +  F VANS WSNGT ERM REVV T KA++ E      +W   VP VQWALN A R R G+TP+ +MFGRAPRT 
Sbjct: 1285 IPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTA 1532          
BLAST of mRNA_H-paniculata_contig26641.7280.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 7.790e-78
Identity = 130/247 (52.63%), Postives = 164/247 (66.40%), Query Frame = 0
Query:    1 IPRNEHALQARLMVCAEMQEAGHRGVDATVNRLAAYCMWDEMEANVAEFVRQCLHCLNVRSASRVPRSLGELLHGADVGGVLHFDLLHLGASDPLKEHEVIRG-GCPYLLVLLDDVNDHVWLEAALECTAKVAAATVLRWCTVFGAPGVFVSNTARNVKNRLVSLLATALGAEHRFCVANSAWSNGTVERMNREVVNTFKAVLNEADRPVSEWPVAVPVVQWALNPAHRARLGTTPHQLMFGRAPRT 246
            IP     +Q RLM+CA M+EAGHRGV AT++RL  YC W  M+ +V EFV+QCLHC++ +S   VPR  GE +HG   G VLHFD LH+G S PL    +    G  YLLV++DD+++  W+E    CTA++ A  +L WC   G P V+VS+TA + KN ++  L  ALG E RF VANS WSNGT ERM RE+V T KAVL E  R V +W   VP VQWALN A+R R  +TP+ +MFGRAPRT
Sbjct: 1183 IPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRT 1429          
BLAST of mRNA_H-paniculata_contig26641.7280.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 1.080e-64
Identity = 107/206 (51.94%), Postives = 136/206 (66.02%), Query Frame = 0
Query:   42 MEANVAEFVRQCLHCLNVRSASRVPRSLGELLHGADVGGVLHFDLLHLGASDPLKEHEVIRG-GCPYLLVLLDDVNDHVWLEAALECTAKVAAATVLRWCTVFGAPGVFVSNTARNVKNRLVSLLATALGAEHRFCVANSAWSNGTVERMNREVVNTFKAVLNEADRPVSEWPVAVPVVQWALNPAHRARLGTTPHQLMFGRAPRT 246
            M+ +V EFV+QCLHC++ +S   VPR  GE +HG   G VLHFD LH+G S PL    +    G  YLLV++DD+++  W+E    CTA++ A  +L WC   G P V+VS+TA + KN ++  L  ALG E RF VANS WSNGT ERM REVV T KAVL E  R + +W   VP VQWALN A+R R  +TP+ +MFGRAPRT
Sbjct:    1 MDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRT 206          
BLAST of mRNA_H-paniculata_contig26641.7280.1 vs. uniprot
Match: A0A6A3VH71_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VH71_9STRA)

HSP 1 Score: 133 bits (335), Expect = 9.250e-33
Identity = 80/242 (33.06%), Postives = 118/242 (48.76%), Query Frame = 0
Query:    1 IPRNEHALQARLMVCAEMQEAGHRGVDATVNRLAAYCMWDEMEANVAEFVRQCLHCLNVRSASRVPRSLGELLHGADVGGVLHFDLLHLGASDPLKEHEVIRGGCPYLLVLLDDVNDHVWLEAALECTAKVAAATVLRWCTVFGAPGVFVSNTARNVKNRLVSLLATALGAEHRFCVANSAWSNGTVERMNREVVNTFKAVLNEADRPVSEWPVAVPVVQWALNPAHRARLGT-TPHQLMFG 241
            IP     L  RL + A     GHRG  AT   L      + ++  VA FVRQC  CL+ +  + +PR  GE L  ++  GVLHFD L +G S          G   Y+LVL D  + +  L  A    + V    +L W   FG P  ++S+   N KN +V+ L+  L ++  F  A   W NG+VER+NR+++   + ++ E     ++WP  +P+VQ +LN      LG   P +L  G
Sbjct:  113 IPAEAAGLLQRLFIIAHCGAQGHRGGAATAEHLRRLFAIEHLDTKVAAFVRQCRLCLHSKGGNIIPRPWGETLECSERNGVLHFDYLSMGES---------FGDSKYILVLKDHASHYCELVVADTADSSVTVEALLAWHARFGVPPTWISDQGSNFKNEVVAELSRRLRSQQEFTPAYCPWINGSVERVNRDILQVIRTMILEYKINHTDWPYLMPMVQASLNHTAVPSLGNKAPVELFTG 345          
BLAST of mRNA_H-paniculata_contig26641.7280.1 vs. uniprot
Match: A0A6A3XKC0_9STRA (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3XKC0_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.380e-32
Identity = 76/224 (33.93%), Postives = 117/224 (52.23%), Query Frame = 0
Query:    1 IPRNEHALQARLMVCAEMQEAGHRGVDATVNRLAAYCMWDEMEANVAEFVRQCLHCLNVRSASRVPRSLGELLHGADVGGVLHFDLLHLGASDPLKEHEVIRGGCPYLLVLLDDVNDHVWLEAALECTAKVAAATVLRWCTVFGAPGVFVSNTARNVKNRLVSLLATALGAEHRFCVANSAWSNGTVERMNREVVNTFKAVLNEADRPVSEWPVAVPVVQWALN 224
            IPR    L  RL++ A     GHRGV    N ++       +   V +F  +CL CL+V+  + +PR   E  H  +    LH+D L LG S          G   Y+LVL D+    V L A  + T+ VAA  +L W + FGAP V+VS++  + K+++++ L   L     F +A S W NG+VER+NR+++   KA+  E    + +WP  +P+VQ ++N
