prot_H-paniculata_contig2664.7279.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2664.7279.1
Unique Nameprot_H-paniculata_contig2664.7279.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length264
Homology
BLAST of mRNA_H-paniculata_contig2664.7279.1 vs. uniprot
Match: D7G8V6_ECTSI (Rad51 homolog C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V6_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 6.880e-128
Identity = 190/221 (85.97%), Postives = 203/221 (91.86%), Query Frame = 0
Query:    1 MQLAVDVQIPNEFGGVGGEALYIDTEGSLTVERLSQLCAAVVEHLQKIARNKRRQGLAHLDAAVPTQEDFLGGVHVWRLHDHVEQLAAVRTLPSFLEVHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQQHSLAVVLVNQMTTKVVTGRAGESSLVPALGESWAHATTNRILLLWKGKYRFAELLKSPRLPNKTAPFTVAGVGIRDTPAS 221
            MQLAVDVQIP++FGGVGG ALYIDTEGSLTVERLSQLC+AVVEHLQKIARNKR+QG+  L++AVPTQE FLGG+HVWRLHDH EQLAAVRTLP FL  HPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQ HSLAVVLVNQMTTKV+TG  GESSLVPALGESWAHA TNR+LLLWKG+ RFAELLKSPRL  KT PF+V GVGIRDT +S
Sbjct:   75 MQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIARNKRKQGVPDLESAVPTQEAFLGGIHVWRLHDHAEQLAAVRTLPEFLVAHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQAHSLAVVLVNQMTTKVMTGHRGESSLVPALGESWAHAATNRLLLLWKGQERFAELLKSPRLRRKTVPFSVVGVGIRDTQSS 295          
BLAST of mRNA_H-paniculata_contig2664.7279.1 vs. uniprot
Match: A0A835ZD48_9STRA (Rad51-like protein c n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD48_9STRA)

HSP 1 Score: 229 bits (584), Expect = 8.780e-70
Identity = 128/237 (54.01%), Postives = 161/237 (67.93%), Query Frame = 0
Query:    1 MQLAVDVQIPNEFGGVGGEALYIDTEGSLTVERLSQLCAAVVEHLQKI-ARNKRRQGLAHLD-----AAVPTQEDFLGGVHVWRLHDHVEQLAAVRTLPSFLEVHP------------EVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQQHSLAVVLVNQMTTKVVTGRAGESSLVPALGESWAHATTNRILLLWKGKYRFAELLKSPRLPNKTAPFTVAGVGIRDTP 219
            MQLAVDVQIP  FGGVGGEA+YIDTEGS T ER++Q+  A+V HL ++ A ++++Q  A  +     AA+ T+E  L  +HV+R+HDH EQLAAVR LP+F+                    VV+DSVAFHFRHA  DM++R RML+ M QQLN++A++ SLAVVL NQMT +  +GR GE  LV ALG++WAHA TNR++L WK   RFA LLKS R    T PF V  VGIRD P
Sbjct:  141 MQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRDVP 377          
BLAST of mRNA_H-paniculata_contig2664.7279.1 vs. uniprot
Match: A0A6P4XU31_BRABE (DNA repair protein RAD51 homolog 3-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4XU31_BRABE)

