prot_H-paniculata_contig25227.6871.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25227.6871.1
Unique Nameprot_H-paniculata_contig25227.6871.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length107
Homology
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BLAST of mRNA_H-paniculata_contig25227.6871.1 vs. uniprot
Match: D8LR47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR47_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 2.670e-20
Identity = 48/94 (51.06%), Postives = 61/94 (64.89%), Query Frame = 0 
Query:   16 LATEVPLVAAEGPPSATMRFMEQVHGHYRASED-DR--EAQQLYVSKRALVEDRACRRLHKTPHAIAGLWPPWFISTADLAEGFWSTEVAALSC 106
            LA  + + + +  PSA MRFME +HG    S+  DR  E  QLYVSKRA VEDRAC RL +TPH I      WF +  ++AEGF+S +VAAL+C
Sbjct:    7 LAAGIVVGSVQASPSAPMRFMEHLHGSGVDSQSPDRGGEGLQLYVSKRAWVEDRACTRLSRTPHLITTSQSTWFPTAVEMAEGFYSADVAALAC 100
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25227.6871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LR47_ECTSI2.670e-2051.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..106
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.88
NoneNo IPR availableTMHMMTMhelixcoord: 2..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25227contigH-paniculata_contig25227:1484..2944 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25227.6871.1mRNA_H-paniculata_contig25227.6871.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25227 1208..3290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25227.6871.1 ID=prot_H-paniculata_contig25227.6871.1|Name=mRNA_H-paniculata_contig25227.6871.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
MAVGWWCMLVAFLIGLATEVPLVAAEGPPSATMRFMEQVHGHYRASEDDR
EAQQLYVSKRALVEDRACRRLHKTPHAIAGLWPPWFISTADLAEGFWSTE
VAALSC*
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