prot_H-paniculata_contig26621.7274.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26621.7274.1
Unique Nameprot_H-paniculata_contig26621.7274.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length99
Homology
BLAST of mRNA_H-paniculata_contig26621.7274.1 vs. uniprot
Match: L8H3I6_ACACA (Xpo1 domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H3I6_ACACA)

HSP 1 Score: 68.6 bits (166), Expect = 2.320e-11
Identity = 33/90 (36.67%), Postives = 52/90 (57.78%), Query Frame = 0
Query:    2 YLAASHASLPRWVYTKLGKALIDVGKTSWPNEDPNFISDLQQMASNHSTRVAGLELLTLTCEEFVRPDSPLPNLRKKELRACLVWAMPNV 91
            +L A +++LP +V TKL K  + VGK  +P+  P F + L  +A ++STRV GL ++T+ C+EF          R+KEL+      MP +
Sbjct:   96 FLRAHYSALPGFVGTKLAKVAVAVGKADYPHHFPEFFAYLLALARDNSTRVLGLSMITIACDEFADTRGQTSATRRKELKQLFQQQMPVI 185          
BLAST of mRNA_H-paniculata_contig26621.7274.1 vs. uniprot
Match: A0A8C6CB25_MONMO (Xpo1 domain-containing protein n=1 Tax=Monodon monoceros TaxID=40151 RepID=A0A8C6CB25_MONMO)

HSP 1 Score: 58.9 bits (141), Expect = 5.040e-8
Identity = 31/97 (31.96%), Postives = 53/97 (54.64%), Query Frame = 0
Query:    3 LAASHASLPRWVYTKLGKALIDVGKTSWPNEDPNFISDLQQMASNHSTRVAGLELLTLTCEEFVRPDSPLPNLRKKELRACLVWAMPNVLHVLAEVI 99
            L A H +LP +++ KL K ++D+G+  WP    +F +++ Q+  +  T   GL +L  T E+   P   L   RK+ELR  L+  +  VL +L  ++
Sbjct:   95 LLAHHKTLPYFIWNKLCKVIVDIGRQDWPMFYHDFFTNILQLIQSLVTTPLGLIILKTTSEDLACPAEDLRVARKEELRKLLLDQVQTVLGLLTGIL 191          
BLAST of mRNA_H-paniculata_contig26621.7274.1 vs. uniprot
Match: A0A8B8WII7_BALMU (LOW QUALITY PROTEIN: exportin-6-like n=1 Tax=Balaenoptera musculus TaxID=9771 RepID=A0A8B8WII7_BALMU)

HSP 1 Score: 57.0 bits (136), Expect = 2.670e-7
Identity = 31/97 (31.96%), Postives = 51/97 (52.58%), Query Frame = 0
Query:    3 LAASHASLPRWVYTKLGKALIDVGKTSWPNEDPNFISDLQQMASNHSTRVAGLELLTLTCEEFVRPDSPLPNLRKKELRACLVWAMPNVLHVLAEVI 99
            L A   +LP +++ KL K ++D+G+  WP    +F ++  Q+  +  T   GL +L  T EE   P   L   RK+ELR  L+  +  VL +L  ++
Sbjct:   95 LLAHRKTLPYFIWNKLCKVIVDIGRQDWPMFYHDFFTNTLQLIQSPVTTPLGLIMLKTTSEELACPGEDLSVARKEELRKLLLDQVQTVLGLLTGIL 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26621.7274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
L8H3I6_ACACA2.320e-1136.67Xpo1 domain-containing protein n=1 Tax=Acanthamoeb... [more]
A0A8C6CB25_MONMO5.040e-831.96Xpo1 domain-containing protein n=1 Tax=Monodon mon... [more]
A0A8B8WII7_BALMU2.670e-731.96LOW QUALITY PROTEIN: exportin-6-like n=1 Tax=Balae... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013598Exportin-1/Importin-beta-likePFAMPF08389Xpo1coord: 12..98
e-value: 8.4E-7
score: 29.2
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..99
e-value: 1.2E-13
score: 51.8
IPR040016Exportin-6PANTHERPTHR21452FAMILY NOT NAMEDcoord: 2..98
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 11..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26621contigH-paniculata_contig26621:2180..3233 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26621.7274.1mRNA_H-paniculata_contig26621.7274.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26621 2180..3233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26621.7274.1 ID=prot_H-paniculata_contig26621.7274.1|Name=mRNA_H-paniculata_contig26621.7274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
QYLAASHASLPRWVYTKLGKALIDVGKTSWPNEDPNFISDLQQMASNHST
RVAGLELLTLTCEEFVRPDSPLPNLRKKELRACLVWAMPNVLHVLAEVI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013598Exportin-1/Importin-b-like
IPR011989ARM-like
IPR040016XPO6
IPR016024ARM-type_fold