HSP 1 Score: 219 bits (559), Expect = 2.160e-66
Identity = 116/219 (52.97%), Postives = 147/219 (67.12%), Query Frame = 0
Query:    1 MQLAVDVQIPNEFGGVGGEALYIDTEGSLTVERLSQLCAAVVEHLQKIA--RNKRRQGLAHLDAAVPTQEDFLGGVHVWRLHDHVEQLAAVRTLPSFLEVHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQQHSLAVVLVNQMTTKVVTGRAGESSLVPALGESWAHATTNRILLLWKGKYRFAELLKSPRLPNKTAPFTVAGVGIRD 217
            MQLA+DVQIP  FGG+GGEA+Y+DTEGS  V RL  +  A VEH + IA   N R Q  A  D  V   E  L  +H +R+HD VE +A +  LP FL+ HP+++LVVMDS+AF FRH F+D+S+RTR+L+ +AQ    +A  H  AVVLVNQMTTK+     G++ LVPALGESW HA+T R+LL W+  YR+A L KSP     T P+ V   GIRD
Sbjct:  124 MQLAIDVQIPCVFGGLGGEAVYVDTEGSFMVHRLEDMAKAAVEHCRHIATVENNREQLEAMSDFTV---EHILSRIHFYRVHDWVELVALINILPEFLQQHPKIRLVVMDSIAFPFRHDFEDLSLRTRLLNGLAQNCIRLADSHKAAVVLVNQMTTKMGHSGDGQAHLVPALGESWGHASTIRVLLFWEAGYRYARLYKSPTREEATVPYQVTMAGIRD 339          
BLAST of mRNA_H-paniculata_contig2664.7279.1 vs. uniprot
Match: A0A7S3UDT2_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UDT2_9CHLO)

HSP 1 Score: 213 bits (543), Expect = 2.950e-64
Identity = 115/216 (53.24%), Postives = 146/216 (67.59%), Query Frame = 0
Query:    1 MQLAVDVQIPNEFGGVGGEALYIDTEGSLTVERLSQLCAAVVEHLQKIARNKRRQGLAHLDAAVPTQEDFLGGVHVWRLHDHVEQLAAVRTLPSFLEVHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQQHSLAVVLVNQMTTKVVTGRAGESSLVPALGESWAHATTNRILLLWKGKYRFAELLKSPRLPNKTAPFTVAGVGIR 216
            MQLAVDVQIP EFGG+ G+A+YIDTEGS   ER  ++  A +EHLQKIA + +   L  L +     E  L  +H +R+HD  EQ+A V  LP FL  HPEV+LVV+DSVAFHFR  F+DM+ RTR+L+ M Q L  VA    +AVVL NQ+TTKV  G  G++ LVPALG+S+AHA+TNR+LL W    R A L KSP LP +T  + +   G+R
Sbjct:  133 MQLAVDVQIPQEFGGLAGQAVYIDTEGSFMAERAEEIADACLEHLQKIATSAQDADLLRLVSKWDV-EKMLANIHFFRVHDSTEQIALVHVLPEFLCAHPEVRLVVLDSVAFHFRQEFRDMAKRTRLLASMMQGLMNVANDSQVAVVLTNQVTTKVHGG--GDARLVPALGDSFAHASTNRVLLFWHECERHAHLYKSPYLPGRTVAYALTSQGVR 345          
BLAST of mRNA_H-paniculata_contig2664.7279.1 vs. uniprot
Match: A0A0P7V2U8_SCLFO (DNA repair protein RAD513-like n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7V2U8_SCLFO)

HSP 1 Score: 213 bits (543), Expect = 4.120e-64
Identity = 114/218 (52.29%), Postives = 150/218 (68.81%), Query Frame = 0
Query:    1 MQLAVDVQIPNEFGGVGGEALYIDTEGSLTVERLSQLCAAVVEHLQKIARN-KRRQGLAHLDAAVPTQEDFLGGVHVWRLHDHVEQLAAVRTLPSFLEVHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQQHSLAVVLVNQMTTKVVTGRAGESSLVPALGESWAHATTNRILLLWKGKYRFAELLKSPRLPNKTAPFTVAGVGIRD 217
            +QLAVDVQIP  FGG+GG A+YIDTEGS  V+R+  +  A V+H   +A + ++R+ L        T E  L  + ++R HD+VE LA +  LP FL  HPEV+LVV+DS+AF FRH F+D+S RTR+L+ +AQQL ++A QH++AVVL NQMTTKV  G   +S LVPALGESW HA T R++L W+G+ R A L KSP  P  T P+ + G G RD
Sbjct:  120 IQLAVDVQIPLCFGGLGGHAVYIDTEGSFLVQRVVDMAEAAVKHCSLLAEDTEQREALKGF-----TLETILSNLFLFRCHDYVELLAEIYLLPDFLAQHPEVRLVVIDSIAFPFRHDFEDLSQRTRLLNGLAQQLIQMATQHNIAVVLTNQMTTKVGNG---QSKLVPALGESWGHAATQRLILHWEGQQRLASLYKSPSHPEATVPYQITGEGFRD 329          
BLAST of mRNA_H-paniculata_contig2664.7279.1 vs. uniprot
Match: A0A1S3HA83_LINUN (DNA repair protein RAD51 homolog 3-like n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HA83_LINUN)

