prot_H-paniculata_contig2522.6869.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig2522.6869.1
Unique Name	prot_H-paniculata_contig2522.6869.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	443

Homology

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BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot
Match: A0A6H5KBB7_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB7_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 2.760e-50
Identity = 116/259 (44.79%), Postives = 159/259 (61.39%), Query Frame = 0

Query:   43 LDSTGDIRDQATESDQREANVQLSYVSDDVFVALAHRRMDPRAAVFTGRLSIRGDMALAARLGDWMYTVVARRAAAGSELQVVARNRWEKDHEAAACAVCHQPFSKVYRRKHHCRFCGRVVCNSCSEQKISGQKACKLCKGRAD-VARLKSQQTLAKDSAAGRPGRTGESASVAPAELEFLQTRVVELEEQVETLDRRAFAARAVLLRQGVLALYRGLALFCLALALLSAHLVAGWLSRGFGPTLFEASVQVPRLSSLS 300
            LD+ G    +A+  +   A + L+Y S++VF+ LAH R+ PRAA+ TG+L  RG+M+L  +LG W+   +A +AA     Q V R +WEKD +   CAVC + F+ V R +HHCRFCGRVVC  CS  K+ GQ+AC  C  R D VA  K    LA+ +   R  R              LQTRV+ELEE+++ +D+RAF+ARA +LR  +L +YR ++L  LA+ LLSAHL A  LSR FGP +FEA+      S+LS
Sbjct:   46 LDTAGKYT-EASPPEVLRARLHLTYASEEVFLGLAHERIGPRAAMLTGKLKFRGEMSLGIKLGHWIRKAMALQAATPDRPQAVDRGKWEKDEDVKRCAVCRRDFT-VLRWRHHCRFCGRVVCEDCSAAKVDGQRACDSCLSRTDPVATEKPSANLAEGAGGFRRDRQKLQQQDEGEAARELQTRVLELEEEIDHIDKRAFSARARVLRHLMLMVYRLISLGLLAMVLLSAHLSATLLSRQFGPKIFEANKVTVDASALS 302

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BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot
Match: A0A7S2V858_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V858_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 5.980e-9
Identity = 47/143 (32.87%), Postives = 69/143 (48.25%), Query Frame = 0

Query:   65 LSYVSDDVFVALAHRRMDPRAAVFTGRLSIRGDMALAARLGDWM-----------------YTVVARRAAAGSEL----QVVARNRWEKDHEAAACAVCHQPFSKVYRRKHHCRFCGRVVCNSCSEQK--ISGQKACKLCKGR 184
            L+Y S +VF  LA +++ P  A    +L I+G+MA    L   M                 Y++ +  +AA   +    + V R  W  D  +  C VC   FS   RR HHCRFCG VVC+ CS ++  + G++AC+ C  R
Sbjct:   99 LTYESGEVFQLLAAKKLSPHKAFLRRKLLIQGNMAKMRFLRQLMERGHQEAAQKQRQRSVSYSICSSSSAAPIAVPWIPETVPRRNWVPDGLSHQCHVCLSAFSFTLRR-HHCRFCGGVVCDGCSGRRFWLGGRRACRPCSQR 240

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BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot
Match: K3X1X4_GLOUD (FYVE-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1X4_GLOUD)

HSP 1 Score: 68.6 bits (166), Expect = 1.150e-8
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 0

Query:  120 SELQVVARNRWEKDHEAAACAVCHQPFSKVYRRKHHCRFCGRVVCNSCSEQK---------ISGQKACKLCKGRADV 187
            S+ +V+A+N+W K+ E  AC +C + F+ +YRR+HHCR CG V+C SCS  +         +   + C LC  +  V
Sbjct:  269 SDQEVLAQNQWVKNEERVACVICWKQFNALYRRRHHCRICGDVICGSCSSMRRTSAVSKKDVDKVRICHLCSNKGRV 345

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BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot
Match: A0A7S0K532_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K532_CAFRO)

HSP 1 Score: 62.4 bits (150), Expect = 1.860e-8
Identity = 29/66 (43.94%), Postives = 37/66 (56.06%), Query Frame = 0

Query:  114 RRAAAGSELQVVARNR---WEKDHEAAACAVCHQPFSKVYRRKHHCRFCGRVVCNSCSEQKISGQK 176
            R  AA   + +  R R   W  D  A+AC  C  PF   +RR+HHCRFCGR+ CN+CS  +  G K
Sbjct:    2 RSQAASMSIPLTTRGRGGDWMPDESASACTQCGAPFG-WFRRRHHCRFCGRIFCNACSSHRFDGSK 66

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BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot
Match: H3GSH1_PHYRM (FYVE-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSH1_PHYRM)