Sbjct:  123 IPREARDLTQRLLIIAHCGRNGHRGVHVMENLVSRLFYISGLNRIVRDFCVKCLLCLHVKGGTVIPRPFSETHHTFERNETLHWDFLTLGES---------FGSSHYVLVLKDEATHFVELVACDDPTSAVAATAILDWYSRFGAPIVWVSDSGSHFKSKVIAELCRRLKGRQEFILAYSPWKNGSVERVNRDILQVLKALALEFRVSLQDWPHLLPLVQSSIN 337          
BLAST of mRNA_H-paniculata_contig26641.7280.1 vs. uniprot
Match: A0A0G4J7H8_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7H8_PLABS)

HSP 1 Score: 135 bits (339), Expect = 2.000e-32
Identity = 74/243 (30.45%), Postives = 120/243 (49.38%), Query Frame = 0
Query:    7 ALQARLMVCAEMQEAGHRGVDATVNRLAAYCMWDEMEANVAEFVRQCLHCLNVRSASRVPRSLGELLHGADVGGVLHFDLLHL----GASDPLKEHEVIRGGCPYLLVLLDDVNDHVWLEAALECTAKVAAATVLRWCTVFGAPGVFVSNTARNVKNRLVSLLATALGAEHRFCVANSAWSNGTVERMNREVVNTFKAVLNEADRPVSEWPVAVPVVQWALNPAHRARL-GTTPHQLMFGRAP 244
            +L+ R+++      AGHR  +     + +   W +++ +V +  +QC+HC+  R   +VPR LGE LHG     V+  D L++    G   P K          Y+LV+ DD + +V L      T++ AA  + +W   F  P   V++   +    ++  L+     +H   +A   W+NGTVER NR V+N  +++L+EA      WP   PVVQ A+N A   RL G  P+ ++ G  P
Sbjct:  701 SLRLRILIIGHSGSAGHRASEVAKQTIMSRFCWPDIDKDVEQMCQQCIHCITTRGGRKVPRPLGEALHGQRPFQVMAMDYLYVEPVRGTDHPYK----------YILVMKDDYSGYVRLVPCQGATSRAAADAINQWIADFETPEYLVTDGGSHFTAEVIKELSRLREIQHHITLAYCPWANGTVERANRTVLNMLRSILSEAQISTHNWPYLCPVVQHAINHAPSKRLAGNAPYTVITGNQP 933          
BLAST of mRNA_H-paniculata_contig26641.7280.1 vs. uniprot
Match: A0A6A3GZ49_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GZ49_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.680e-31
Identity = 75/224 (33.48%), Postives = 115/224 (51.34%), Query Frame = 0
Query:    1 IPRNEHALQARLMVCAEMQEAGHRGVDATVNRLAAYCMWDEMEANVAEFVRQCLHCLNVRSASRVPRSLGELLHGADVGGVLHFDLLHLGASDPLKEHEVIRGGCPYLLVLLDDVNDHVWLEAALECTAKVAAATVLRWCTVFGAPGVFVSNTARNVKNRLVSLLATALGAEHRFCVANSAWSNGTVERMNREVVNTFKAVLNEADRPVSEWPVAVPVVQWALN 224
            IP     L  RL++ A     GHRG+    N +        ++  V +F  +CL CL+V+    +PR   E  H  +    LH+D L LG S          G   Y LVL D+    V L A    T++VAA+ +L W + FG P V+VS+T  + K+++++ L+  L     F +A S W NG+VER+NR+++   KA+  E    V +WP  +P+VQ ++N
Sbjct:  177 IPSEATDLTQRLLIIAHCGRNGHRGMHVMQNHIRRLFYVGGLDRIVKDFCAKCLLCLHVKGGVVIPRPFSETHHTFERNETLHWDFLTLGES---------FGTSRYALVLKDEATHFVDLVACDSSTSEVAASAILDWYSRFGVPTVWVSDTGSHFKSKVIAELSRRLKGRQEFILAYSPWKNGSVERVNRDILQVLKALALEFKVSVHDWPYLLPLVQSSVN 391          
BLAST of mRNA_H-paniculata_contig26641.7280.1 vs. uniprot
Match: A0A6A3KUK3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3KUK3_9STRA)

HSP 1 Score: 130 bits (327), Expect = 3.810e-31
Identity = 75/224 (33.48%), Postives = 116/224 (51.79%), Query Frame = 0
Query:    1 IPRNEHALQARLMVCAEMQEAGHRGVDATVNRLAAYCMWDEMEANVAEFVRQCLHCLNVRSASRVPRSLGELLHGADVGGVLHFDLLHLGASDPLKEHEVIRGGCPYLLVLLDDVNDHVWLEAALECTAKVAAATVLRWCTVFGAPGVFVSNTARNVKNRLVSLLATALGAEHRFCVANSAWSNGTVERMNREVVNTFKAVLNEADRPVSEWPVAVPVVQWALN 224
            IPR    L  RL++ A     GHRGV    N ++       +   V +F  +CL CL+V+  + +PR   E  H  +    LH+D L L  S          G   Y+LVL D+    V L A  + T+ VAA  +L W + FGAP V+VS++  + K+++++ L   L     F +A S W NG+VER+NR+++   KA+  E    + +WP  +P+VQ ++N
Sbjct:  123 IPREARDLTQRLLIIAHCGRNGHRGVHVMENHVSRLFYISGLNRIVRDFCVKCLLCLHVKGGTVIPRPFSETHHTFERNETLHWDFLTLDES---------FGSSRYVLVLKDEATHFVELVACDDPTSAVAATAILDWYSRFGAPIVWVSDSGSHFKSKVIAELCRRLKRRQEFILAYSPWKNGSVERVNRDILQVLKALALEFRVSLQDWPHLLPLVQSSIN 337          
