prot_H-paniculata_contig25149.6845.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25149.6845.1
Unique Nameprot_H-paniculata_contig25149.6845.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length59
Homology
BLAST of mRNA_H-paniculata_contig25149.6845.1 vs. uniprot
Match: D8LEC5_ECTSI (Tup_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC5_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 2.340e-22
Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    1 GAQSEVYSLDWVSTMIASGSGDGRIRLWNSVTGECQASLGDSAGPRDGVTSVVLKQ 56
            G +SEVYSLDWVS MIASGSGDGRIRLW+SVTG C+ASLGD  GP+DGVTSVVL+Q
Sbjct:  583 GHESEVYSLDWVSDMIASGSGDGRIRLWDSVTGACKASLGDMGGPQDGVTSVVLRQ 638          
BLAST of mRNA_H-paniculata_contig25149.6845.1 vs. uniprot
Match: A0A835Z1H0_9STRA (TUP1-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H0_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.380e-14
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    1 GAQSEVYSLDWVSTMIASGSGDGRIRLWNSVTGECQASLGDSAGPRDGVTSVVLK 55
            G QSEVYSLDWV  +IA+GSGD ++R+W+S +G C+  LGDS GP DGVT V  +
Sbjct:  110 GHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLGDSRGPTDGVTCVAFR 164          
BLAST of mRNA_H-paniculata_contig25149.6845.1 vs. uniprot
Match: A0A662WIH0_9STRA (Tup_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIH0_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.590e-11
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    1 GAQSEVYSLDWVSTMIASGSGDGRIRLWNSVTGECQASLG-DSAGPRDGVTSVVL 54
            G +SE+YSLD+V+ +I SGSGD ++RLW+S  G+C+   G +S GP DGVTSV L
Sbjct:  518 GHESEIYSLDYVNDLIVSGSGDRKVRLWDSRNGQCKKIFGNESGGPSDGVTSVAL 572          
BLAST of mRNA_H-paniculata_contig25149.6845.1 vs. uniprot
Match: A0A662XMC3_9STRA (Tup_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMC3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.590e-11
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    1 GAQSEVYSLDWVSTMIASGSGDGRIRLWNSVTGECQASLG-DSAGPRDGVTSVVL 54
            G +SE+YSLD+V+ +I SGSGD ++RLW+S  G+C+   G +S GP DGVTSV L
Sbjct:  517 GHESEIYSLDYVNDLIVSGSGDRKVRLWDSRNGQCKKIFGNESGGPSDGVTSVAL 571          
BLAST of mRNA_H-paniculata_contig25149.6845.1 vs. uniprot
Match: A0A024GJE4_9STRA (Tup_N domain-containing protein n=7 Tax=Albugo TaxID=65356 RepID=A0A024GJE4_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.960e-11
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 GAQSEVYSLDWVSTMIASGSGDGRIRLWNSVTGECQASLG-DSAGPRDGVTSVVL 54
            G +SE+YSLD+VS +I SGSGD +IRLW++ T +C    G +S GP DGVTSV L
Sbjct:  433 GHESEIYSLDYVSDLIVSGSGDRKIRLWDARTSQCTKIFGSESGGPSDGVTSVAL 487          
BLAST of mRNA_H-paniculata_contig25149.6845.1 vs. uniprot
Match: A0A8K1CE16_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE16_PYTOL)

HSP 1 Score: 51.6 bits (122), Expect = 4.300e-6
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    6 VYSLDWVSTMIASGSGDGRIRLWNSVTGECQASLGDSAGPRDGVTSVVL 54
            VYSL +V  +IASGSGD  +RLW++ +  C+A      GP DGVTSV L
Sbjct:  357 VYSLGYVDHLIASGSGDRTVRLWDARSASCRAVFD---GPTDGVTSVAL 402          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25149.6845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LEC5_ECTSI2.340e-2282.14Tup_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835Z1H0_9STRA3.380e-1460.00TUP1-like protein (Fragment) n=1 Tax=Tribonema min... [more]
A0A662WIH0_9STRA1.590e-1156.36Tup_N domain-containing protein n=1 Tax=Nothophyto... [more]
A0A662XMC3_9STRA1.590e-1156.36Tup_N domain-containing protein n=1 Tax=Nothophyto... [more]
A0A024GJE4_9STRA2.960e-1158.18Tup_N domain-containing protein n=7 Tax=Albugo Tax... [more]
A0A8K1CE16_PYTOL4.300e-653.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..56
e-value: 1.2E-10
score: 42.6
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 16..30
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..38
score: 10.443
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..38
score: 10.876
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25149contigH-paniculata_contig25149:2628..2804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25149.6845.1mRNA_H-paniculata_contig25149.6845.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25149 2628..2804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25149.6845.1 ID=prot_H-paniculata_contig25149.6845.1|Name=mRNA_H-paniculata_contig25149.6845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bp
GAQSEVYSLDWVSTMIASGSGDGRIRLWNSVTGECQASLGDSAGPRDGVT
SVVLKQVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
IPR036322WD40_repeat_dom_sf