HSP 1 Score: 67.4 bits (163), Expect = 2.520e-8
Identity = 36/113 (31.86%), Postives = 61/113 (53.98%), Query Frame = 0

Query:  121 ELQVVARNRWEKDHEAAACAVCHQPFSKVYRRKHHCRFCGRVVCNSCSE-----------QKISGQKACKLCKGRADVARLKSQ-QTLAKDSAAGRPGRTGESASVAPAELEF 221
            + Q+VA ++W K+ E A+C +C + F+ ++RR+HHCR CG V+C SCS            +++   + C LC  +A   RL+S     +    + R  R+ +     PA+LE+
Sbjct:  288 DCQLVAPHQWVKNEERASCVICWKRFNAIFRRRHHCRLCGEVICGSCSSLRSINIVSVKTKEVQKTRICHLCNHKA---RLQSNTHAFSSKKHSSRAPRSRQDREAHPAQLEY 397

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BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot
Match: A0A1W0A7K2_9STRA (Radial spoke head protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7K2_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.280e-8
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0

Query:  130 WEKDHEAAACAVCHQPFSKVYRRKHHCRFCGRVVCNSCSEQK--ISG--QKACKLC 181
            W  + ++A C +CH+PF    +RKHHCR CGR+VCNSCS+ +  + G  Q+ CKLC
Sbjct:   22 WMPNDQSAQCVICHEPFHIWIKRKHHCRLCGRLVCNSCSKHRAVVHGISQRTCKLC 77

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BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot
Match: A0A6G0LE08_9STRA (FYVE-type domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0LE08_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 8.700e-8
Identity = 34/102 (33.33%), Postives = 54/102 (52.94%), Query Frame = 0

Query:   67 YVSDDVFVALAHRRMDPRAAVFTGRLSIRGDMALAARLGDWMYTVVARRAAAGSELQVVARNRWEKDHEAAACAVCHQPFSKVYRRKHHCRFCGRVVCNSCS 168
            Y  D V +++A +R  P  ++F    ++     LA  L D +      +     E+ VV  + W KD E   C +C++ FS ++RR+HHCR CG V+C +CS
Sbjct:  255 YKDDFVTISIAFQRPPPMVSLFRSNPAVEMVTQLARGLRDLLEDPPELQ-----EISVVKTSAWVKDKERRFCVLCNRRFSPIFRRRHHCRTCGEVICWACS 351

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BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot
Match: A0A6A3LR08_9STRA (FYVE-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LR08_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 9.920e-8
Identity = 34/102 (33.33%), Postives = 54/102 (52.94%), Query Frame = 0

Query:   67 YVSDDVFVALAHRRMDPRAAVFTGRLSIRGDMALAARLGDWMYTVVARRAAAGSELQVVARNRWEKDHEAAACAVCHQPFSKVYRRKHHCRFCGRVVCNSCS 168
            Y  D V +++A +R  P  ++F    ++     LA  L D +      +     E+ VV  + W KD E   C +C++ FS ++RR+HHCR CG V+C +CS
Sbjct:  255 YKDDFVTISIAFQRPPPMVSLFRSNPAVEMVTQLARGLRDLLEDPPELQ-----EISVVKTSAWVKDKERRFCVLCNRRFSPIFRRRHHCRTCGEVICWACS 351

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BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot
Match: W2R4E4_PHYPN (FYVE-type domain-containing protein n=36 Tax=Phytophthora TaxID=4783 RepID=W2R4E4_PHYPN)

HSP 1 Score: 65.9 bits (159), Expect = 1.010e-7
Identity = 34/102 (33.33%), Postives = 54/102 (52.94%), Query Frame = 0

Query:   67 YVSDDVFVALAHRRMDPRAAVFTGRLSIRGDMALAARLGDWMYTVVARRAAAGSELQVVARNRWEKDHEAAACAVCHQPFSKVYRRKHHCRFCGRVVCNSCS 168
            Y  D V +++A +R  P  ++F    ++     LA  L D +      +     E+ VV  + W KD E   C +C++ FS ++RR+HHCR CG V+C +CS
Sbjct:  262 YKDDFVTISIAFQRPPPMVSLFRSNPAVEMVTQLARGLRDLLEDPPELQ-----EISVVKTSAWVKDKERRFCVLCNKRFSPIFRRRHHCRTCGEVICWACS 358

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BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot
Match: D0MZ17_PHYIT (DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MZ17_PHYIT)

HSP 1 Score: 65.9 bits (159), Expect = 1.140e-7
Identity = 34/102 (33.33%), Postives = 54/102 (52.94%), Query Frame = 0

