prot_H-paniculata_contig2656.7253.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2656.7253.1
Unique Nameprot_H-paniculata_contig2656.7253.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length701
Homology
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BLAST of mRNA_H-paniculata_contig2656.7253.1 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 3.020e-26
Identity = 71/145 (48.97%), Postives = 90/145 (62.07%), Query Frame = 0 
Query:  564 GAASQMCPYCGDESGPNVAKHLEECYQQVTAVRNARLNSATMRPPSVEASAAAIQARRTSLGG-----------MALPPIVAGELAYATTVTRQLLQRRIAYAEFAALPDSGRFQLHRDLQGWMTSPSRLDLLHKELVRQRNAAV 697
            G  + MC YCG+E+GP V++HLE CY++ TA+RN RL  AT+RP         ++      GG           +++PP  A  L     + RQLL RRIAYA F +LPD  RFQLH DL+GW  SPSRLD L+KELVRQRNAA+
Sbjct: 1125 GVQNFMCVYCGEETGPWVSEHLERCYRKTTAMRNERLKHATLRP---------LRDNHFLQGGSRLGAASVTEPVSVPPSAA--LDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAI 1258
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BLAST of mRNA_H-paniculata_contig2656.7253.1 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 3.950e-26
Identity = 70/136 (51.47%), Postives = 88/136 (64.71%), Query Frame = 0 
Query:  564 GAASQMCPYCGDESGPNVAKHLEECYQQVTAVRNARLNSATMRP-PSVEASAAAIQARRTSLGG-MALPPIVAGELAYATTVTRQLLQRRIAYAEFAALPDSGRFQLHRDLQGWMTSPSRLDLLHKELVRQRNAAV 697
            G  +  C YCG+E+GP V++HLE CY++ TA+RN RL  AT+RP P         +    S+   ++LPP     L     + RQLL RRIAYA F +LPD  RFQLH DL+GW  SPSRLD L+KELVRQRNAA+
Sbjct: 1099 GVQNFTCVYCGEETGPRVSEHLERCYRKTTAMRNERLKHATLRPLPDNHFLQGGSRLGAASVTEPVSLPPSAC--LDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAI 1232
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2656.7253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQA3_ECTSI3.020e-2648.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L313_9PHAE3.950e-2651.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2656contigH-paniculata_contig2656:10234..16579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2656.7253.1mRNA_H-paniculata_contig2656.7253.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2656 10234..16579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2656.7253.1 ID=prot_H-paniculata_contig2656.7253.1|Name=mRNA_H-paniculata_contig2656.7253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=701bp
EGRERGQRLRANRSARKHRTQITRAARIASRPDVPALAGRNEEQLRVMVH
RKWRLWKRLIEIGAYWEKVSGSKNLSAVRDLPTLVPPSPGAATAVALAAR
SQAAAAAAAAAAVAARNQATAPAGATATAAATTTATAAAAAATAVSGAPS
DVTSARAGDSGQQQQPQQQPQDSSGQAAGTGAGVLAVMKSLAARHAREAR
AAGAVVSLAPSSSHRKEITPCIGADFVERQPLHRAPPACQPVDEKGSEEV
DDVGKSADASANIAAITGAAVSAENSVISRELSDTSNGAAASVEAQMTKP
ENCVGMANKEQTATATTGGGGGGGGAGGDASVSASSSRVAGETLASANTD
NNNSGRRSNTEDDSSAAHRTAAKDQSNAHLSNKGKNPTASKSTGASSSSR
SITTAAAITTGTGKRAISAASGEVKYDGEMEVDVGVEQYANAASAVEVPP
VTGQQQPQYTTPMAAAAIASNGAAAAPPTKRPRTNPVLAAVSLVAAPATP
AAAMAALTPAPAAVATASAVLVTPVVSAVAQGVQARQLGGGSRGMQASVE
ALQMQIDGVIERTGAASQMCPYCGDESGPNVAKHLEECYQQVTAVRNARL
NSATMRPPSVEASAAAIQARRTSLGGMALPPIVAGELAYATTVTRQLLQR
RIAYAEFAALPDSGRFQLHRDLQGWMTSPSRLDLLHKELVRQRNAAVRIR
*
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