prot_H-paniculata_contig26355.7198.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26355.7198.1
Unique Nameprot_H-paniculata_contig26355.7198.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length232
Homology
BLAST of mRNA_H-paniculata_contig26355.7198.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 6.740e-52
Identity = 107/233 (45.92%), Postives = 144/233 (61.80%), Query Frame = 0
Query:    1 MLMTKDEETRESAAALESAIEEARTEGLPPNKVTELRNIVTNSHFHAFRRALGGDPPADVEPLRVHVPANARAARERPRPMSRDKAEWLDGHFTKLAQAGMVFANPQARFSSVVMAMPKKD----TYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLYATSYFQGTMGDVLAGLLGKICEVWVDDI 229
            M+MT  EE    A AL+ A++ A   GL P  +  LR +V +  F+ FRR + GDPPA+V P+ V +   A+  + R R  + DK +WL      L   G+V+ N QA ++S +M  PK+     TYR V D+RAVN  I  S  PMP+LE   + ++ A+ + +LD+LQGYW MPL P+AQEIFTM+   G+Y+P RVPQGVL ATSY+QGTM  +L  L    C VWVDDI
Sbjct:  587 MVMTPAEEEAGRADALDRAVDSAADAGLSPWGLDRLRQVV-DRRFNVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDI 815          
BLAST of mRNA_H-paniculata_contig26355.7198.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 2.390e-49
Identity = 108/230 (46.96%), Postives = 140/230 (60.87%), Query Frame = 0
Query:    1 MLMTKDEETRESAAALESAIEEARTEGLPPNKVTELRNIVTNSHFHAFRRALG-GDPPADVEPLRVHVPANARAARERPRPMSRDKAEWLDGHFTKLAQAGMVFANPQARFSSVVMAMPKKDTYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLYATSYFQGTMGDVLAGLLGKICEVWVDDI 229
            M M+ +EE    +A+L+SA+  A   GL    V  LR I++   ++AFRR L  GDPPA+VEPLRV +   AR  + RPR  +  K  WL G        G+VF N QA ++S  MA PKK  YR+V+D+RA N  +      MPN E     ++ A  + +LDLLQ YWQ PL P+AQEIFT+ T  G+YTP RVPQG+L ATSYFQ T+  +L GL    C VWVDD+
Sbjct:  695 MDMSPEEEASARSASLDSAVSSAAAAGLEEPHVGRLRGIISE-RWNAFRRGLRHGDPPANVEPLRVTLKPGARPVKARPRVYNPIKTAWLAG-------LGLVFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDV 913          
BLAST of mRNA_H-paniculata_contig26355.7198.1 vs. uniprot
Match: A0A6H5JCK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK9_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.750e-44
Identity = 98/228 (42.98%), Postives = 133/228 (58.33%), Query Frame = 0
Query:    3 MTKDEETRESAAALESAIEEARTEGLPPNKVTELRNIVTNSHFHAFRRALG-GDPPADVEPLRVHVPANARAARERPRPMSRDKAEWLDGHFTKLAQAGMVFANPQARFSSVVMAMPKKDTYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLYATSYFQGTMGDVLAGLLGKICEVWVDDI 229
            M+ +EE    +A+L+SA+  A   GL    V  LR+I+    ++AFR  +  GDPPA+VEPLRV +   A   + RPR  +  K  WL G        G+VF N QA  +S  MA PKK  YR+++D+RA NN +      MPN E      +      +LDLL+ Y Q PL P+AQ+IFT+ T +G++TP RVPQG+L ATSYFQ T+  +L GL    C VWVD +
Sbjct:  471 MSPEEEASARSASLDSAVSSAVVAGLDEPHVGRLRSII-RERWNAFRPGMRPGDPPANVEPLRVTLKPGALPVKARPRTYNPIKTAWLAGCMASPVVLGLVFLNMQAVSASAAMATPKKGGYRLLSDFRAANNQVEKVPGVMPNPEASMAQFSATKFHGSLDLLRAYCQRPLSPEAQKIFTIATPRGLHTPKRVPQGILNATSYFQATLSRILEGLN---CLVWVDGV 694          
BLAST of mRNA_H-paniculata_contig26355.7198.1 vs. uniprot
Match: A0A6A3GM82_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GM82_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.220e-40
Identity = 88/221 (39.82%), Postives = 120/221 (54.30%), Query Frame = 0
Query:   16 LESAIEEARTEGLPPNKVTELRNIVTNSHFHAFRRALGGDPPADVEPLRVHVPANARAARERPRPMSRDKAEWLDGHFTKLAQAGMVFANPQARFSSVVMAMPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLYATSYFQGTMGDVLAGLLGKICEVWVDDI 229
            L+S +  AR +GL    V  LR I+      +FR   G DPP  V PL+V V  NA+  + +PR  S D   +LD H  KL + G+VF N ++R++S    + KK+         RM  D R VN        PMP LE +   + GA V  ALD  +GYWQ+PL   +QE+FT +T +G+YTPTRVP G   A +Y QG + ++   LLG     W+DDI
Sbjct:   37 LDSKLAAARAKGLSAKGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVTVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTESMPWPMPVLEVVLGALEGAKVVFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILAWLDDI 256          