Query:   67 YVSDDVFVALAHRRMDPRAAVFTGRLSIRGDMALAARLGDWMYTVVARRAAAGSELQVVARNRWEKDHEAAACAVCHQPFSKVYRRKHHCRFCGRVVCNSCS 168
            Y  D V +++A +R  P  ++F    ++     LA  L D +      +     E+ VV  + W KD E   C +C++ FS ++RR+HHCR CG V+C +CS
Sbjct:  260 YKDDFVTISIAFQRPPPMVSLFRSNPAVEMVTQLARGLRDLLEDPPELQ-----EISVVKTSAWVKDKERRFCVLCNKRFSPIFRRRHHCRTCGEVICWACS 356

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2522.6869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KBB7_9PHAE	2.760e-50	44.79	FYVE-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A7S2V858_9STRA	5.980e-9	32.87	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
K3X1X4_GLOUD	1.150e-8	37.66	FYVE-type domain-containing protein n=1 Tax=Globis...	[more]
A0A7S0K532_CAFRO	1.860e-8	43.94	Hypothetical protein (Fragment) n=1 Tax=Cafeteria ...	[more]
H3GSH1_PHYRM	2.520e-8	31.86	FYVE-type domain-containing protein n=1 Tax=Phytop...	[more]
A0A1W0A7K2_9STRA	3.280e-8	50.00	Radial spoke head protein n=1 Tax=Thraustotheca cl...	[more]
A0A6G0LE08_9STRA	8.700e-8	33.33	FYVE-type domain-containing protein n=1 Tax=Phytop...	[more]
A0A6A3LR08_9STRA	9.920e-8	33.33	FYVE-type domain-containing protein n=4 Tax=Phytop...	[more]
W2R4E4_PHYPN	1.010e-7	33.33	FYVE-type domain-containing protein n=36 Tax=Phyto...	[more]
D0MZ17_PHYIT	1.140e-7	33.33	DEAD/DEAH box RNA helicase, putative n=1 Tax=Phyto...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 219..239
None	No IPR available	PANTHER	PTHR23164	EARLY ENDOSOME ANTIGEN 1	coord: 75..177
None	No IPR available	PANTHER	PTHR23164:SF13	E3 UBIQUITIN-PROTEIN LIGASE PIB1	coord: 75..177
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 254..278
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 279..443
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..253
None	No IPR available	TMHMM	TMhelix		coord: 253..275
IPR000306	FYVE zinc finger	SMART	SM00064	fyve_4	coord: 125..187 e-value: 1.1E-12 score: 58.1
IPR000306	FYVE zinc finger	PFAM	PF01363	FYVE	coord: 129..175 e-value: 5.1E-15 score: 55.4
IPR036527	SCP2 sterol-binding domain superfamily	GENE3D	3.30.1050.10		coord: 13..110 e-value: 2.2E-10 score: 42.5
IPR036527	SCP2 sterol-binding domain superfamily	SUPERFAMILY	55718	SCP-like	coord: 29..108
IPR003033	SCP2 sterol-binding domain	PFAM	PF02036	SCP2	coord: 17..104 e-value: 4.6E-11 score: 43.1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 120..202 e-value: 3.8E-15 score: 57.3
IPR017455	Zinc finger, FYVE-related	PROSITE	PS50178	ZF_FYVE	coord: 133..182 score: 11.067
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 125..181

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2522	contig	H-paniculata_contig2522:13303..19288 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2522.6869.1	mRNA_H-paniculata_contig2522.6869.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig2522 12879..19288 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig2522.6869.1 ID=prot_H-paniculata_contig2522.6869.1|Name=mRNA_H-paniculata_contig2522.6869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=443bp
MAQIAESEALIRESAVVAREKAKPDAELLVIKIQIKGVGAWTLDSTGDIR
DQATESDQREANVQLSYVSDDVFVALAHRRMDPRAAVFTGRLSIRGDMAL
AARLGDWMYTVVARRAAAGSELQVVARNRWEKDHEAAACAVCHQPFSKVY
RRKHHCRFCGRVVCNSCSEQKISGQKACKLCKGRADVARLKSQQTLAKDS
AAGRPGRTGESASVAPAELEFLQTRVVELEEQVETLDRRAFAARAVLLRQ
GVLALYRGLALFCLALALLSAHLVAGWLSRGFGPTLFEASVQVPRLSSLS
IWPRGDGVGMNLASTIRKISFSSSAASKANTSSSKMAVTSTPVEDPVKDI
AVSTSISTSSSSSSGESRRNGDTTGIYYSEPACRTTNSAGELAGGSDSRC
HGEYTTAADTAAANSGIILKPELTGAGKQKEGEDEGNGAGTQG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000306	Znf_FYVE
IPR036527	SCP2_sterol-bd_dom_sf
IPR003033	SCP2_sterol-bd_dom
IPR013083	Znf_RING/FYVE/PHD
IPR017455	Znf_FYVE-rel
IPR011011	Znf_FYVE_PHD