BLAST of mRNA_H-paniculata_contig26641.7280.1 vs. uniprot
Match: A0A485LNJ2_9STRA (Aste57867_23616 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNJ2_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.520e-31
Identity = 82/248 (33.06%), Postives = 117/248 (47.18%), Query Frame = 0
Query:    1 IPRNEHALQARLMVCAEMQEAGHRGVDATVNRLAAYCMWDEMEANVAEFVRQCLHCLNVRSASRVPRSLGELLHGADVGGVLHFDLLHLGAS-DPLKEHEVIRGGCPYLLVLLDDVNDHVWLEAALECTAKVAAATVLRWCTVFGAPGVFVSNTARNVKNRLVSLLATALGAEHRFCVANSAWSNGTVERMNREVVNTFKAVLNEADRPVSEWPVAVPVVQWALNPAHRARL-GTTPHQLMFGRAPRT 246
            IPR+   L  R++V A     GHRG D   + L      D ++  V  FVR+C  C  V+    + R   EL H       LHFD L +G S  P+K          Y+LVL DD+     L A    TA V    +L W   FG P  ++S+   + KN ++  +A  L  +H+F +  S W NGT+ER+NR+++   + +L E      EW   +PVVQ  LN    A L G  P +    + P+T
Sbjct:  965 IPRDATCLIQRMLVIAHCGSMGHRGEDVMYSHLRRQFWIDNLKQLVQHFVRECPMCPLVKGERVIQRPHSELWHAERANEGLHFDFLFMGDSFGPMK----------YILVLKDDLTHFCELIACEAPTADVVVTALLDWHKRFGIPETWISDQGSHFKNHVMKTVAAKLKVDHKFTITYSPWRNGTIERLNRDILQVMRVLLKEYHLDEREWEYLLPVVQANLNQTPTASLRGKCPMEAFCLKPPKT 1202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26641.7280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCX8_9PHAE8.650e-8152.63Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K5A5_9PHAE5.780e-7852.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE7.790e-7852.63Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVS6_9PHAE1.080e-6451.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3VH71_9STRA9.250e-3333.06Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3XKC0_9STRA1.380e-3233.93Integrase catalytic domain-containing protein n=2 ... [more]
A0A0G4J7H8_PLABS2.000e-3230.45Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A6A3GZ49_9STRA1.680e-3133.48Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3KUK3_9STRA3.810e-3133.48Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]
A0A485LNJ2_9STRA4.520e-3133.06Aste57867_23616 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 96..196
e-value: 5.9E-10
score: 39.4
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 62..243
score: 14.618
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 81..247
e-value: 1.9E-27
score: 97.8
NoneNo IPR availableGENE3D1.10.340.70coord: 5..60
e-value: 4.1E-8
score: 35.3
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 19..245
NoneNo IPR availablePANTHERPTHR24559:SF275coord: 19..245
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 19..60
e-value: 1.6E-9
score: 37.8
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 81..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26641contigH-paniculata_contig26641:2403..3143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26641.7280.1mRNA_H-paniculata_contig26641.7280.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26641 2403..3143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26641.7280.1 ID=prot_H-paniculata_contig26641.7280.1|Name=mRNA_H-paniculata_contig26641.7280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp
IPRNEHALQARLMVCAEMQEAGHRGVDATVNRLAAYCMWDEMEANVAEFV
RQCLHCLNVRSASRVPRSLGELLHGADVGGVLHFDLLHLGASDPLKEHEV
IRGGCPYLLVLLDDVNDHVWLEAALECTAKVAAATVLRWCTVFGAPGVFV
SNTARNVKNRLVSLLATALGAEHRFCVANSAWSNGTVERMNREVVNTFKA
VLNEADRPVSEWPVAVPVVQWALNPAHRARLGTTPHQLMFGRAPRTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR041588Integrase_H2C2
IPR012337RNaseH-like_sf