prot_H-paniculata_contig25460.6937.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25460.6937.1
Unique Nameprot_H-paniculata_contig25460.6937.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
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BLAST of mRNA_H-paniculata_contig25460.6937.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 1.350e-6
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 0 
Query:    6 FHMQMALHPSTADLVYVDQLCTTAVRATEVKNKIASKVVSLTVTLGQRAA 55
            F MQMALHP+TADL YVD+L +T+  A  VK+ I  KV+SL V L + AA
Sbjct:  264 FDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAA 313
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BLAST of mRNA_H-paniculata_contig25460.6937.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 8.990e-6
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0 
Query:    6 FHMQMALHPSTADLVYVDQLCTTAVRATEVKNKIASKVVSLTVTLGQR 53
            F MQM LHP+TADL YVD+L +T V A  VK  I  K+++L V L ++
Sbjct:  404 FDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEK 451
[Close]
BLAST of mRNA_H-paniculata_contig25460.6937.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 4.950e-5
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0 
Query:    6 FHMQMALHPSTADLVYVDQLCTTAVRATEVKNKIASKVVSLTVTLGQRAA 55
            F MQMALHP+TA L YV++L +T+  A  VK+ I  KV+ LTV L + AA
Sbjct:   26 FDMQMALHPTTAGLRYVEKLASTSAFAGAVKSTITDKVIFLTVRLAEAAA 75
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25460.6937.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JNY1_9PHAE1.350e-658.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LBK4_ECTSI8.990e-652.08Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JML0_9PHAE4.950e-554.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25460contigH-paniculata_contig25460:2187..2417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25460.6937.1mRNA_H-paniculata_contig25460.6937.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25460 2070..2417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25460.6937.1 ID=prot_H-paniculata_contig25460.6937.1|Name=mRNA_H-paniculata_contig25460.6937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
MKTRTFHMQMALHPSTADLVYVDQLCTTAVRATEVKNKIASKVVSLTVTL
GQRAADDDDVGGSEVPAKRKAAAALGT
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