HSP 1 Score: 213 bits (541), Expect = 1.140e-63
Identity = 111/218 (50.92%), Postives = 149/218 (68.35%), Query Frame = 0
Query:    2 QLAVDVQIPNEFGGVGGEALYIDTEGSLTVERLSQLCAAVVEHLQKIA--RNKRRQGLAHLDAAVPTQEDFLGGVHVWRLHDHVEQLAAVRTLPSFLEVHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQQHSLAVVLVNQMTTKVVTGRAGESSLVPALGESWAHATTNRILLLWKGKYRFAELLKSPRLPNKTAPFTVAGVGIRD 217
            QL+VDVQIP  FGG+GGEA+YIDTEGS  V+RL  +  A VEH Q IA   N   Q  A  + +V   E  L G+H +R H++VE +A V  LP FL+ H +VKL+++DS+AFHFRH F D+++RTR+L+ M+Q    +A +H+LAVVL NQMTT+    + G+S L+PALGESW HA+T R++L W+   R+A+L KSP     T P+ V   GIRD
Sbjct:  130 QLSVDVQIPECFGGLGGEAVYIDTEGSFIVDRLIDVAKATVEHCQHIAAAENSAEQVEALKNFSV---ESILKGIHYYRCHNYVELIATVHLLPEFLKEHSQVKLIIVDSIAFHFRHDFDDLALRTRLLNGMSQSFIRLANEHTLAVVLTNQMTTRFSVDQQGQSYLIPALGESWGHASTVRVVLYWENSQRWAKLYKSPYRKEDTIPYQVTTGGIRD 344          
BLAST of mRNA_H-paniculata_contig2664.7279.1 vs. uniprot
Match: A0A7S3BQZ5_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BQZ5_9VIRI)

HSP 1 Score: 208 bits (530), Expect = 1.310e-63
Identity = 115/220 (52.27%), Postives = 147/220 (66.82%), Query Frame = 0
Query:    1 MQLAVDVQIPNEFGGVGGEALYIDTEGSLTVERLSQLCAAVVEHLQKIARNKRRQGLAHLDAAVPTQEDFLGGVHVWRLHDHVEQLAAVRTLPSFLEVHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQQHSLAVVLVNQMTTKVVTGRAG----ESSLVPALGESWAHATTNRILLLWKGKYRFAELLKSPRLPNKTAPFTVAGVGIR 216
            MQLA+DVQIP  FGG+GG A+YIDTEGS  VER+ Q+  AVV HLQ+I+  +    +A   A +    D L G+  +R H   EQ+AA+  L        +V+LVV+DS+AFHFR  F DM+ RTR+L+ +AQQL E+A++  LAVVLVNQ+TTKV   R      ++ LVPALGESWAHA TNRI+L W+G  R A L KSPRLP  TA + V   G+R
Sbjct:   16 MQLALDVQIPVAFGGLGGRAVYIDTEGSFMVERVEQMARAVVAHLQRISSVQHDARMAEAVATLDAN-DLLEGISYFRAHSATEQIAAINLLDELAREAHDVRLVVVDSIAFHFRQEFDDMARRTRVLNGLAQQLLELAERRGLAVVLVNQVTTKVQRTRGDGDEEDAKLVPALGESWAHACTNRIILHWEGDQRLAHLYKSPRLPTGTATYDVTADGVR 234          
BLAST of mRNA_H-paniculata_contig2664.7279.1 vs. uniprot
Match: UPI0016036942 (DNA repair protein RAD51 homolog 3-like isoform X1 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016036942)

