prot_H-paniculata_contig25070.6821.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25070.6821.1
Unique Nameprot_H-paniculata_contig25070.6821.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
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BLAST of mRNA_H-paniculata_contig25070.6821.1 vs. uniprot
Match: D7G3U1_ECTSI (Sphingosine-1-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U1_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 4.180e-27
Identity = 55/76 (72.37%), Postives = 60/76 (78.95%), Query Frame = 0 
Query:    1 VAGYLLGGILLGFWLIFGGAVDAFIVGNPWAWLAVLAAGGAVIFAYPYDPKRWTDSYGDTALIVATATGFLEAYCL 76
            +AGYLLGG LL FWL FGGAVDAFIVGNP AWL VL   G  I AYP  PK+WT+S+GDT +IVATA GFLEA CL
Sbjct:  231 LAGYLLGGFLLTFWLAFGGAVDAFIVGNPMAWLVVLGGAGGAILAYPC-PKKWTNSFGDTVIIVATAAGFLEACCL 305
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BLAST of mRNA_H-paniculata_contig25070.6821.1 vs. uniprot
Match: A0A6H5KSD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD3_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.040e-9
Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:   31 AWLAVLAAGGAVIFAYPYDPKRWTDSYGDTALIVATATGFLEA 73
            AWL VL   G  I AYP  PKRWT+S+GDT +IVATA GFLEA
Sbjct:   23 AWLIVLGGAGGAILAYPC-PKRWTNSFGDTVIIVATAAGFLEA 64
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25070.6821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3U1_ECTSI4.180e-2772.37Sphingosine-1-phosphate phosphatase n=1 Tax=Ectoca... [more]
A0A6H5KSD3_9PHAE1.040e-967.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 31..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25070contigH-paniculata_contig25070:2869..3420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25070.6821.1mRNA_H-paniculata_contig25070.6821.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25070 2867..3420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25070.6821.1 ID=prot_H-paniculata_contig25070.6821.1|Name=mRNA_H-paniculata_contig25070.6821.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
VAGYLLGGILLGFWLIFGGAVDAFIVGNPWAWLAVLAAGGAVIFAYPYDP
KRWTDSYGDTALIVATATGFLEAYCLA
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