prot_H-paniculata_contig2546.6935.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2546.6935.1
Unique Nameprot_H-paniculata_contig2546.6935.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length196
Homology
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BLAST of mRNA_H-paniculata_contig2546.6935.1 vs. uniprot
Match: D8LRB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB3_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 1.880e-72
Identity = 118/188 (62.77%), Postives = 148/188 (78.72%), Query Frame = 0 
Query:    2 LHTDRSTQNLREVHSRLLSFIAAHSALSKATLGLADSIVEFYSPEDDGFAPAVAFQTMAAEGTSGLLCAQIQALVQAAVRPLARFAAEVGEVDTLIKVCKEAGQRSQHYAKKVKDLNTKLETEKREDRQVLLEEKVTRNNAKLAAAHRQRKEVSDKVYRLVDNSLQSRYQCFNPVFASICQFQEATYR 189
            L T+  TQ+LREVH RL+SF+  H+ L+ +T+GLADSI++FYSPED GFAPAVAFQT+AAEG SGLLCAQ+QALVQ  +RPLARF AE+GE+DTL K C+   +   HYAKKV +LN KLE E+RED++ +L+EK  RN  KLAAA   RK+ S+++ RLV  S QS + C +PVFASICQFQEA+YR
Sbjct:    4 LQTEGHTQSLREVHERLVSFVQCHTQLASSTIGLADSILDFYSPEDAGFAPAVAFQTVAAEGVSGLLCAQLQALVQTTLRPLARFTAELGEMDTLSKACQRKRESEHHYAKKVNELNGKLEAERREDKRAVLQEKAARNIRKLAAARTVRKQASEELSRLVVISHQSSHDCLDPVFASICQFQEASYR 191
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BLAST of mRNA_H-paniculata_contig2546.6935.1 vs. uniprot
Match: A0A6H5J8H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H8_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 6.850e-46
Identity = 90/144 (62.50%), Postives = 113/144 (78.47%), Query Frame = 0 
Query:   46 EDDGFAPAVAFQTMAAEGTSGLLCAQIQALVQAAVRPLARFAAEVGEVDTLIKVCKEAGQRSQHYAKKVKDLNTKLETEKREDRQVLLEEKVTRNNAKLAAAHRQRKEVSDKVYRLVDNSLQSRYQCFNPVFASICQFQEATYR 189
            +D GFAPAVAFQT+AAEG SGLLCAQ+QALVQ A+RPLARF AE+GE+DTL K C+   +   HYAKKV +LN+KLE E+RED++ +L+EK  RN  KLAA      + S+++ RLV +S QS + CF+PVFASICQFQEA+YR
Sbjct:   31 QDAGFAPAVAFQTVAAEGVSGLLCAQLQALVQTALRPLARFTAELGEMDTLFKACQRKRESEHHYAKKVNELNSKLEAERREDKRAVLQEKAARNIRKLAAXXXXXXQASEELSRLVVSSHQSSHDCFDPVFASICQFQEASYR 174
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BLAST of mRNA_H-paniculata_contig2546.6935.1 vs. uniprot
Match: A0A6H5JB03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB03_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.760e-9
Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 0 
Query:    2 LHTDRSTQNLREVHSRLLSFIAAHSALSKATLGLADSIVEFYSPE 46
            L T+  TQ+LREVH RL+SF+  H+ L+ +T+GLADSI++FYSPE
Sbjct:    4 LQTEGHTQSLREVHERLVSFVQCHTQLASSTIGLADSILDFYSPE 48
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2546.6935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRB3_ECTSI1.880e-7262.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8H8_9PHAE6.850e-4662.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB03_9PHAE1.760e-960.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 4..190
e-value: 4.0E-13
score: 51.1
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 13..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2546contigH-paniculata_contig2546:176..6847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2546.6935.1mRNA_H-paniculata_contig2546.6935.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2546 176..6859 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2546.6935.1 ID=prot_H-paniculata_contig2546.6935.1|Name=mRNA_H-paniculata_contig2546.6935.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
MLHTDRSTQNLREVHSRLLSFIAAHSALSKATLGLADSIVEFYSPEDDGF
APAVAFQTMAAEGTSGLLCAQIQALVQAAVRPLARFAAEVGEVDTLIKVC
KEAGQRSQHYAKKVKDLNTKLETEKREDRQVLLEEKVTRNNAKLAAAHRQ
RKEVSDKVYRLVDNSLQSRYQCFNPVFASICQFQEATYRCDVRKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf