prot_H-paniculata_contig2653.7242.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2653.7242.1
Unique Nameprot_H-paniculata_contig2653.7242.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length434
Homology
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BLAST of mRNA_H-paniculata_contig2653.7242.1 vs. uniprot
Match: A0A6H5JFE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE0_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 5.510e-5
Identity = 47/114 (41.23%), Postives = 52/114 (45.61%), Query Frame = 0 
Query:  137 SLHLAYAKRGIDPRSCDLDLPPGLTPISPPPTGGGXGMGGMG-----------------VHPGSMPAAGMLPGLGNRRLTPELPPRMPS--------------SAAGRKRPRLG 219
            SLHLAY +RGIDPRSCDLDLPPGL P+   P+ GG    G                   + PG    AG L GLG        PP  PS              S AG+KR RLG
Sbjct:  179 SLHLAYQERGIDPRSCDLDLPPGLVPL---PSIGGRSRSGSXXXXXXXXXXXXXGPSRLLPPGG---AGHLAGLGLXXXXGRSPPVSPSLHQRMGLGDDMVLLSTAGKKRGRLG 286
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2653.7242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFE0_9PHAE5.510e-541.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2653contigH-paniculata_contig2653:6644..16160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2653.7242.1mRNA_H-paniculata_contig2653.7242.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2653 6215..16160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2653.7242.1 ID=prot_H-paniculata_contig2653.7242.1|Name=mRNA_H-paniculata_contig2653.7242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=434bp
MCSKLGCYKRPHYGNPGGKAIFCVTHKEPAMVNIHGRRCSHEDCDKQPTF
GRKGQKALYCSGHREPEMVDVVYKRCEFAGGCEKHPHFGKEGEKARFCGR
HKMDGMVNVKHRRCQQPGCRRERQFTDDPNSKPLYCSLHLAYAKRGIDPR
SCDLDLPPGLTPISPPPTGGGGGMGGMGVHPGSMPAAGMLPGLGNRRLTP
ELPPRMPSSAAGRKRPRLGVDHAGDGTEISNAVQQMQHQQVQQMQQQQHR
HHQQQQQQNQRGRLYDLHSHSRQVAAPPATAYLPPAPPVPPNAAYDRGFG
LGGHGDGPGFSGISGYRGGASSMASSSGFVDTPISGLSQRSAPFSTVGGS
GGGGGGDSGGMSGSGNGLGGSSSSSHRASGHLSSSLPTTSSAWPAVGRGG
SNVSVNMTTGGSGGASSGGGSSGVGSIGGGGGGG
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