HSP 1 Score: 212 bits (540), Expect = 1.410e-63
Identity = 113/219 (51.60%), Postives = 146/219 (66.67%), Query Frame = 0
Query:    1 MQLAVDVQIPNEFGGVGGEALYIDTEGSLTVERLSQLCAAVVEHLQKIA--RNKRRQGLAHLDAAVPTQEDFLGGVHVWRLHDHVEQLAAVRTLPSFLEVHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQQHSLAVVLVNQMTTKVVTGRAGESSLVPALGESWAHATTNRILLLWKGKYRFAELLKSPRLPNKTAPFTVAGVGIRD 217
            MQLA+DVQIP+ FGG+GGEA+YIDTEGS  V RL  +  A +EH + IA   N R Q  A  D  V   E  L  +H +R+HD VE +A +  LP FL+ H +V+LVV+DS+AF FRH F+D+S+RTR+L+ +AQ    +A  H  AVVLVNQMTTK+     G++ LVPALGESW HA+T R+LL W+   R+A L KSP     T P+ V   G+RD
Sbjct:  121 MQLAIDVQIPSAFGGLGGEAVYIDTEGSFMVHRLEDMAKAAMEHCRHIATVENNRDQLEAMADFTV---EHILSRIHFYRVHDWVELVALINILPEFLQEHSKVRLVVIDSIAFPFRHDFEDLSLRTRLLNGLAQNCIRLADSHKAAVVLVNQMTTKMGHAGDGQAHLVPALGESWGHASTIRVLLFWEAGCRYARLYKSPTREEATVPYQVTVAGVRD 336          
BLAST of mRNA_H-paniculata_contig2664.7279.1 vs. uniprot
Match: UPI00148A3B53 (DNA repair protein RAD51 homolog 3-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A3B53)

HSP 1 Score: 212 bits (539), Expect = 1.470e-63
Identity = 110/217 (50.69%), Postives = 147/217 (67.74%), Query Frame = 0
Query:    1 MQLAVDVQIPNEFGGVGGEALYIDTEGSLTVERLSQLCAAVVEHLQKIARNKRRQGLAHLDAAVPTQEDFLGGVHVWRLHDHVEQLAAVRTLPSFLEVHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQQHSLAVVLVNQMTTKVVTGRAGESSLVPALGESWAHATTNRILLLWKGKYRFAELLKSPRLPNKTAPFTVAGVGIRD 217
            MQ+AVDVQIP++FGG+ GEA+YIDTEGS  VERL  +  A V+H  ++AR      L        T E  L GVH +R HD+VE LA V  LP F++ HP++K+V++DSVAFHFRH F D+S+RTR+L+ MAQ   ++A +  +A+VL NQMTTK   G   +S LVPALGESW HA+T R++L W+G+ R+A L KSP       P+ +   G+RD
Sbjct:  126 MQIAVDVQIPSQFGGLQGEAVYIDTEGSFIVERLVDIAKATVDHCNEMAR------LEGFKEGEITVESVLSGVHFYRCHDYVELLATVHLLPEFIKKHPKIKVVLVDSVAFHFRHDFDDLSLRTRLLTTMAQSFIKLATEFKIAIVLTNQMTTKFSPGE--DSRLVPALGESWGHASTIRVILYWEGQKRWAWLYKSPSKKESRVPYQITMGGVRD 334          
BLAST of mRNA_H-paniculata_contig2664.7279.1 vs. uniprot
Match: A0A812D533_SEPPH (RAD51L2 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812D533_SEPPH)