BLAST of mRNA_H-paniculata_contig26355.7198.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.800e-39
Identity = 88/221 (39.82%), Postives = 121/221 (54.75%), Query Frame = 0
Query:   16 LESAIEEARTEGLPPNKVTELRNIVTNSHFHAFRRALGGDPPADVEPLRVHVPANARAARERPRPMSRDKAEWLDGHFTKLAQAGMVFANPQARFSSVVMAMPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLYATSYFQGTMGDVLAGLLGKICEVWVDDI 229
            L+S +  AR +GL    V  LR I+      +FR   G DPP  V PL+V V  NA+  + +PR  S +   +LD H  KL + G+V  N ++R++S    + KK+         RM  D R VN        PMP LE +   + GA VF ALD  +GYWQ+PL   +QE+FT +T +G+YTPTRVP G   A +Y QG + ++   LLG    VW+DDI
Sbjct:  396 LDSKLAAARAKGLSAKGVKRLREILLRRQ-DSFRLEFGSDPPVKVAPLQVRVKVNAQPTKAQPRRYSSNDKAFLDRHTAKLQEFGLVSLNHRSRWASAPRIVRKKEQGSDPTADPRMTIDTRGVNERTEAMPWPMPVLEVVLSALEGAQVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILVWLDDI 615          
BLAST of mRNA_H-paniculata_contig26355.7198.1 vs. uniprot
Match: A0A6A3VFD8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VFD8_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.150e-39
Identity = 88/221 (39.82%), Postives = 120/221 (54.30%), Query Frame = 0
Query:   16 LESAIEEARTEGLPPNKVTELRNIVTNSHFHAFRRALGGDPPADVEPLRVHVPANARAARERPRPMSRDKAEWLDGHFTKLAQAGMVFANPQARFSSVVMAMPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLYATSYFQGTMGDVLAGLLGKICEVWVDDI 229
            L+S +  AR +GL    V  LR I+      +FR   G DPP  V PL+V V  NA+  + +PR  S D   +LD H  KL + G+VF N ++R++S    + KK+         RM  D R VN        PMP LE +   + GA VF ALD  +GYWQ+PL   +QE+FT +T +G+YTPTRVP G   A +Y QG + ++    LG     W+DDI
Sbjct:  439 LDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDI 658          
BLAST of mRNA_H-paniculata_contig26355.7198.1 vs. uniprot
Match: A0A6G0MLJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MLJ8_9STRA)

HSP 1 Score: 153 bits (386), Expect = 6.290e-39
Identity = 88/221 (39.82%), Postives = 120/221 (54.30%), Query Frame = 0
Query:   16 LESAIEEARTEGLPPNKVTELRNIVTNSHFHAFRRALGGDPPADVEPLRVHVPANARAARERPRPMSRDKAEWLDGHFTKLAQAGMVFANPQARFSSVVMAMPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLYATSYFQGTMGDVLAGLLGKICEVWVDDI 229
            L+S +  AR +GL    V  LR I+      +FR   G DPP  V PL+V V  NA+  + +PR  S D   +LD H  KL + G+VF N ++R++S    + KK+         RM  D R VN        PMP LE +   + GA VF ALD  +GYWQ+PL   +QE+FT +T +G+YTPTRVP G   A +Y QG + ++    LG     W+DDI
Sbjct:  304 LDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDI 523          
BLAST of mRNA_H-paniculata_contig26355.7198.1 vs. uniprot
Match: A0A6A3Q7S3_9STRA (Uncharacterized protein n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q7S3_9STRA)

HSP 1 Score: 153 bits (386), Expect = 6.640e-39
Identity = 88/221 (39.82%), Postives = 120/221 (54.30%), Query Frame = 0
Query:   16 LESAIEEARTEGLPPNKVTELRNIVTNSHFHAFRRALGGDPPADVEPLRVHVPANARAARERPRPMSRDKAEWLDGHFTKLAQAGMVFANPQARFSSVVMAMPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLYATSYFQGTMGDVLAGLLGKICEVWVDDI 229
            L+S +  AR +GL    V  LR I+      +FR   G DPP  V PL+V V  NA+  + +PR  S D   +LD H  KL + G+VF N ++R++S    + KK+         RM  D R VN        PMP LE +   + GA VF ALD  +GYWQ+PL   +QE+FT +T +G+YTPTRVP G   A +Y QG + ++    LG     W+DDI
Sbjct:  439 LDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDI 658          
BLAST of mRNA_H-paniculata_contig26355.7198.1 vs. uniprot
Match: A0A6A3YWA9_9STRA (Reverse transcriptase domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YWA9_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.600e-38
Identity = 86/221 (38.91%), Postives = 120/221 (54.30%), Query Frame = 0
Query:   16 LESAIEEARTEGLPPNKVTELRNIVTNSHFHAFRRALGGDPPADVEPLRVHVPANARAARERPRPMSRDKAEWLDGHFTKLAQAGMVFANPQARFSSVVMAMPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLYATSYFQGTMGDVLAGLLGKICEVWVDDI 229
            L+S +  AR +GL    V  LR I+      +FR     DPP  V PL+V V  NA+  + +PR  S D   +LD H  KL + G+VF N ++R++S    + KK+         RM  D R VN        P+P LE +   + GA V  A+D  +GYWQ+PL   +QE+FT +T +G+YTPTRVP G   A +Y QG + ++  GLLG     W+DDI
Sbjct:  475 LDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFESDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAYLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTESMPWPIPVLEVVLGALEGAKVVFAMDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGGLLGNGILAWLDDI 694          
BLAST of mRNA_H-paniculata_contig26355.7198.1 vs. uniprot
Match: A0A6G0NWQ3_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NWQ3_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.990e-38
Identity = 80/204 (39.22%), Postives = 111/204 (54.41%), Query Frame = 0
Query:   33 VTELRNIVTNSHFHAFRRALGGDPPADVEPLRVHVPANARAARERPRPMSRDKAEWLDGHFTKLAQAGMVFANPQARFSSVVMAMPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLYATSYFQGTMGDVLAGLLGKICEVWVDDI 229
            V  LR I+      +FR     DPP  V PL+V V  NA+  + +PR  S D   +LD H  KL + G+VF N ++R++S    + KK+         RM  D R VN        P+P LE +   + GA V  A+D  +GYWQ+PL   +QE+FT +T +G+YTPTRVP G   A +Y QG + ++  GLLG     W+DDI
Sbjct:   19 VKRLREILLRRQ-DSFRLEFESDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAYLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTESMPWPIPVLEVVLGALEGAKVVFAMDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGGLLGNGILAWLDDI 221          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26355.7198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE6.740e-5245.92Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE2.390e-4946.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCK9_9PHAE1.750e-4442.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3GM82_9STRA1.220e-4039.82Reverse transcriptase domain-containing protein (F... [more]
A0A2P4WWJ1_9STRA1.800e-3939.82Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6A3VFD8_9STRA3.150e-3939.82Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6G0MLJ8_9STRA6.290e-3939.82Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3Q7S3_9STRA6.640e-3939.82Uncharacterized protein n=6 Tax=Phytophthora fraga... [more]
A0A6A3YWA9_9STRA1.600e-3838.91Reverse transcriptase domain-containing protein n=... [more]
A0A6G0NWQ3_9STRA1.990e-3839.22Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
NoneNo IPR availableGENE3D3.10.10.10coord: 65..201
e-value: 5.5E-34
score: 119.4
NoneNo IPR availableGENE3D3.30.70.270coord: 141..231
e-value: 5.5E-34
score: 119.4
NoneNo IPR availablePANTHERPTHR24559:SF299coord: 110..229
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 110..229
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 44..230
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 98..231
score: 12.155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26355contigH-paniculata_contig26355:2197..2892 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26355.7198.1mRNA_H-paniculata_contig26355.7198.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26355 2191..2892 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26355.7198.1 ID=prot_H-paniculata_contig26355.7198.1|Name=mRNA_H-paniculata_contig26355.7198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
MLMTKDEETRESAAALESAIEEARTEGLPPNKVTELRNIVTNSHFHAFRR
ALGGDPPADVEPLRVHVPANARAARERPRPMSRDKAEWLDGHFTKLAQAG
MVFANPQARFSSVVMAMPKKDTYRMVADYRAVNNLIAPSAMPMPNLEEIG
RGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVL
YATSYFQGTMGDVLAGLLGKICEVWVDDIGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom