prot_H-paniculata_contig25344.6899.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25344.6899.1
Unique Nameprot_H-paniculata_contig25344.6899.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length44
Homology
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BLAST of mRNA_H-paniculata_contig25344.6899.1 vs. uniprot
Match: A0A6H5L1V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V0_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 5.300e-15
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:    1 NDCSVCDNLTRAQEEALATYDNGGKRVVCDPTCVDGVSDPSHCN 44
            ++CSVC NLT  Q   LA+YDNGGK+VVCDPTC+DGV+DP HCN
Sbjct:   13 DECSVCSNLTDEQVAILASYDNGGKQVVCDPTCLDGVTDPLHCN 56
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BLAST of mRNA_H-paniculata_contig25344.6899.1 vs. uniprot
Match: D7FTU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU6_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 8.520e-15
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:    1 NDCSVCDNLTRAQEEALATYDNGGKRVVCDPTCVDGVSDPSHCN 44
            ++CSVC NLT  Q   LA+YDNGGK+VVCDPTC+DGV+DP HCN
Sbjct: 1016 DECSVCSNLTDEQVAVLASYDNGGKQVVCDPTCLDGVTDPLHCN 1059
[Close]
BLAST of mRNA_H-paniculata_contig25344.6899.1 vs. uniprot
Match: A0A6H5L314_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L314_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.170e-14
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:    1 NDCSVCDNLTRAQEEALATYDNGGKRVVCDPTCVDGVSDPSHCN 44
            ++CSVC NLT  Q   LA+YDNGGK+VVCDPTC+DGV+DP HCN
Sbjct:  429 DECSVCSNLTDEQVAILASYDNGGKQVVCDPTCLDGVTDPLHCN 472
[Close]
BLAST of mRNA_H-paniculata_contig25344.6899.1 vs. uniprot
Match: A0A6H5KP86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP86_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 2.000e-5
Identity = 19/28 (67.86%), Postives = 24/28 (85.71%), Query Frame = 0 
Query:    2 DCSVCDNLTRAQEEALATYDNGGKRVVC 29
            DC+ C +L+ AQ EALA+YDNGGKRV+C
Sbjct:  493 DCAACSSLSNAQVEALASYDNGGKRVIC 520
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25344.6899.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L1V0_9PHAE5.300e-1570.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTU6_ECTSI8.520e-1570.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L314_9PHAE1.170e-1470.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP86_9PHAE2.000e-567.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25344contigH-paniculata_contig25344:2481..2612 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25344.6899.1mRNA_H-paniculata_contig25344.6899.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25344 2481..2612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25344.6899.1 ID=prot_H-paniculata_contig25344.6899.1|Name=mRNA_H-paniculata_contig25344.6899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=44bp
NDCSVCDNLTRAQEEALATYDNGGKRVVCDPTCVDGVSDPSHCN
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