prot_H-paniculata_contig2654.7248.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2654.7248.1
Unique Nameprot_H-paniculata_contig2654.7248.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length266
Homology
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BLAST of mRNA_H-paniculata_contig2654.7248.1 vs. uniprot
Match: A0A6H5JD75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD75_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 3.840e-26
Identity = 58/85 (68.24%), Postives = 72/85 (84.71%), Query Frame = 0 
Query:    1 MLRSRETLAVLLGLSKARVIDIHRGVASRLYLSFVEGKLERKWSLDATDDASLKAMEEALGMTRVVCKELLARGKKMFLRRKLEE 85
            +L+ R++LA+ LGLSKAR ID+HRG +SRLYL F+ GKLERKW+LDA D ASLKAMEE LGMT VVC+EL+ RG K F+RR++EE
Sbjct:  951 VLQKRDSLALALGLSKARTIDVHRGASSRLYLDFLHGKLERKWALDAVDIASLKAMEEVLGMTGVVCEELMVRGTKSFVRRRVEE 1035
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BLAST of mRNA_H-paniculata_contig2654.7248.1 vs. uniprot
Match: D7G576_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G576_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 5.200e-26
Identity = 58/85 (68.24%), Postives = 73/85 (85.88%), Query Frame = 0 
Query:    1 MLRSRETLAVLLGLSKARVIDIHRGVASRLYLSFVEGKLERKWSLDATDDASLKAMEEALGMTRVVCKELLARGKKMFLRRKLEE 85
            +L+ R++LA+ LGLSKAR ID+HRGV+SRLYL F+ GKLERKW+L A D ASLKA+EE LGMT VVC+EL+ARG K F+RR++EE
Sbjct:  960 VLQKRDSLALALGLSKARTIDVHRGVSSRLYLDFLHGKLERKWALGAVDTASLKAIEEVLGMTGVVCEELMARGTKSFVRRRVEE 1044
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2654.7248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JD75_9PHAE3.840e-2668.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G576_ECTSI5.200e-2668.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2654contigH-paniculata_contig2654:11820..20335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2654.7248.1mRNA_H-paniculata_contig2654.7248.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2654 11316..20358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2654.7248.1 ID=prot_H-paniculata_contig2654.7248.1|Name=mRNA_H-paniculata_contig2654.7248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=266bp
MLRSRETLAVLLGLSKARVIDIHRGVASRLYLSFVEGKLERKWSLDATDD
ASLKAMEEALGMTRVVCKELLARGKKMFLRRKLEEKGRRGLDDSTFVQRL
RQCAVNLGISLRDDLGLPEERRRRMFYAEAQAIALEEGLEATNARAAVEK
ICTSLCLPEGAVYDLYAEVRDMSSPSSSSPLPSPLPSSSSSSAHQEVEQQ
GTVLDIDNNVGALNGIGDNTNNGQSVGGSLTNSGATAPTTITTTGGGDIA
GVPGASPPPTTIISE*
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