prot_H-paniculata_contig2651.7238.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2651.7238.1
Unique Nameprot_H-paniculata_contig2651.7238.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length824
Homology
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BLAST of mRNA_H-paniculata_contig2651.7238.1 vs. uniprot
Match: D8LD72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD72_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 2.880e-28
Identity = 219/610 (35.90%), Postives = 262/610 (42.95%), Query Frame = 0 
Query:  297 STVSRSSCGSRSLSRVPMVRVGGINWCLPRAELLKPGFQWPERVKSLTFWALFDESLEGIAFPDGXXXXXXXXXFKESLDRGRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLAGKVSVGGSTGGKETISLPCGLRELHLGGVFNQSLAGVEWPVGLQKLVFSDKFNCPLRGDVGDGIEGSGNCAGAXXXXXXXXXXXXXGPAFNQDISQAQXXXXXXXXXXXXXXX-WPLHGREVGGPVGAGVGGRAAALEYGRNNKSYLPPGLKELELGNDFSGHLSVMHLPRGLESLQCGPQYHLPSSIPTSEWPPGLTRLVGLRGFSYIGFPPSLEILRMDHAFDSSLHGATFPARLRVLDLGENFSHPL-----------------------------------------------------------------VNDAALPDGLEELCLGEAFKGDIETVDWRLPRGLKRLIFSERSGFNKAVDYIDWPPHLEVLAFGNMFDQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGP-----------------NYSKRHVRNLSWPSRMRCMKVGPERFACEEAMARWAAPPPF 823
            ST+  +   +R+ +RVP+VR  GI W LP  ELL+ GF WP  VK L F A FDE +  + FP+          F ESL  GR+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+PL G    GG  G      LP  LRE+HLGGVFNQ L GVEWP  L+KL  S+ FN  L    GDG          XXXXXXXXXXXXX            XXXXXXXXXXXXXX   PL G E                         LP GL++L +G  FS  +S +  P  L  L+   ++    ++       G +R    R    +  P  LE L     F+S+L   + PA LRVL LG  F++PL                                                                 V    LP GLEEL LG AF  ++E    RLP  LKRL+F   S F++ V  + W               P                                                         Y   HVR L WP  +R + VG  RF   + +A+WAA PPF
Sbjct:  169 STLPATPTPARATTRVPLVRAVGIIWQLPALELLEAGFGWPRGVKELHFGAKFDEKVNAVEFPETLEALTFGYWFNESLGPGRVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPLRG----GGGIG------LPPRLREVHLGGVFNQPLDGVEWPASLEKLTLSEYFNQSLG--YGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNHPLAGGE-------------------------LPDGLEKLVIGQSFS-FVSSVRWPAELRRLELSCRWG--DALFAGSLGGGGSRRQR-RPSCCLSLPKRLEYLDAGDGFNSALDTVSLPASLRVLILGSAFNYPLDHANSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPVPPPLLPGGLEELRLGAAFNRELEAA--RLPERLKRLVFVAESKFDRPVAGVRWXXXXXXXXXXXXXXXPMESGIGDFDGLGSGGGGDSALMLPATLRELHFGWAFSHSLQGLALPRGLRRLSFFARYPVSHVRGLEWPPSLRSIHVGSFRFGSRKDVAKWAAQPPF 735
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2651.7238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD72_ECTSI2.880e-2835.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 560..803
e-value: 7.0E-6
score: 26.7
IPR008615FNIPPFAMPF05725FNIPcoord: 718..759
e-value: 2.4E-5
score: 24.4
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 447..687
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 335..614
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 566..787
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 335..614
coord: 447..687
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 566..787
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 442..783

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2651contigH-paniculata_contig2651:666..6894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2651.7238.1mRNA_H-paniculata_contig2651.7238.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2651 512..7412 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2651.7238.1 ID=prot_H-paniculata_contig2651.7238.1|Name=mRNA_H-paniculata_contig2651.7238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=824bp
MRGEVDMRCQNPSWSSAHDALAILTEAGWLPFSQVRHLELTCLFLCRESR
RQVARKVRVKEETPRSLWASLHRKLDGDHSTNSGRNSGEAVTLRSVPTAA
VAASLGNFFKDKTGLLLRPPDADGSPLLGEGGAVAEGGGGGTRKGKQRKA
ASSYNTNDSRVIEVDSLSALCDYESGDSDDSQQGGSEATGRENIDGSVGN
MASRRGREVACSEGGITAVIGDVDGSISGPAESSISSISPLAESDLPWLT
ANLCNSPIETSSATRITGGGGGGGGNSASKRRALLNQNIPKGDIGPSTVS
RSSCGSRSLSRVPMVRVGGINWCLPRAELLKPGFQWPERVKSLTFWALFD
ESLEGIAFPDGLEELTFGFRFKESLDRGRISWPKGLKKLTFGARWNRHLL
SARETWPASLEVLRFGTAFDRPLAGKVSVGGSTGGKETISLPCGLRELHL
GGVFNQSLAGVEWPVGLQKLVFSDKFNCPLRGDVGDGIEGSGNCAGAGLR
WPERLREISFGPAFNQDISQAQWPDSLEVLRFGKSFNWPLHGREVGGPVG
AGVGGRAAALEYGRNNKSYLPPGLKELELGNDFSGHLSVMHLPRGLESLQ
CGPQYHLPSSIPTSEWPPGLTRLVGLRGFSYIGFPPSLEILRMDHAFDSS
LHGATFPARLRVLDLGENFSHPLVNDAALPDGLEELCLGEAFKGDIETVD
WRLPRGLKRLIFSERSGFNKAVDYIDWPPHLEVLAFGNMFDQPLDFSRLP
DGLKELRFGWRFSYPLQAIKLPQGLQRLTLGPNYSKRHVRNLSWPSRMRC
MKVGPERFACEEAMARWAAPPPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP