prot_H-paniculata_contig26599.7262.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26599.7262.1
Unique Nameprot_H-paniculata_contig26599.7262.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length196
Homology
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BLAST of mRNA_H-paniculata_contig26599.7262.1 vs. uniprot
Match: A0A151ITN2_9HYME (Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151ITN2_9HYME)

HSP 1 Score: 55.1 bits (131), Expect = 1.710e-5
Identity = 46/166 (27.71%), Postives = 76/166 (45.78%), Query Frame = 0 
Query:    7 QRDSPNVYCRRCGKRGHDLYAC-PQLIDEDACLAEAEIEIELEEALKVDLGADAFIASYIALTSTTGKEEVLPVDSEGLEYHEVGGMGIWICDNGATKHMTHDSDFLFDYQQCNG-HARLAGGNRLPIEGVGMLFLQFRFDSEVVLMKLTQVAFIPLLSHHLLSLG 170
            +R    + C  C K GH +  C  +  DED  +   E +   E   +      AF A  I       ++E+L      LE  +V     WI D+GA++HMTH S+++ + Q     H  L  G +  + G G +++Q   D + +   L  V ++P L+ +L S+G
Sbjct:  221 ERSKKEIECFYCHKLGHYIKDCRKKRRDEDQGIRSKEKQKNNESNTEA-----AFSAEVI-------EKEIL-----NLEVKDV-----WILDSGASRHMTHRSNWISNLQTYKDEHVSLGDGTKCKVHGRGTVYIQRLVDGQWLDGVLEDVLYVPDLNKNLFSVG 364
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26599.7262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A151ITN2_9HYME1.710e-527.71Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 15..30
score: 8.697

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26599contigH-paniculata_contig26599:2212..2799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26599.7262.1mRNA_H-paniculata_contig26599.7262.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26599 2212..2799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26599.7262.1 ID=prot_H-paniculata_contig26599.7262.1|Name=mRNA_H-paniculata_contig26599.7262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
RSKDHLQRDSPNVYCRRCGKRGHDLYACPQLIDEDACLAEAEIEIELEEA
LKVDLGADAFIASYIALTSTTGKEEVLPVDSEGLEYHEVGGMGIWICDNG
ATKHMTHDSDFLFDYQQCNGHARLAGGNRLPIEGVGMLFLQFRFDSEVVL
MKLTQVAFIPLLSHHLLSLGKFADFGHEYRCSREGLRINLKTGRVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC