prot_H-paniculata_contig25611.6975.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25611.6975.1
Unique Nameprot_H-paniculata_contig25611.6975.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length245
Homology
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 4.090e-50
Identity = 82/161 (50.93%), Postives = 117/161 (72.67%), Query Frame = 0
Query:    1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTGT 161
            ++G+ +PIV++YTYLG+ F   LDV   MG++     KLV  + P+L C  I +P+K AV++GV++PRLLFGAE++GM+  IT+++Q ++N+  R+  GM PK+TVSSVALWR++ +PPICA AAAR AR +QK S LKTWI  +    ++HR W W TGT
Sbjct:  813 LAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGT 973          
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A2R5FKX6_9STRA (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FKX6_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.160e-29
Identity = 62/163 (38.04%), Postives = 95/163 (58.28%), Query Frame = 0
Query:    1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSM-LKTWINVMEGVEFRHRSWAWMTGTR 162
            + G  +PIV++YTYLG+  R DL    ++ DR  KAR+L  S++ FLR + + +  + AV + V+IP + +GAEI+   +  T   Q F+N  L+L  G+     VS+VALW + G+PP+CA A  + AR L K    L+TW+  M    ++ R   W+T  R
Sbjct:  192 LQGAAVPIVESYTYLGLEIRPDLSRQGTIADRLAKARRLAGSMHSFLRRQDVPIQFRTAVARTVLIPAITYGAEIFAFNKSFTRGAQQFINTQLKLIAGVARGQAVSNVALWHEFGVPPLCATANGQRARLLSKGGRELRTWLAKMVERGYKARRTTWITNAR 354          
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A1J5WJX7_9MICR (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WJX7_9MICR)

HSP 1 Score: 117 bits (294), Expect = 1.850e-26
Identity = 85/253 (33.60%), Postives = 126/253 (49.80%), Query Frame = 0
Query:    1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWI-NVMEGVEFRHRSWAWMTG--TRNRGITNLVWQREEGLRMTASRTRYREAGYGK-----RRLTALRATTSPTLAAGLTFIVKCRVGGFWSAESLAKRKMAPERYLRECPCC 245
            + G  +   ++YTYLG+     L + K    R  K    +A L   LR   + +  KA +I+G+VIP + +GAE YG    IT ++Q   N  L++  G    +  S  A+ RD+G+PPI A A     RAL+K   LKT +  ++   +   + W   T   T+N+   + VW+  EG     S  RY+E  + K     R+LTAL     PTL  G   +++ R G  W+ E  A+R +A E  L ECPCC
Sbjct:  709 VQGKDVVAGESYTYLGIMLDETLSLKKMALGRKKKGVGALALLEKSLRGTVLPIEYKALLIRGLVIPAMSYGAEAYGSTAAITWELQKVANIALKIISG----NECSLTAVRRDLGIPPIQATAVGAQNRALKKFPTLKTEVARILNNGKTDVKCWLGRTREETKNKRTKDGVWRFLEGKEKAKSWKRYKENNFEKTSKLFRQLTAL----EPTLQKGWKAVLQIRTGHLWTCERAARRGVADEWLLTECPCC 953          
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A1J5WU32_9MICR (Reverse transcriptase domain-containing protein n=2 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WU32_9MICR)

HSP 1 Score: 116 bits (290), Expect = 4.550e-26
Identity = 81/249 (32.53%), Postives = 123/249 (49.40%), Query Frame = 0
Query:    3 GDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTGTRNRGIT-----NLVWQREEGLRMTASRTRYREAG-YGKRRLTALRATTSPTLAAGLTFIVKCRVGGFWSAESLAKRKMAPERYLRECPCC 245
            G  IP  D+YTYLG+    +L        R  K  + +  L   LR  ++S+  K  ++KG+++P +L+GAE+YG   K T   Q  +N+ LR+  G G   T    A+WRD+G+ P+ A AA+R  RA  K   L+T +      + +H  + W +G  NR +      N  W+  EG   T +  RY+E G Y  R      A+T P +  G   +++ R GG W+    A+  +A E  L  CP C
Sbjct:  264 GGTIPEPDSYTYLGVELDRNLSRKTMSERRRKKGLECLFMLEKNLRSPSLSIGHKTLLVKGILMPTMLYGAEVYGSIGKTTSGAQVVVNKALRMVAGNGGALT----AVWRDLGVIPVQAAAASRQRRAWLKFPTLRT-VGSRVATKDKHLPYGW-SGRTNREVKRRPDKNSTWEMLEGKDGTGAWKRYQELGLYHSREQFRWLASTRPDVRRGWKKVLQLRTGGLWAGLFAARIGIAKEELLVRCPSC 506          
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A7S3PFX4_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PFX4_9STRA)

HSP 1 Score: 111 bits (277), Expect = 5.510e-25
Identity = 51/127 (40.16%), Postives = 80/127 (62.99%), Query Frame = 0
Query:   35 KARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTGT 161
            K R+  A++ PFL C  I + I+  ++  V++ RLL+GAEIYGM + +T   Q  L+++L++ +G+ PK  VS + LW + G+PPI A+AA+R AR  QK   L+T I  +    +R   W W++GT
Sbjct:    8 KGRQTQAAIRPFLGCLDIPLCIRRQILCSVMLSRLLYGAEIYGMNKSLTRHFQQLLDESLKIMLGVSPKMPVSKLVLWEEFGIPPIAALAASRRARVFQKAQNLRTKITTLIQSPYRSLQWTWISGT 134          
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM)

HSP 1 Score: 100 bits (250), Expect = 1.350e-20
Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 0
Query:    1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQG-FLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTG 160
            + G P+P+V+ Y YLG      LD+ +S+  R  +A+K + S+ PFL C +I + I++ V   +V P  L+GAE++G++   T  I   F N   R+A       T +   L R++ +PP+ A+AAAR  RA  K   LKTW++ +     R R   W+TG
Sbjct: 1009 LQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIA------GTYTGT-LARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTG 1162          
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A1J5WUS4_9MICR (Reverse transcriptase domain-containing protein n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WUS4_9MICR)

HSP 1 Score: 99.8 bits (247), Expect = 3.200e-20
Identity = 81/254 (31.89%), Postives = 123/254 (48.43%), Query Frame = 0
Query:    1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKT-WINVME-GVEFRHRSWAWMTGTRNRGITN-----LVWQREEGLRMTASRTRYREAGYGK--RRLTALRATTSPTLAAGLTFIVKCRVGGFWSAESLAKRKMAPERYLRECPCC 245
            I   PIP V +YTYLG+    +L     +  R  K  + V  L   LR  ++++  K  ++KG+VIP +L+GAE+YG   + T  +Q  +N+ L++  G    +  +  A+ RD+G+ PI A AA R  RA  K   L+T   +V + G       W   TG   R +         W+  E    TAS  RY+  G G+  ++   L A+T   L  G   +++ R G  ++  + AKR  A E  LR CP C
Sbjct:  692 IGEGPIPEVKSYTYLGVELDQNLTRKAVVEKRRKKGEECVFMLEKQLRSPSLTIGHKTLLVKGIVIPTMLYGAEVYGSTGEATRGMQTVVNKALKMVAG----NCCALTAVRRDLGMMPIQAAAAGRQERAWAKFPNLRTIGASVFDRGGTTTTNGW---TGRTKRELKTRPGRCATWEMMERKDGTASWKRYKRLGLGESSKKFRWL-ASTRANLHIGWKRVLQLRTGNLYTGHTAAKRGAAEETLLRMCPSC 937          
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A1J5WVJ6_9MICR (Reverse transcriptase domain-containing protein n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WVJ6_9MICR)

HSP 1 Score: 78.2 bits (191), Expect = 5.530e-13
Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 0
Query:    3 GDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTGTRNRGI 166
            G  IP  D+YTYLG+    +L        R  K  + +  L   LR  ++S+  K  ++KG+++P +L+GAE+YG   K T   Q  +N+ +R+  G G   T    A+ RD+G+ P+ A AA+R  RA  K   ++T +      + +H  + W +G  NR +
Sbjct:  264 GGTIPEPDSYTYLGVELDRNLSRKTMSERRRKKGLECLFMLEKNLRSPSLSIGHKTLLVKGILMPTVLYGAEVYGSIGKTTSGAQVVVNKAVRMIAGNGGALT----AVRRDLGVIPVQAAAASRQRRAWLKFPTVRT-VGSRVATKDKHLPYGW-SGRTNREV 421          
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A507CUH4_9FUNG (Reverse transcriptase domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CUH4_9FUNG)

HSP 1 Score: 77.0 bits (188), Expect = 1.870e-12
Identity = 66/234 (28.21%), Postives = 112/234 (47.86%), Query Frame = 0
Query:    1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKIT-DQIQGFLNQTLRLAMGMGPKSTVSSVALWR-DMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTGT-RN----RGITNLV---WQREEGLRMTASRTRYREAGYGKRRLTALRATTSPTLAAGLTFIVKCRVGGFWS 224
            + G+P+P+V+TY YLG+    +  +   +  R  K +K    L  FLR E+I + I+ A  +  VIP L++ +E++G   K+  +++       ++   G+   S ++S+   R ++GL  +   A    ARA  K   LKTWI  +        SW   + T RN     GIT+      +R+  L+ T S  +Y  AG+ K R      +      +G   ++KCRVG  ++
Sbjct:  548 MQGNPVPVVNTYQYLGIPVNTEWKLKDVIEQRAEKGKKAYWGLAHFLRSESIPLEIRIATCRASVIPVLMYASELWGTAAKVEIEELDRVHAMGVKSLAGLRLSSNLTSLECLRTELGLRSVTEKARLAVARAEVKYPTLKTWIAKLALARRTKNSWFSRSKTIRNTAEQEGITDTSANKMKRKLALK-TLSMQKYSGAGFEKTREYIQILSRGLGYPSGTQALLKCRVGAVFT 780          
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A1J5X0W1_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5X0W1_9MICR)

HSP 1 Score: 72.4 bits (176), Expect = 5.350e-12
Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 0
Query:    5 PIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKT 140
            PIP +++YTYLG+     L        R  K  + +  L   LR  ++ +  K  +I+G+V+P + +GAEI+G    +T   QG +N  +++  G     T    A+ RD+G+ P+ A+AA R  RA  K   LKT
Sbjct:   47 PIPDLESYTYLGVEITKTLSRMAMAERRRKKGLECLFMLEKKLRSPSLPIGHKTLLIRGIVMPTVTYGAEIFGSTGVVTKGSQGVINLAMKMVAGRNCALT----AVRRDLGILPVQAIAAERQKRAWGKFPYLKT 178          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE4.090e-5050.93Reverse transcriptase domain-containing protein n=... [more]
A0A2R5FKX6_9STRA4.160e-2938.04Retrovirus-related Pol polyprotein from type-1 ret... [more]
A0A1J5WJX7_9MICR1.850e-2633.60Reverse transcriptase domain-containing protein (F... [more]
A0A1J5WU32_9MICR4.550e-2632.53Reverse transcriptase domain-containing protein n=... [more]
A0A7S3PFX4_9STRA5.510e-2540.16Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]
A0A3M2C3P5_9GAMM1.350e-2035.40Reverse transcriptase domain-containing protein n=... [more]
A0A1J5WUS4_9MICR3.200e-2031.89Reverse transcriptase domain-containing protein n=... [more]
A0A1J5WVJ6_9MICR5.530e-1331.71Reverse transcriptase domain-containing protein n=... [more]
A0A507CUH4_9FUNG1.870e-1228.21Reverse transcriptase domain-containing protein n=... [more]
A0A1J5X0W1_9MICR5.350e-1233.09Uncharacterized protein (Fragment) n=1 Tax=Amphiam... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47027:SF5coord: 1..134
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 1..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25611contigH-paniculata_contig25611:959..1804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25611.6975.1mRNA_H-paniculata_contig25611.6975.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25611 959..1804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25611.6975.1 ID=prot_H-paniculata_contig25611.6975.1|Name=mRNA_H-paniculata_contig25611.6975.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp
ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCE
TISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGM
GPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEF
RHRSWAWMTGTRNRGITNLVWQREEGLRMTASRTRYREAGYGKRRLTALR
ATTSPTLAAGLTFIVKCRVGGFWSAESLAKRKMAPERYLRECPCC
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