prot_H-paniculata_contig26333.7193.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26333.7193.1
Unique Nameprot_H-paniculata_contig26333.7193.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length200
Homology
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BLAST of mRNA_H-paniculata_contig26333.7193.1 vs. uniprot
Match: A0A6H5KGL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL2_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 4.180e-54
Identity = 97/126 (76.98%), Postives = 106/126 (84.13%), Query Frame = 0 
Query:    3 AWRGSDDDGGSIPGRILFVSVGFYGHAMPLLALAEEVALRGHNVTFGTHNRLRSLVESTPGVEFLSAGRMPMHDYQLRGKFKSLSQTGGFWGLLTLLNDVYLPLSRPMYRALLAAVSLPPPSVPPT 128
            AWR    DG  +PGRILFVSVGFYGHAMPLL+LAEE+A RGHNVTF THN LR +V+ TPGV FLSAGRMPMHD+ LR K +SLSQ GGFWGLLTLLNDVYLPL+RPMYRALL+AV LPP   PPT
Sbjct:   55 AWR----DGRPVPGRILFVSVGFYGHAMPLLSLAEEIAARGHNVTFATHNCLRPMVDETPGVAFLSAGRMPMHDHHLRSKLRSLSQAGGFWGLLTLLNDVYLPLARPMYRALLSAVQLPPS--PPT 174
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26333.7193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGL2_9PHAE4.180e-5476.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004276Glycosyltransferase family 28, N-terminal domainPFAMPF03033Glyco_transf_28coord: 18..74
e-value: 2.2E-7
score: 31.0
NoneNo IPR availableGENE3D3.40.50.2000coord: 17..137
e-value: 8.9E-14
score: 53.9
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 17..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26333contigH-paniculata_contig26333:155..2266 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26333.7193.1mRNA_H-paniculata_contig26333.7193.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26333 153..2266 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26333.7193.1 ID=prot_H-paniculata_contig26333.7193.1|Name=mRNA_H-paniculata_contig26333.7193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=200bp
SNAWRGSDDDGGSIPGRILFVSVGFYGHAMPLLALAEEVALRGHNVTFGT
HNRLRSLVESTPGVEFLSAGRMPMHDYQLRGKFKSLSQTGGFWGLLTLLN
DVYLPLSRPMYRALLAAVSLPPPSVPPTPAPVPPHSTRSQASSSSGGGGS
GDGEERGDSGGVNKEERAFQFAYSNVGNGGGRGGSSDGSGERGPRHAQGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004276GlycoTrans_28_N