prot_H-paniculata_contig2617.7150.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2617.7150.1
Unique Nameprot_H-paniculata_contig2617.7150.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length772
Homology
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BLAST of mRNA_H-paniculata_contig2617.7150.1 vs. uniprot
Match: A0A6H5KE12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE12_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 7.580e-10
Identity = 82/303 (27.06%), Postives = 118/303 (38.94%), Query Frame = 0 
Query:  483 GDVEGEKRKSMEMSSLPAASAQWEDSV---RGRRNTLLVSTPTGDGGTSDLSLWVTTRRGRQAVGASSSPDSVLLPLGWSGGAPLSAENGLGSGSDEEKLLSGIALDDHGGKTSPSTHLSPSGTCNSSFGYLKFPVVVGNDPWIVPRNGAFGESPPKSSFCDNSINIGGDHSYLN-LDAESEATEYAGSGKESN---VTCAGEGFLVDMQPQEYQRVATEGDND-----------ELENAELAPLMSDAPVFDAA-ALQREWTESAGCVMVAEAGAVKGWGEMWQEISRALCGLFDFCNPPAR 766
            G+    +R    +SS P++           RG    L VSTPTG+G +SDLSLWVTTR      G+                +PL +                           PS  LSP          +    +  +DP I P +GA   +  +    +  +  G      N ++A S   E   SG+E N   V   GE     +QP E    A EG  D           E+ENA   P  +D P+ D++  +     E+A  V   E G ++G    W+ ++R  CG+F+FC PP R
Sbjct:  472 GEAPAGRRDRAALSSSPSSVCSEGGGTGPPRGGEVKLFVSTPTGEGDSSDLSLWVTTR------GSXXXXXXXXXXXXXXXXSPLPSP--------------------------PSVRLSP----------VAVKSLEDDDPGIDPGDGASTAANLEEEDLEKDLRNGLGFGAKNAIEARSGDGEAGASGEEENEVEVLPEGEATCCLLQPSEGPEAAEEGGGDNEDPEPAVSQGEVENAAEGPSRADVPLLDSSKTIPSTTAETAANVEKTEVGGMEG---PWEAVARVFCGIFNFCRPPRR 729
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2617.7150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KE12_9PHAE7.580e-1027.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2617contigH-paniculata_contig2617:10823..17302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2617.7150.1mRNA_H-paniculata_contig2617.7150.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2617 10810..19191 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2617.7150.1 ID=prot_H-paniculata_contig2617.7150.1|Name=mRNA_H-paniculata_contig2617.7150.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=772bp
MRGVRQQRPGFGSRNTSGHTDPPSAASSSPGRAVFGSTAASAAAAATAGV
HREWISSSVSPTRARRRQITRGFMSPRLTVVRRSRSRTVGSDTIASASSL
PIIVGRQQSSSPERTTPEKKPPCVSNDSPERTGNSNDSRGRENVCDVSEM
YEFLDTTRSAGGRKTFDEASGAGDRDSITTFAGTVVEESDTMVEQDKDED
VDEDADEVRSSVSSCPTSTYSDLAPPSPQSHQLSPYSQARTSTNTDFVLR
ELEGGPARGHLSPYSQARTSTNNDLARPDLNEIPSRGQLSPFSQARTSTN
TDLARPELNEIPSRGPLSPYSQARTSTNADLAPPELNEGPSHSHLSPFSQ
ALISTNVDFSPPELEEGLDRRSTGSRPPCHGQFRSIGGGEEHVDDWSPFS
EGEVATAIAVPVESRGIVSSAAAMEEEIYEELSLTVDEAAKQQSISHAPP
GVCVDAHVEEVTHSTPRADEKGAEVVGGGDGGGDVEGEKRKSMEMSSLPA
ASAQWEDSVRGRRNTLLVSTPTGDGGTSDLSLWVTTRRGRQAVGASSSPD
SVLLPLGWSGGAPLSAENGLGSGSDEEKLLSGIALDDHGGKTSPSTHLSP
SGTCNSSFGYLKFPVVVGNDPWIVPRNGAFGESPPKSSFCDNSINIGGDH
SYLNLDAESEATEYAGSGKESNVTCAGEGFLVDMQPQEYQRVATEGDNDE
LENAELAPLMSDAPVFDAAALQREWTESAGCVMVAEAGAVKGWGEMWQEI
SRALCGLFDFCNPPARTVREE*
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