HSP 1 Score: 209 bits (531), Expect = 1.560e-63
Identity = 112/217 (51.61%), Postives = 144/217 (66.36%), Query Frame = 0
Query:    1 MQLAVDVQIPNEFGGVGGEALYIDTEGSLTVERLSQLCAAVVEHLQKIARNKRRQGLAHLDAAVPTQEDFLGGVHVWRLHDHVEQLAAVRTLPSFLEVHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQQHSLAVVLVNQMTTKVVTGRAGESSLVPALGESWAHATTNRILLLWKGKYRFAELLKSPRLPNKTAPFTVAGVGIRD 217
            MQLAVDVQIP  FGGV GEA+YIDTEGS   ERL+ +    V+H Q++             ++V T E  L GVH +R  D+VE LA +  L  F++ +P+VKLV++DS+AFHFRH F+D+ +RTR+L+ +AQ L ++A QH LAVVL NQMTT+V       SSL+PALGESWAH +T RI+L W+ K R A L KSP     T PF +   GIRD
Sbjct:   27 MQLAVDVQIPECFGGVEGEAVYIDTEGSFLAERLADIAEVTVKHCQQLDTTGEV-------SSVFTTERVLSGVHYFRCRDYVELLATIHLLTDFIKDYPKVKLVIIDSIAFHFRHDFEDLGLRTRLLTTVAQNLIQIANQHKLAVVLTNQMTTRVSNQGDMASSLIPALGESWAHVSTIRIILFWEDKQRMALLYKSPDHKEDTVPFQITMGGIRD 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2664.7279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8V6_ECTSI6.880e-12885.97Rad51 homolog C n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A835ZD48_9STRA8.780e-7054.01Rad51-like protein c n=1 Tax=Tribonema minus TaxID... [more]
A0A6P4XU31_BRABE2.160e-6652.97DNA repair protein RAD51 homolog 3-like n=3 Tax=Br... [more]
A0A7S3UDT2_9CHLO2.950e-6453.24Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A0P7V2U8_SCLFO4.120e-6452.29DNA repair protein RAD513-like n=2 Tax=Scleropages... [more]
A0A1S3HA83_LINUN1.140e-6350.92DNA repair protein RAD51 homolog 3-like n=2 Tax=Li... [more]
A0A7S3BQZ5_9VIRI1.310e-6352.27Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
UPI00160369421.410e-6351.60DNA repair protein RAD51 homolog 3-like isoform X1... [more]
UPI00148A3B531.470e-6350.69DNA repair protein RAD51 homolog 3-like n=1 Tax=Cr... [more]
A0A812D533_SEPPH1.560e-6351.61RAD51L2 n=1 Tax=Sepia pharaonis TaxID=158019 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 1..217
e-value: 7.8E-29
score: 100.7
NoneNo IPR availableGENE3D3.40.50.300coord: 1..223
e-value: 1.3E-47
score: 164.4
NoneNo IPR availablePANTHERPTHR46239FAMILY NOT NAMEDcoord: 1..226
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 1..152
score: 28.718
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2664contigH-paniculata_contig2664:1476..9625 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2664.7279.1mRNA_H-paniculata_contig2664.7279.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2664 1435..10616 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2664.7279.1 ID=prot_H-paniculata_contig2664.7279.1|Name=mRNA_H-paniculata_contig2664.7279.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp
MQLAVDVQIPNEFGGVGGEALYIDTEGSLTVERLSQLCAAVVEHLQKIAR
NKRRQGLAHLDAAVPTQEDFLGGVHVWRLHDHVEQLAAVRTLPSFLEVHP
EVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQQHSLAVVLVN
QMTTKVVTGRAGESSLVPALGESWAHATTNRILLLWKGKYRFAELLKSPR
LPNKTAPFTVAGVGIRDTPASVSAAASARTGSGRSEKRASSGVSEREQEN
PPKRHEGPPPRGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase