prot_H-paniculata_contig26630.7276.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26630.7276.1
Unique Nameprot_H-paniculata_contig26630.7276.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length179
Homology
[Close]
BLAST of mRNA_H-paniculata_contig26630.7276.1 vs. uniprot
Match: A0A6H5KNC7_9PHAE (Centrosomal protein of 162 kDa (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNC7_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 9.930e-12
Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 0 
Query:  121 VLELRAAMANERRAAAAKDLEISENMRRRLEEEVLDLRAKLSKPSTPSQLKHMELSRKV 179
            VLEL AA+A ER+AAAAKDLE SE+MRR LE EVL LR KL++PSTPSQ K+M LS+KV
Sbjct:  579 VLELEAAVAKERQAAAAKDLERSEDMRRMLEAEVLGLRTKLNEPSTPSQAKYMNLSKKV 637
[Close]
BLAST of mRNA_H-paniculata_contig26630.7276.1 vs. uniprot
Match: D8LRE4_ECTSI (Centrosomal protein of 162 kDa n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE4_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.050e-8
Identity = 36/51 (70.59%), Postives = 44/51 (86.27%), Query Frame = 0 
Query:  129 ANERRAAAAKDLEISENMRRRLEEEVLDLRAKLSKPSTPSQLKHMELSRKV 179
            A ER+AAAAKDLE SE+MRR LE EVL LR +L++PSTPSQ K+M+LS+KV
Sbjct:  355 AKERQAAAAKDLERSEDMRRMLEAEVLGLRTRLNEPSTPSQAKYMDLSKKV 405
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26630.7276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNC7_9PHAE9.930e-1272.88Centrosomal protein of 162 kDa (Fragment) n=1 Tax=... [more]
D8LRE4_ECTSI1.050e-870.59Centrosomal protein of 162 kDa n=1 Tax=Ectocarpus ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..160
NoneNo IPR availableCOILSCoilCoilcoord: 10..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26630contigH-paniculata_contig26630:301..2584 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26630.7276.1mRNA_H-paniculata_contig26630.7276.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26630 301..2587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26630.7276.1 ID=prot_H-paniculata_contig26630.7276.1|Name=mRNA_H-paniculata_contig26630.7276.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp
MLRAERARHERELERERSAAEARIDGLKLRLLQTAQQALGKSQARDQAEA
WGRSKLPTNAHLPSSTPRPITTTITGNKNNNNYNVTRQQNSGVNVGGGGN
GGSGGGDRGSEAAERSEKVKVLELRAAMANERRAAAAKDLEISENMRRRL
EEEVLDLRAKLSKPSTPSQLKHMELSRKV
back to top